Literature DB >> 24866189

Exploring new models of easiRNA biogenesis.

Alexis Sarazin1, Olivier Voinnet1.   

Abstract

Although silent transposons in plants can be reactivated by stress or during development, their potential deleterious effects are prevented by transposon-derived epigenetically activated small interfering RNAs (easiRNAs). A new study shows how serendipitous interactions between reactivated transposons and endogenous microRNAs might initiate easiRNA biogenesis, establishing an unexpected link between these two classes of silencing small RNAs.

Mesh:

Substances:

Year:  2014        PMID: 24866189     DOI: 10.1038/ng.2993

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  15 in total

1.  22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants.

Authors:  Ho-Ming Chen; Li-Teh Chen; Kanu Patel; Yi-Hang Li; David C Baulcombe; Shu-Hsing Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

2.  Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana.

Authors:  Edwards Allen; Zhixin Xie; Adam M Gustafson; Gi-Ho Sung; Joseph W Spatafora; James C Carrington
Journal:  Nat Genet       Date:  2004-11-21       Impact factor: 38.330

3.  Spatio-temporal accumulation of microRNAs is highly coordinated in developing plant tissues.

Authors:  Anna Válóczi; Eva Várallyay; Sakari Kauppinen; József Burgyán; Zoltán Havelda
Journal:  Plant J       Date:  2006-07       Impact factor: 6.417

Review 4.  Origin, biogenesis, and activity of plant microRNAs.

Authors:  Olivier Voinnet
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

Review 5.  Use, tolerance and avoidance of amplified RNA silencing by plants.

Authors:  Olivier Voinnet
Journal:  Trends Plant Sci       Date:  2008-06-17       Impact factor: 18.313

6.  The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs.

Authors:  Saivageethi Nuthikattu; Andrea D McCue; Kaushik Panda; Dalen Fultz; Christopher DeFraia; Erica N Thomas; R Keith Slotkin
Journal:  Plant Physiol       Date:  2013-03-29       Impact factor: 8.340

Review 7.  DNA methylation as a system of plant genomic immunity.

Authors:  M Yvonne Kim; Daniel Zilberman
Journal:  Trends Plant Sci       Date:  2014-03-04       Impact factor: 18.313

Review 8.  Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks.

Authors:  Qili Fei; Rui Xia; Blake C Meyers
Journal:  Plant Cell       Date:  2013-07-23       Impact factor: 11.277

9.  In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA.

Authors:  Eneida Abreu Parizotto; Patrice Dunoyer; Nadia Rahm; Christophe Himber; Olivier Voinnet
Journal:  Genes Dev       Date:  2004-09-01       Impact factor: 11.361

10.  miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis.

Authors:  Kate M Creasey; Jixian Zhai; Filipe Borges; Frederic Van Ex; Michael Regulski; Blake C Meyers; Robert A Martienssen
Journal:  Nature       Date:  2014-03-16       Impact factor: 49.962

View more
  3 in total

1.  Evolutionary history of double-stranded RNA binding proteins in plants: identification of new cofactors involved in easiRNA biogenesis.

Authors:  Marion Clavel; Thierry Pélissier; Thomas Montavon; Marie-Aude Tschopp; Marie-Noëlle Pouch-Pélissier; Julie Descombin; Viviane Jean; Patrice Dunoyer; Cécile Bousquet-Antonelli; Jean-Marc Deragon
Journal:  Plant Mol Biol       Date:  2016-02-09       Impact factor: 4.076

2.  Genome-wide identification of endogenous RNA-directed DNA methylation loci associated with abundant 21-nucleotide siRNAs in Arabidopsis.

Authors:  Jian-Hua Zhao; Yuan-Yuan Fang; Cheng-Guo Duan; Rong-Xiang Fang; Shou-Wei Ding; Hui-Shan Guo
Journal:  Sci Rep       Date:  2016-10-27       Impact factor: 4.379

3.  Innate, translation-dependent silencing of an invasive transposon in Arabidopsis.

Authors:  Stefan Oberlin; Rajendran Rajeswaran; Marieke Trasser; Verónica Barragán-Borrero; Michael A Schon; Alexandra Plotnikova; Lukas Loncsek; Michael D Nodine; Arturo Marí-Ordóñez; Olivier Voinnet
Journal:  EMBO Rep       Date:  2021-12-21       Impact factor: 8.807

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.