| Literature DB >> 24860384 |
J Pablo García-Merinos1, Heraclio López-Ruiz2, Yliana López3, Susana Rojas-Lima2.
Abstract
In the title compound, C15H17NO4S2, synthesized by addition of O-ethylxanthic acid potassium salt to a diastereomeric mixture of (4R)-3-(2-chloro-propano-yl)-4-phenyl-oxazolidin-2-one, the oxazolidinone ring has a twist conformation on the C-C bond. The phenyl ring is inclined to the mean plane of the oxazolidinone ring by 76.4 (3)°. In the chain the methine H atom is involved in a C-H⋯S and a C-H⋯O intra-molecular inter-action. In the crystal, mol-ecules are linked by C-H⋯π inter-actions, forming chains along [001]. The S configuration at the C atom to which the xanthate group is attached was determined by comparison to the known R configuration of the C atom to which the phenyl group is attached.Entities:
Year: 2014 PMID: 24860384 PMCID: PMC4011202 DOI: 10.1107/S1600536814007636
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H17NO4S2 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1321 reflections |
| θ = 1.7–26.0° | |
| µ = 0.34 mm−1 | |
| β = 94.911 (4)° | Block, colourless |
| 0.2 × 0.17 × 0.16 mm | |
| Bruker SMART CCD diffractometer | 1681 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 26.0°, θmin = 1.7° |
| φ and ω scans | |
| 10191 measured reflections | |
| 3223 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3223 reflections | Δρmax = 0.38 e Å−3 |
| 201 parameters | Δρmin = −0.35 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 6968 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.08 (18) |
| Experimental. Spectroscopic data for the title compound:
1H NMR (400 MHz, CDCl3)δ: 7.2
(m, 5H, CH, arom), 5.6 (q, 1H, CH (H-4), |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.8431 (7) | 0.9153 (19) | 1.0271 (7) | 0.101 (3) | |
| H1A | 0.8415 | 0.9226 | 0.9491 | 0.151* | |
| H1B | 0.9209 | 0.9693 | 1.0591 | 0.151* | |
| H1C | 0.7772 | 1.0015 | 1.0513 | 0.151* | |
| C2 | 0.8275 (6) | 0.6889 (16) | 1.0609 (6) | 0.082 (2) | |
| H2A | 0.8932 | 0.6011 | 1.0354 | 0.098* | |
| H2B | 0.8328 | 0.6804 | 1.1399 | 0.098* | |
| C3 | 0.6967 (6) | 0.5034 (10) | 0.9216 (5) | 0.0560 (17) | |
| C4 | 0.5331 (5) | 0.2814 (10) | 0.7734 (5) | 0.0479 (15) | |
| H4 | 0.6011 | 0.3210 | 0.7298 | 0.057* | |
| C5 | 0.5440 (7) | 0.0432 (10) | 0.8030 (6) | 0.069 (2) | |
| H5A | 0.4763 | 0.0023 | 0.8439 | 0.103* | |
| H5B | 0.6206 | 0.0185 | 0.8462 | 0.103* | |
| H5C | 0.5421 | −0.0415 | 0.7375 | 0.103* | |
| C6 | 0.4117 (6) | 0.3295 (9) | 0.7086 (5) | 0.0459 (14) | |
