Literature DB >> 24860621

Systemic lupus erythematosus diagnostics in the 'omics' era.

Cristina Arriens1, Chandra Mohan2.   

Abstract

Systemic lupus erythematosus is a complex autoimmune disease affecting multiple organ systems. Currently, diagnosis relies upon meeting at least four out of eleven criteria outlined by the ACR. The scientific community actively pursues discovery of novel diagnostics in the hope of better identifying susceptible individuals in early stages of disease. Comprehensive studies have been conducted at multiple biological levels including: DNA (or genomics), mRNA (or transcriptomics), protein (or proteomics) and metabolites (or metabolomics). The 'omics' platforms allow us to re-examine systemic lupus erythematosus at a greater degree of molecular resolution. More importantly, one is hopeful that these 'omics' platforms may yield newer biomarkers for systemic lupus erythematosus that can help clinicians track the disease course with greater sensitivity and specificity.

Entities:  

Keywords:  epigenomics; genomics; metabolomics; proteomics; systemic lupus erythematosus; transcriptomics

Year:  2013        PMID: 24860621      PMCID: PMC4029501          DOI: 10.2217/ijr.13.59

Source DB:  PubMed          Journal:  Int J Clin Rheumtol        ISSN: 1758-4280


  148 in total

1.  Novel systemic lupus erythematosus autoantigens identified by human protein microarray technology.

Authors:  Wei Huang; Chaojun Hu; Haipan Zeng; Ping Li; Lei Guo; Xiaofeng Zeng; Guozhen Liu; Fengchun Zhang; Yongzhe Li; Lin Wu
Journal:  Biochem Biophys Res Commun       Date:  2012-01-09       Impact factor: 3.575

2.  Genome-wide profiling of target genes for the systemic lupus erythematosus-associated transcription factors IRF5 and STAT4.

Authors:  Chuan Wang; Johanna K Sandling; Niklas Hagberg; Olof Berggren; Snaevar Sigurdsson; Olof Karlberg; Lars Rönnblom; Maija-Leena Eloranta; Ann-Christine Syvänen
Journal:  Ann Rheum Dis       Date:  2012-06-23       Impact factor: 19.103

3.  Circulating microRNAs as candidate biomarkers in patients with systemic lupus erythematosus.

Authors:  Honglei Wang; Wujian Peng; Xin Ouyang; Wuxian Li; Yong Dai
Journal:  Transl Res       Date:  2012-05-04       Impact factor: 7.012

4.  Association of genetic variations in the STAT4 and IRF7/KIAA1542 regions with systemic lupus erythematosus in a Northern Han Chinese population.

Authors:  Ping Li; Chunwei Cao; Haixia Luan; Chaohua Li; Chaojun Hu; Shulan Zhang; Xiaofeng Zeng; Fengchun Zhang; Changqing Zeng; Yongzhe Li
Journal:  Hum Immunol       Date:  2010-12-15       Impact factor: 2.850

5.  Sialic acid-binding Ig-like lectin 1 expression in inflammatory and resident monocytes is a potential biomarker for monitoring disease activity and success of therapy in systemic lupus erythematosus.

Authors:  Robert Biesen; Cemal Demir; Fidan Barkhudarova; Joachim R Grün; Marta Steinbrich-Zöllner; Marina Backhaus; Thomas Häupl; Martin Rudwaleit; Gabriela Riemekasten; Andreas Radbruch; Falk Hiepe; Gerd-Rüdiger Burmester; Andreas Grützkau
Journal:  Arthritis Rheum       Date:  2008-04

6.  Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.

Authors:  Geoffrey Hom; Robert R Graham; Barmak Modrek; Kimberly E Taylor; Ward Ortmann; Sophie Garnier; Annette T Lee; Sharon A Chung; Ricardo C Ferreira; P V Krishna Pant; Dennis G Ballinger; Roman Kosoy; F Yesim Demirci; M Ilyas Kamboh; Amy H Kao; Chao Tian; Iva Gunnarsson; Anders A Bengtsson; Solbritt Rantapää-Dahlqvist; Michelle Petri; Susan Manzi; Michael F Seldin; Lars Rönnblom; Ann-Christine Syvänen; Lindsey A Criswell; Peter K Gregersen; Timothy W Behrens
Journal:  N Engl J Med       Date:  2008-01-20       Impact factor: 91.245

7.  Genetic deficiency of C4, C2 or C1q and lupus syndromes. Association with anti-Ro (SS-A) antibodies.

Authors:  O Meyer; G Hauptmann; G Tappeiner; H D Ochs; F Mascart-Lemone
Journal:  Clin Exp Immunol       Date:  1985-12       Impact factor: 4.330

8.  Abnormal histone modification patterns in lupus CD4+ T cells.

Authors:  Nan Hu; Xiangning Qiu; Yongqi Luo; Jun Yuan; Yaping Li; Wenzhi Lei; Guiying Zhang; Ying Zhou; Yuwen Su; Qianjin Lu
Journal:  J Rheumatol       Date:  2008-04-01       Impact factor: 4.666

