Literature DB >> 24907321

Use of silica-encapsulated Pseudomonas sp. strain NCIB 9816-4 in biodegradation of novel hydrocarbon ring structures found in hydraulic fracturing waters.

Kelly G Aukema1, Lisa Kasinkas2, Alptekin Aksan2, Lawrence P Wackett3.   

Abstract

The most problematic hydrocarbons in hydraulic fracturing (fracking) wastewaters consist of fused, isolated, bridged, and spiro ring systems, and ring systems have been poorly studied with respect to biodegradation, prompting the testing here of six major ring structural subclasses using a well-characterized bacterium and a silica encapsulation system previously shown to enhance biodegradation. The direct biological oxygenation of spiro ring compounds was demonstrated here. These and other hydrocarbon ring compounds have previously been shown to be present in flow-back waters and waters produced from hydraulic fracturing operations. Pseudomonas sp. strain NCIB 9816-4, containing naphthalene dioxygenase, was selected for its broad substrate specificity, and it was demonstrated here to oxidize fundamental ring structures that are common in shale-derived waters but not previously investigated with this or related enzymes. Pseudomonas sp. NCIB 9816-4 was tested here in the presence of a silica encasement, a protocol that has previously been shown to protect bacteria against the extremes of salinity present in fracking wastewaters. These studies demonstrate the degradation of highly hydrophobic compounds by a silica-encapsulated model bacterium, demonstrate what it may not degrade, and contribute to knowledge of the full range of hydrocarbon ring compounds that can be oxidized using Pseudomonas sp. NCIB 9816-4.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 24907321      PMCID: PMC4135751          DOI: 10.1128/AEM.01100-14

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  28 in total

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Journal:  J Am Chem Soc       Date:  2007-03-07       Impact factor: 15.419

3.  Stereochemical course of two arene-cis-diol dehydrogenases specifically induced in Pseudomonas putida.

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Journal:  J Bacteriol       Date:  1997-06       Impact factor: 3.490

4.  Regio- and stereospecific oxidation of fluorene, dibenzofuran, and dibenzothiophene by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4.

Authors:  S M Resnick; D T Gibson
Journal:  Appl Environ Microbiol       Date:  1996-11       Impact factor: 4.792

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Journal:  J Bacteriol       Date:  2006-10       Impact factor: 3.490

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Journal:  J Bacteriol       Date:  1995-05       Impact factor: 3.490

7.  Dissipation and metabolism of (14)C-spiroxamine in soil under laboratory condition.

Authors:  Premasis Sukul; Sebastian Zühlke; Marc Lamshöft; Noelia Rosales-Conrado; Michael Spiteller
Journal:  Environ Pollut       Date:  2010-01-08       Impact factor: 8.071

8.  Regio- and stereospecific oxidation of 9,10-dihydroanthracene and 9,10-dihydrophenanthrene by naphthalene dioxygenase: structure and absolute stereochemistry of metabolites.

Authors:  S M Resnick; D T Gibson
Journal:  Appl Environ Microbiol       Date:  1996-09       Impact factor: 4.792

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Journal:  Structure       Date:  1998-05-15       Impact factor: 5.006

10.  Hydroxylated polychlorinated biphenyl detection based on a genetically engineered bioluminescent whole-cell sensing system.

Authors:  Kendrick Turner; Shifen Xu; Patrizia Pasini; Sapna Deo; Leonidas Bachas; Sylvia Daunert
Journal:  Anal Chem       Date:  2007-06-30       Impact factor: 6.986

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  6 in total

1.  Rate-Determining Attack on Substrate Precedes Rieske Cluster Oxidation during Cis-Dihydroxylation by Benzoate Dioxygenase.

Authors:  Brent S Rivard; Melanie S Rogers; Daniel J Marell; Matthew B Neibergall; Sarmistha Chakrabarty; Christopher J Cramer; John D Lipscomb
Journal:  Biochemistry       Date:  2015-07-21       Impact factor: 3.162

2.  OleA Glu117 is key to condensation of two fatty-acyl coenzyme A substrates in long-chain olefin biosynthesis.

Authors:  Matthew R Jensen; Brandon R Goblirsch; James K Christenson; Morgan A Esler; Fatuma A Mohamed; Lawrence P Wackett; Carrie M Wilmot
Journal:  Biochem J       Date:  2017-11-10       Impact factor: 3.857

3.  Signal Disruption Leads to Changes in Bacterial Community Population.

Authors:  Michael Schwab; Celine Bergonzi; Jonathan Sakkos; Christopher Staley; Qian Zhang; Michael J Sadowsky; Alptekin Aksan; Mikael Elias
Journal:  Front Microbiol       Date:  2019-03-29       Impact factor: 5.640

4.  Prediction of Ligand Transport along Hydrophobic Enzyme Nanochannels.

Authors:  Diego E Escalante; Alptekin Aksan
Journal:  Comput Struct Biotechnol J       Date:  2019-06-11       Impact factor: 7.271

5.  Silica ecosystem for synergistic biotransformation.

Authors:  Baris R Mutlu; Jonathan K Sakkos; Sujin Yeom; Lawrence P Wackett; Alptekin Aksan
Journal:  Sci Rep       Date:  2016-06-06       Impact factor: 4.379

6.  Toward Bioremediation of Methylmercury Using Silica Encapsulated Escherichia coli Harboring the mer Operon.

Authors:  Aunica L Kane; Basem Al-Shayeb; Patrick V Holec; Srijay Rajan; Nicholas E Le Mieux; Stephen C Heinsch; Sona Psarska; Kelly G Aukema; Casim A Sarkar; Edward A Nater; Jeffrey A Gralnick
Journal:  PLoS One       Date:  2016-01-13       Impact factor: 3.240

  6 in total

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