Literature DB >> 24893114

Sparse deconvolution in one and two dimensions: applications in endocrinology and single-molecule fluorescence imaging.

Johan J de Rooi1, Cyril Ruckebusch, Paul H C Eilers.   

Abstract

Deconvolution of noisy signals is an important task in analytical chemistry, examples being spectral deconvolution or deconvolution in microscopy. When the number of spectral peaks or single emitters in imaging is limited, the solution of the deconvolution is required to be sparse, and desirable results are obtained using a penalized estimation techniques. We impose sparseness by using penalized regression with a penalty based on the L0-norm, as discussed in earlier work. Several extensions to this approach are presented. Results are demonstrated on pulse identification in endocrine data where the aim is to model the secretion pattern as a sparse series of spikes. An application in single-molecule fluorescence imaging demonstrates the algorithm when applied to two-dimensional data.

Mesh:

Year:  2014        PMID: 24893114     DOI: 10.1021/ac500260h

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  3 in total

1.  Fast and simple super-resolution with single images.

Authors:  Paul H C Eilers; Cyril Ruckebusch
Journal:  Sci Rep       Date:  2022-07-04       Impact factor: 4.996

2.  An Adaptive Ridge Procedure for L0 Regularization.

Authors:  Florian Frommlet; Grégory Nuel
Journal:  PLoS One       Date:  2016-02-05       Impact factor: 3.240

3.  Sparse deconvolution of high-density super-resolution images.

Authors:  Siewert Hugelier; Johan J de Rooi; Romain Bernex; Sam Duwé; Olivier Devos; Michel Sliwa; Peter Dedecker; Paul H C Eilers; Cyril Ruckebusch
Journal:  Sci Rep       Date:  2016-02-25       Impact factor: 4.379

  3 in total

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