| Literature DB >> 24860819 |
Zhaoming Wang1, Lei Zhang2, Xuesong Shi2, Huayu Xu3, Ting Wang4, Jianmin Bian2.
Abstract
BACKGROUND: Recent studies suggested that two common polymorphisms, miR-146a G>C and miR-196a2 C>T, may be associated with individual susceptibility to hepatocellular carcinoma (HCC). However, the results remain conflicting rather than conclusive. Object. The aim of this study was to assess the association between miR-146a G>C and miR-196a2 C>T polymorphisms and the risk of HCC.Entities:
Mesh:
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Year: 2014 PMID: 24860819 PMCID: PMC4016853 DOI: 10.1155/2014/468605
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Figure 1Articles identified with criteria for inclusion and exclusion.
Characteristics of literatures included in the meta-analysis on hepatocellular carcinoma.
| Author | Year | Country | Ethnicity | Source of controls | Genotyping method | Cases/controls | MicroRNA polymorphism | Allele frequency | HWE |
|---|---|---|---|---|---|---|---|---|---|
|
Xu et al. [ | 2008 | China | Asian | Population | PCR-RFLP | 479/504 | miR-146a G>C | 0.36/0.64 | 0.119 |
|
Xu [ | 2010 | China | Asian | Population | PCR-RFLP | 500/522 | miR-146a G>C | 0.39/0.61 | 0.296 |
| 492/495 | miR-196a2 C>T | 0.46/0.54 | 0.621 | ||||||
| Qi et al. [ | 2010 | China | Asian | Population | PCR-LDR | 361/391 | miR-196a2 C>T | 0.49/0.51 | 0.869 |
| Li et al. [ | 2010 | China | Asian | Hospital | PCR-RFLP | 310/222 | miR-196a2 C>T | 0.42/0.58 | 0.402 |
| Wang [ | 2011 | China | Asian | Population | MALDI-TOF | 1116/1869 | miR-146a G>C | 0.39/0.61 | 0.115 |
| Akkiz et al. [ | 2011 | Turkey | Caucasian | Population | PCR-RFLP | 222/222 | miR-146a G>C | 0.80/0.20 | 0.384 |
| Akkiz et al. [ | 2011 | Turkey | Caucasian | Population | PCR-RFLP | 185/185 | miR-196a2 C>T | 0.55/0.45 | 0.492 |
|
Zhang et al. [ | 2011 | China | Asian | Population | PIRA-PCR | 925/840 | miR-146a G>C | 0.41/0.59 | 0.149 |
| 934/837 | miR-196a2 C>T | 0.47/0.53 | 0.972 | ||||||
| Yu [ | 2012 | China | Asian | Population | PCR-RFLP | 100/100 | miR-146a G>C | 0.44/0.56 | 0.506 |
|
Li [ | 2012 | China | Asian | Population | AS-PCR | 560/560 | miR-146a G>C | 0.42/0.58 | 0.196 |
| 560/560 | miR-196a2 C>T | 0.39/0.61 | 0.056 | ||||||
|
Kim et al. [ | 2012 | Korea | Asian | Population | PCR-RFLP | 159/201 | miR-146a G>C | 0.38/0.62 | 0.190 |
| 159/201 | miR-196a2 C>T | 0.49/0.51 | 0.356 | ||||||
| Xiang et al. [ | 2012 | China | Asian | Population | PCR-RFLP | 100/100 | miR-146a G>C | 0.44/0.56 | 0.506 |
| Zhou et al. [ | 2012 | China | Asian | Population | PCR-RFLP | 186/483 | miR-146a G>C | 0.41/0.59 | 0.056 |
| Huang et al. [ | 2013 | China | Asian | Population | MALDI-TOF | 110/110 | miR-146a G>C | 0.32/0.68 | 0.122 |
|
Zhang et al. [ | 2013 | China | Asian | Population | MassArray | 997/998 | miR-146a G>C | 0.39/0.61 | 0.911 |
| 996/995 | miR-196a2 C>T | 0.42/0.58 | 0.245 | ||||||
| Han et al. [ | 2013 | China | Asian | Population | RT-PCR | 1017/1009 | miR-196a2 C>T | 0.46/0.54 | 0.310 |
|
Hao et al. [ | 2013 | China | Asian | Population | PCR-RFLP | 235/281 | miR-146a G>C | 0.38/0.62 | 0.056 |
| 235/281 | miR-196a2 C>T | 0.52/0.48 | 0.051 |
HWE: Hardy-Weinberg equilibrium; PCR: polymerase chain reaction; RFLP: restriction fragment length polymorphism; PIRA: primer introduced restriction analysis; LDR: ligase detection reaction; AS: allele specific; MALDI-TOF: matrix-assisted laser desorption/ionization time-of-flight.