9.  Differential genetic associations for systemic lupus erythematosus based on anti-dsDNA autoantibody production.

Authors:  Sharon A Chung; Kimberly E Taylor; Robert R Graham; Joanne Nititham; Annette T Lee; Ward A Ortmann; Chaim O Jacob; Marta E Alarcón-Riquelme; Betty P Tsao; John B Harley; Patrick M Gaffney; Kathy L Moser; Michelle Petri; F Yesim Demirci; M Ilyas Kamboh; Susan Manzi; Peter K Gregersen; Carl D Langefeld; Timothy W Behrens; Lindsey A Criswell
Journal:  PLoS Genet       Date:  2011-03-03       Impact factor: 5.917

10.  High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions.

Authors:  Lisa F Barcellos; Suzanne L May; Patricia P Ramsay; Hong L Quach; Julie A Lane; Joanne Nititham; Janelle A Noble; Kimberly E Taylor; Diana L Quach; Sharon A Chung; Jennifer A Kelly; Kathy L Moser; Timothy W Behrens; Michael F Seldin; Glenys Thomson; John B Harley; Patrick M Gaffney; Lindsey A Criswell
Journal:  PLoS Genet       Date:  2009-10-23       Impact factor: 5.917

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  19 in total

Review 1.  Diagnostic and prognostic tests in systemic lupus erythematosus.

Authors:  Natalia Vasquez-Canizares; Dawn Wahezi; Chaim Putterman
Journal:  Best Pract Res Clin Rheumatol       Date:  2017-11-06       Impact factor: 4.098

Review 2.  Systemic lupus erythematosus biomarkers: the challenging quest.

Authors:  Cristina Arriens; Jonathan D Wren; Melissa E Munroe; Chandra Mohan
Journal:  Rheumatology (Oxford)       Date:  2017-04-01       Impact factor: 7.580

3.  Proteomic Analyses Reveal Higher Levels of Neutrophil Activation in Men Than in Women With Systemic Lupus Erythematosus.

Authors:  Ming-Long Cai; Lan Gui; He Huang; Yu-Kun Zhang; Li Zhang; Zhu Chen; Yu-Jun Sheng
Journal:  Front Immunol       Date:  2022-06-21       Impact factor: 8.786

Review 4.  Biomarkers in rheumatic diseases: how can they facilitate diagnosis and assessment of disease activity?

Authors:  Chandra Mohan; Shervin Assassi
Journal:  BMJ       Date:  2015-11-26

5.  Axl, Ferritin, Insulin-Like Growth Factor Binding Protein 2, and Tumor Necrosis Factor Receptor Type II as Biomarkers in Systemic Lupus Erythematosus.

Authors:  Chi Chiu Mok; Hui Hua Ding; Marwa Kharboutli; Chandra Mohan
Journal:  Arthritis Care Res (Hoboken)       Date:  2016-07-28       Impact factor: 4.794

6.  Antibody-Array-Based Proteomic Screening of Serum Markers in Systemic Lupus Erythematosus: A Discovery Study.

Authors:  Tianfu Wu; Huihua Ding; Jie Han; Cristina Arriens; Chungwen Wei; Weilu Han; Claudia Pedroza; Shan Jiang; Jennifer Anolik; Michelle Petri; Ignacio Sanz; Ramesh Saxena; Chandra Mohan
Journal:  J Proteome Res       Date:  2016-06-07       Impact factor: 4.466

7.  Cross-sectional study of plasma Axl, ferritin, IGFBP4 and sTNFR2 as biomarkers of disease activity in childhood-onset SLE: A study of the Pediatric Nephrology Research Consortium.

Authors:  Samar A Soliman; Anam Haque; Sherene Mason; Larry A Greenbaum; M John Hicks; Chandra Mohan; Scott E Wenderfer
Journal:  Lupus       Date:  2021-05-14       Impact factor: 2.911

8.  Placebo-controlled randomized clinical trial of fish oil's impact on fatigue, quality of life, and disease activity in Systemic Lupus Erythematosus.

Authors:  Cristina Arriens; Linda S Hynan; Robert H Lerman; David R Karp; Chandra Mohan
Journal:  Nutr J       Date:  2015-08-18       Impact factor: 3.271

9.  Metabolic Profiling of Systemic Lupus Erythematosus and Comparison with Primary Sjögren's Syndrome and Systemic Sclerosis.

Authors:  Anders A Bengtsson; Johan Trygg; Dirk M Wuttge; Gunnar Sturfelt; Elke Theander; Magdalena Donten; Thomas Moritz; Carl-Johan Sennbro; Frida Torell; Christian Lood; Izabella Surowiec; Stefan Rännar; Torbjörn Lundstedt
Journal:  PLoS One       Date:  2016-07-21       Impact factor: 3.240

10.  A comprehensive database for integrated analysis of omics data in autoimmune diseases.

Authors:  Marta E Alarcón-Riquelme; Pedro Carmona-Sáez; Jordi Martorell-Marugán; Raúl López-Domínguez; Adrián García-Moreno; Daniel Toro-Domínguez; Juan Antonio Villatoro-García; Guillermo Barturen; Adoración Martín-Gómez; Kevin Troule; Gonzalo Gómez-López; Fátima Al-Shahrour; Víctor González-Rumayor; María Peña-Chilet; Joaquín Dopazo; Julio Sáez-Rodríguez
Journal:  BMC Bioinformatics       Date:  2021-06-24       Impact factor: 3.169

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