Literature DB >> 24907266

Description of Domibacillus indicus sp. nov., isolated from ocean sediments and emended description of the genus Domibacillus.

Avinash Sharma1, Sunil Kumar Dhar1, Om Prakash1, Venkata Ramana Vemuluri1, Vishal Thite1, Yogesh S Shouche1.   

Abstract

A novel Gram-stain-positive, spore-forming, aerobic, non-motile, rod-shaped bacterium designated strain SD111(T) that forms red-pigmented colonies was isolated from a marine sediment sample (collected from 5 m depth) from Lakshadweep, India. Strain SD111(T) grew well on seawater agar at pH 6-10 (optimum pH 7.5±0.2). It showed maximum (97.6 %) 16S rRNA gene sequence similarity and formed a monophyletic clade with Domibacillus robiginosus WS 4628(T) ( = DSM 25058(T)). The genomic DNA G+C content was 37.4 mol% and the strain showed 37.7 % DNA-DNA relatedness to D. robiginosus DSM 25058(T). The major fatty acids were anteiso-C15 : 0, C16 : 0, iso-C15 : 0 and iso-C16 : 0 and MK-6 was the predominant quinone. The polar lipid profile of strain SD111(T) consisted of unidentified phospholipids (PL1 and PL2), phosphatidylglycerol (PG) and diphosphatidylglycerol (DPG). The cell wall contained meso-diaminopimelic acid and the peptidoglycan was of A1γ type. Glucose and ribose were detected as major cell-wall sugars. Results from polyphasic studies indicated that SD111(T) represents a novel species of the genus Domibacillus for which the name Domibacillus indicus sp. nov. is proposed. The type strain is SD111(T) ( = MCC 2255(T) = DSM 28032(T)).
© 2014 IUMS.

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Year:  2014        PMID: 24907266     DOI: 10.1099/ijs.0.064295-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Natronococcus pandeyae sp. nov., a Novel Haloarchaeon from Sambhar Salt Lake.

Authors:  Swapnil Kajale; Neelima Deshpande; Tushar Lodha; Yogesh Shouche; Avinash Sharma
Journal:  Curr Microbiol       Date:  2022-01-04       Impact factor: 2.188

2.  Prokaryotic diversity of tropical coastal sand dunes ecosystem using metagenomics.

Authors:  Sulochana A Shet; Sandeep Garg
Journal:  3 Biotech       Date:  2021-05-04       Impact factor: 2.406

3.  Insights into Diversity and Imputed Metabolic Potential of Bacterial Communities in the Continental Shelf of Agatti Island.

Authors:  Shreyas V Kumbhare; Dhiraj P Dhotre; Sunil Kumar Dhar; Kunal Jani; Deepak A Apte; Yogesh S Shouche; Avinash Sharma
Journal:  PLoS One       Date:  2015-06-11       Impact factor: 3.240

4.  Biology and survival of extremely halophilic archaeon Haloarcula marismortui RR12 isolated from Mumbai salterns, India in response to salinity stress.

Authors:  Rebecca S Thombre; Vinaya D Shinde; Radhika S Oke; Sunil Kumar Dhar; Yogesh S Shouche
Journal:  Sci Rep       Date:  2016-05-27       Impact factor: 4.379

  4 in total

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