Literature DB >> 24880105

High-throughput epitope binning of therapeutic monoclonal antibodies: why you need to bin the fridge.

Benjamin D Brooks1, Adam R Miles2, Yasmina N Abdiche3.   

Abstract

Analytical tools are evolving to meet the need for the higher-throughput characterization of therapeutic monoclonal antibodies. An antibody's epitope is arguably its most important property because it underpins its functional activity but, because epitope selection is innate, it remains an empirical process. Here, we focus on the emergence of label-free biosensors with throughput capabilities orders of magnitude higher than the previous state-of-the-art, which can facilitate large assays such as epitope binning so that they can be incorporated alongside functional activity screens, enabling the rapid identification of leads that exhibit unique and functional epitopes. In addition to streamlining the drug development process by saving time and cost, the information from epitope binning assays could provide the basis for intellectual property protection.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24880105     DOI: 10.1016/j.drudis.2014.05.011

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  8 in total

1.  Learning context-aware structural representations to predict antigen and antibody binding interfaces.

Authors:  Srivamshi Pittala; Chris Bailey-Kellogg
Journal:  Bioinformatics       Date:  2020-07-01       Impact factor: 6.937

2.  Computational epitope binning reveals functional equivalence of sequence-divergent paratopes.

Authors:  Jarjapu Mahita; Dong-Gun Kim; Sumin Son; Yoonjoo Choi; Hak-Sung Kim; Chris Bailey-Kellogg
Journal:  Comput Struct Biotechnol J       Date:  2022-04-30       Impact factor: 6.155

3.  Localization of the Interaction Site of Herpes Simplex Virus Glycoprotein D (gD) on the Membrane Fusion Regulator, gH/gL.

Authors:  Tina M Cairns; Doina Atanasiu; Wan Ting Saw; Huan Lou; J Charles Whitbeck; Noah T Ditto; Birgitte Bruun; Helena Browne; Lucas Bennett; Chun Wu; Claude Krummenacher; Benjamin D Brooks; Roselyn J Eisenberg; Gary H Cohen
Journal:  J Virol       Date:  2020-09-29       Impact factor: 5.103

4.  Global sensing of the antigenic structure of herpes simplex virus gD using high-throughput array-based SPR imaging.

Authors:  Tina M Cairns; Noah T Ditto; Huan Lou; Benjamin D Brooks; Doina Atanasiu; Roselyn J Eisenberg; Gary H Cohen
Journal:  PLoS Pathog       Date:  2017-06-14       Impact factor: 6.823

5.  Rare, high-affinity mouse anti-PD-1 antibodies that function in checkpoint blockade, discovered using microfluidics and molecular genomics.

Authors:  Adam S Adler; Rena A Mizrahi; Matthew J Spindler; Matthew S Adams; Michael A Asensio; Robert C Edgar; Jackson Leong; Renee Leong; David S Johnson
Journal:  MAbs       Date:  2017-08-28       Impact factor: 5.857

6.  Rapid exploration of the epitope coverage produced by an Ebola survivor to guide the discovery of therapeutic antibody cocktails.

Authors:  Tom Z Yuan; Ana G Lujan Hernandez; Erica Keane; Qiang Liu; Fumiko Axelrod; Shweta Kailasan; Madeleine Noonan-Shueh; Mohammad Javad Aman; Aaron K Sato; Yasmina N Abdiche
Journal:  Antib Ther       Date:  2020-08-01

7.  Computationally-driven identification of antibody epitopes.

Authors:  Casey K Hua; Albert T Gacerez; Charles L Sentman; Margaret E Ackerman; Yoonjoo Choi; Chris Bailey-Kellogg
Journal:  Elife       Date:  2017-12-04       Impact factor: 8.140

8.  Characterizing Epitope Binding Regions of Entire Antibody Panels by Combining Experimental and Computational Analysis of Antibody: Antigen Binding Competition.

Authors:  Benjamin D Brooks; Adam Closmore; Juechen Yang; Michael Holland; Tina Cairns; Gary H Cohen; Chris Bailey-Kellogg
Journal:  Molecules       Date:  2020-08-11       Impact factor: 4.411

  8 in total

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