Literature DB >> 2488478

A tree reconstruction method that is economical in the number of pairwise comparisons used.

J Hein1.   

Abstract

A fast method for reconstructing phylogenies from distance data is presented. The method is economical in the number of pairwise comparisons needed. It can be combined with a new phylogenetic alignment procedure to yield an algorithm that gives a complete history of a set of homologous sequences. The method is applicable to very large distance matrices. An auxiliary program was developed that simplifies large phylogenies without ignoring biologically essential features. A set of 213 globins from vertebrates, plants, and Vitreoscilla (a prokaryote) were analyzed using this method.

Mesh:

Year:  1989        PMID: 2488478     DOI: 10.1093/oxfordjournals.molbev.a040578

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  9 in total

Review 1.  Evolution of genes and taxa: a primer.

Authors:  J J Doyle; B S Gaut
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

2.  copia-like retrotransposons are ubiquitous among plants.

Authors:  D F Voytas; M P Cummings; A Koniczny; F M Ausubel; S R Rodermel
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-01       Impact factor: 11.205

3.  Relationship between the Clostridium perfringens catQ gene product and chloramphenicol acetyltransferases from other bacteria.

Authors:  T L Bannam; J I Rood
Journal:  Antimicrob Agents Chemother       Date:  1991-03       Impact factor: 5.191

4.  A survey of multiple sequence comparison methods.

Authors:  S C Chan; A K Wong; D K Chiu
Journal:  Bull Math Biol       Date:  1992-07       Impact factor: 1.758

5.  Molecular cloning of a mammalian ABC transporter homologous to Drosophila white gene.

Authors:  S Savary; F Denizot; M Luciani; M Mattei; G Chimini
Journal:  Mamm Genome       Date:  1996-09       Impact factor: 2.957

6.  Peripartum bacteremias due to Leptotrichia amnionii and Sneathia sanguinegens, rare causes of fever during and after delivery.

Authors:  S J De Martino; I Mahoudeau; J P Brettes; Y Piemont; H Monteil; B Jaulhac
Journal:  J Clin Microbiol       Date:  2004-12       Impact factor: 5.948

7.  Evolution of porcine reproductive and respiratory syndrome virus during sequential passages in pigs.

Authors:  C-C Chang; K-J Yoon; J J Zimmerman; K M Harmon; P M Dixon; C M T Dvorak; M P Murtaugh
Journal:  J Virol       Date:  2002-05       Impact factor: 5.103

8.  Detection of human papillomavirus (HPV) type 47 DNA in malignant lesions from epidermodysplasia verruciformis by protocols for precise typing of related HPV DNAs.

Authors:  A Adachi; T Kiyono; Y Hayashi; M Ohashi; M Ishibashi
Journal:  J Clin Microbiol       Date:  1996-02       Impact factor: 5.948

9.  Molecular phylogeny of pearl oysters and their relatives (Mollusca, Bivalvia, Pterioidea).

Authors:  Ilya Tëmkin
Journal:  BMC Evol Biol       Date:  2010-11-08       Impact factor: 3.260

  9 in total

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