Literature DB >> 24866112

Transcription factor heterogeneity in pluripotent stem cells: a stochastic advantage.

Maria-Elena Torres-Padilla1, Ian Chambers2.   

Abstract

When pluripotent cells are exposed to a uniform culture environment they routinely display heterogeneous gene expression. Aspects of this heterogeneity, such as Nanog expression, are linked to differences in the propensity of individual cells to either self-renew or commit towards differentiation. Recent findings have provided new insight into the underlying causes of this heterogeneity, which we summarise here using Nanog, a key regulator of pluripotency, as a model gene. We discuss the role of transcription factor heterogeneity in facilitating the intrinsically dynamic and stochastic nature of the pluripotency network, which in turn provides a potential benefit to a population of cells that needs to balance cell fate decisions.
© 2014. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Embryonic stem cell (ESC); Epiblast; Heterogeneity; Monoallelic; Pluripotency; Transcription

Mesh:

Substances:

Year:  2014        PMID: 24866112     DOI: 10.1242/dev.102624

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  76 in total

1.  Gene expression pattern of trophoblast-specific transcription factors in trophectoderm by analysis of single-cell RNA-seq data of human blastocyst.

Authors:  Yajun Liu; Yi Zhang; Shiwen Li; Jinquan Cui
Journal:  Funct Integr Genomics       Date:  2021-02-05       Impact factor: 3.410

2.  Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

Authors:  Allon M Klein; Linas Mazutis; Ilke Akartuna; Naren Tallapragada; Adrian Veres; Victor Li; Leonid Peshkin; David A Weitz; Marc W Kirschner
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

Review 3.  Towards Three-Dimensional Dynamic Regulation and In Situ Characterization of Single Stem Cell Phenotype Using Microfluidics.

Authors:  Sébastien Sart; Spiros N Agathos
Journal:  Mol Biotechnol       Date:  2018-11       Impact factor: 2.695

4.  Sirtuin 1 Promotes Deacetylation of Oct4 and Maintenance of Naive Pluripotency.

Authors:  Eric O Williams; Amy K Taylor; Eric L Bell; Rachelle Lim; Daniel M Kim; Leonard Guarente
Journal:  Cell Rep       Date:  2016-10-11       Impact factor: 9.423

Review 5.  Chromatin dynamics in the regulation of cell fate allocation during early embryogenesis.

Authors:  Adam Burton; Maria-Elena Torres-Padilla
Journal:  Nat Rev Mol Cell Biol       Date:  2014-10-10       Impact factor: 94.444

Review 6.  Concise Review: NANOG in Cancer Stem Cells and Tumor Development: An Update and Outstanding Questions.

Authors:  Collene R Jeter; Tao Yang; Junchen Wang; Hsueh-Ping Chao; Dean G Tang
Journal:  Stem Cells       Date:  2015-05-13       Impact factor: 6.277

7.  Dissecting mechanisms of mouse embryonic stem cells heterogeneity through a model-based analysis of transcription factor dynamics.

Authors:  Maria Herberg; Ingmar Glauche; Thomas Zerjatke; Maria Winzi; Frank Buchholz; Ingo Roeder
Journal:  J R Soc Interface       Date:  2016-04       Impact factor: 4.118

Review 8.  Single-Cell and Single-Molecule Analysis of Gene Expression Regulation.

Authors:  Maria Vera; Jeetayu Biswas; Adrien Senecal; Robert H Singer; Hye Yoon Park
Journal:  Annu Rev Genet       Date:  2016-11-23       Impact factor: 16.830

Review 9.  Challenges in long-term imaging and quantification of single-cell dynamics.

Authors:  Stavroula Skylaki; Oliver Hilsenbeck; Timm Schroeder
Journal:  Nat Biotechnol       Date:  2016-11-08       Impact factor: 54.908

10.  Roles for Histone Acetylation in Regulation of Telomere Elongation and Two-cell State in Mouse ES Cells.

Authors:  Jiameng Dan; Jiao Yang; Yifei Liu; Andrew Xiao; Lin Liu
Journal:  J Cell Physiol       Date:  2015-10       Impact factor: 6.384

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