Literature DB >> 24863180

Characterization of a pyridoxal-5'-phosphate-dependent l-lysine decarboxylase/oxidase from Burkholderia sp. AIU 395.

Asami Sugawara1, Daisuke Matsui2, Narumi Takahashi1, Miwa Yamada1, Yasuhisa Asano2, Kimiyasu Isobe3.   

Abstract

A novel enzyme, which catalyzed decarboxylation of l-lysine into cadaverine with release of carbon dioxide and oxidative deamination of l-lysine into l-2-aminoadipic 5-semialdehyde with release of ammonia and hydrogen peroxide, was found from a newly isolated Burkholderia sp. AIU 395. The enzyme was specific to l-lysine and did not exhibit enzyme activities for other l-amino acids, l-lysine derivatives, d-amino acids, and amines. The apparent Km values for l-lysine in the oxidation and decarboxylation reactions were estimated to be 0.44 mM and 0.84 mM, respectively. The molecular mass was estimated to be 150 kDa, which was composed of two identical subunits with molecular mass of 76.5 kDa. The enzyme contained one mol of pyridoxal 5'-phosphate per subunit as a prosthetic group. The enzyme exhibiting decarboxylase and oxidase activities for l-lysine was first reported here, while the deduced amino acid sequence was homologous to that of putative lysine decarboxylases from the genus Burkholderia.
Copyright © 2014 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Burkholderia; Putrescine oxidase; Pyridoxal-5′-phosphate; l-Amino acid decarboxylase; l-Amino acid oxidase; l-Lysine; l-Lysine decarboxylase; l-Lysine oxidase

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Year:  2014        PMID: 24863180     DOI: 10.1016/j.jbiosc.2014.04.013

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  6 in total

1.  Rational identification of aggregation hotspots based on secondary structure and amino acid hydrophobicity.

Authors:  Daisuke Matsui; Shogo Nakano; Mohammad Dadashipour; Yasuhisa Asano
Journal:  Sci Rep       Date:  2017-08-25       Impact factor: 4.379

2.  Identification and molecular characterization of a metagenome-derived L-lysine decarboxylase gene from subtropical soil microorganisms.

Authors:  Jie Deng; Hua Gao; Zhen Gao; Huaxian Zhao; Ying Yang; Qiaofen Wu; Bo Wu; Chengjian Jiang
Journal:  PLoS One       Date:  2017-09-20       Impact factor: 3.240

3.  A Novel Subfamily of Bacterial AAT-Fold Basic Amino Acid Decarboxylases and Functional Characterization of Its First Representative: Pseudomonas aeruginosa LdcA.

Authors:  Diego Carriel; Pierre Simon Garcia; Florence Castelli; Patricia Lamourette; François Fenaille; Céline Brochier-Armanet; Sylvie Elsen; Irina Gutsche
Journal:  Genome Biol Evol       Date:  2018-11-01       Impact factor: 3.416

4.  Biochemical Characterization and Structural Insight into Interaction and Conformation Mechanisms of Serratia marcescens Lysine Decarboxylase (SmcadA).

Authors:  Tolbert Osire; Zhina Qiao; Taowei Yang; Meijuan Xu; Xian Zhang; Zhiming Rao
Journal:  Molecules       Date:  2021-01-29       Impact factor: 4.411

Review 5.  Green chemical and biological synthesis of cadaverine: recent development and challenges.

Authors:  Yuhong Huang; Xiuling Ji; Zhanling Ma; Mateusz Łężyk; Yaju Xue; Hai Zhao
Journal:  RSC Adv       Date:  2021-07-07       Impact factor: 4.036

Review 6.  Oxygen reactivity with pyridoxal 5'-phosphate enzymes: biochemical implications and functional relevance.

Authors:  Giovanni Bisello; Carmen Longo; Giada Rossignoli; Robert S Phillips; Mariarita Bertoldi
Journal:  Amino Acids       Date:  2020-08-25       Impact factor: 3.520

  6 in total

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