Meta-analysis of the miR-146a G>C polymorphism associated with hepatocellular carcinoma.
| Comparisons | OR | 95% CI |
|
|
|---|---|---|---|---|
| Overall | ||||
| C versus G | 0.883 | 0.839–0.930 | 0.000 | 0.230 |
| CC versus GG | 0.780 | 0.700–0.869 | 0.000 | 0.167 |
| GC versus GG | 0.920 | 0.832–1.017 | 0.104 | 0.199 |
| GC/CC versus GG | 0.865 | 0.787–0.952 | 0.003 | 0.125 |
| CC versus GC/GG | 0.835 | 0.774–0.901 | 0.000 | 0.545 |
| Asian | ||||
| C versus G | 0.878 | 0.834–0.925 | 0.000 | 0.255 |
| CC versus GG | 0.777 | 0.697–0.867 | 0.000 | 0.129 |
| GC versus GG | 0.905 | 0.816–1.004 | 0.060 | 0.216 |
| GC/CC versus GG | 0.850 | 0.771–0.9373 | 0.001 | 0.159 |
| CC versus GC/GG | 0.834 | 0.771–0.901 | 0.000 | 0.461 |
P : P value of Q test for heterogeneity test; OR odds: odds ratio; CI: confidence interval.
Figure 2Forest plot of hepatocellular carcinoma risk associated with the mir-146a G>C polymorphism (CC versus GC/GG) in overall population (a) and in Asian population (b).
Meta-analysis of the miR-196a2 C>T polymorphism associated with hepatocellular carcinoma.
| Comparisons | OR | 95% CI |
|
|
|---|---|---|---|---|
| Overall | ||||
| T versus C | 0.891 | 0.815–0.974 | 0.011 | 0.012 |
| TT versus CC | 0.783 | 0.649–0.943 | 0.010 | 0.007 |
| CT versus CC | 0.831 | 0.714–0.967 | 0.017 | 0.025 |
| CT/TT versus CC | 0.817 | 0.703–0.949 | 0.008 | 0.012 |
| TT versus TC/CC | 0.907 | 0.807 | 1.020 | 0.094 |
| Asian | ||||
| T versus C | 0.910 | 0.837–0.990 | 0.029 | 0.036 |
| TT versus CC | 0.817 | 0.684–0.976 | 0.026 | 0.021 |
| CT versus CC | 0.838 | 0.712–0.98 | 0.033 | 0.017 |
| CT/TT versus CC | 0.833 | 0.712–0.974 | 0.022 | 0.012 |
| TT versus TC/CC | 0.935 | 0.846–1.032 | 0.181 | 0.270 |
P : P value of Q test for heterogeneity test; OR odds: odds ratio; CI: confidence interval; random-effects model was used when P ≦0.10; otherwise, fix-effects model was used.
Metaregression analysis for heterogeneity in studies on the miR-196a2 C>T polymorphism associated with hepatocellular carcinoma.
| Sort |
|
|
|
|---|---|---|---|
| Ethnicity | 0.119 | 0.0078 | 51.50% |
| Source of controls | 0.287 | 0.0097 | 56.48% |
| Genotyping method | 0.382 | 0.0134 | 61.50% |
| Year | 0.976 | 0.1454 | 62.34% |
| Sample size | 0.397 | 0.1194 | 58.59% |
Figure 3Sensitivity analysis for mir-146a G>C polymorphism with hepatocellular carcinoma (CC versus GC/GG).
Figure 4Begg's funnel plot for publication bias test for mir-146a G>C polymorphism with hepatocellular carcinoma in overall population (a) and in Asian population (b). s.e.: Standard Error; logor: logOR (logarithms of Odds Ratio).