| C7 | 0.4827 (6) | 0.1846 (9) | 0.5343 (5) | 0.0481 (15) | |
| C8 | 0.2958 (6) | 0.1740 (13) | 0.4298 (5) | 0.0613 (17) | |
| H8A | 0.2566 | 0.0348 | 0.4153 | 0.074* | |
| H8B | 0.2653 | 0.2748 | 0.3734 | 0.074* | |
| C9 | 0.2687 (5) | 0.2584 (10) | 0.5439 (4) | 0.0458 (14) | |
| H9 | 0.2434 | 0.4104 | 0.5388 | 0.055* | |
| C10 | 0.1727 (5) | 0.1287 (9) | 0.5970 (4) | 0.0420 (14) | |
| C11 | 0.0555 (5) | 0.2134 (10) | 0.6019 (5) | 0.0516 (16) | |
| H11 | 0.0357 | 0.3479 | 0.5715 | 0.062* | |
| C12 | −0.0328 (6) | 0.0959 (11) | 0.6529 (6) | 0.0632 (19) | |
| H12 | −0.1116 | 0.1528 | 0.6567 | 0.076* | |
| C13 | −0.0047 (6) | −0.1024 (13) | 0.6975 (5) | 0.066 (2) | |
| H13 | −0.0641 | −0.1776 | 0.7324 | 0.080* | |
| C14 | 0.1105 (7) | −0.1919 (11) | 0.6912 (6) | 0.0673 (19) | |
| H14 | 0.1292 | −0.3279 | 0.7204 | 0.081* | |
| C15 | 0.1990 (5) | −0.0740 (13) | 0.6399 (5) | 0.0583 (15) | |
| H15 | 0.2770 | −0.1332 | 0.6346 | 0.070* | |
| N1 | 0.3934 (4) | 0.2412 (7) | 0.6027 (4) | 0.0423 (11) | |
| O1 | 0.7069 (4) | 0.6056 (9) | 1.0155 (4) | 0.0770 (15) | |
| O2 | 0.3286 (4) | 0.4268 (9) | 0.7448 (3) | 0.0631 (11) | |
| O3 | 0.5918 (4) | 0.1651 (7) | 0.5559 (4) | 0.0566 (12) | |
| O4 | 0.4291 (4) | 0.1544 (7) | 0.4330 (3) | 0.0551 (11) | |
| S1 | 0.80766 (14) | 0.4339 (4) | 0.84599 (14) | 0.0760 (6) | |
| S2 | 0.53803 (14) | 0.4534 (3) | 0.89279 (13) | 0.0631 (5) |
| C1 | 0.068 (5) | 0.143 (8) | 0.091 (6) | −0.024 (6) | −0.002 (4) | 0.019 (7) |
| C2 | 0.054 (4) | 0.126 (8) | 0.063 (4) | 0.001 (4) | −0.010 (4) | −0.019 (5) |
| C3 | 0.049 (3) | 0.072 (5) | 0.046 (4) | 0.001 (3) | 0.002 (3) | 0.003 (3) |
| C4 | 0.040 (3) | 0.054 (4) | 0.051 (3) | 0.004 (3) | 0.011 (3) | −0.003 (3) |
| C5 | 0.081 (5) | 0.067 (5) | 0.057 (4) | 0.006 (4) | 0.000 (4) | 0.006 (3) |
| C6 | 0.048 (3) | 0.043 (3) | 0.048 (4) | −0.006 (3) | 0.011 (3) | −0.002 (3) |
| C7 | 0.057 (4) | 0.038 (3) | 0.051 (4) | −0.003 (3) | 0.016 (3) | 0.002 (3) |
| C8 | 0.053 (4) | 0.083 (5) | 0.048 (4) | −0.002 (3) | 0.005 (3) | −0.002 (4) |
| C9 | 0.041 (3) | 0.050 (3) | 0.046 (3) | −0.002 (3) | 0.005 (3) | 0.002 (3) |
| C10 | 0.045 (3) | 0.039 (3) | 0.042 (3) | −0.004 (3) | 0.003 (3) | −0.003 (3) |
| C11 | 0.049 (4) | 0.056 (4) | 0.049 (4) | 0.007 (3) | 0.003 (3) | −0.002 (3) |
| C12 | 0.040 (3) | 0.076 (5) | 0.075 (5) | −0.007 (4) | 0.010 (3) | −0.013 (4) |
| C13 | 0.056 (4) | 0.085 (6) | 0.060 (4) | −0.034 (4) | 0.016 (3) | −0.003 (4) |
| C14 | 0.060 (4) | 0.070 (5) | 0.071 (4) | −0.009 (4) | 0.000 (4) | 0.007 (4) |
| C15 | 0.042 (3) | 0.060 (4) | 0.073 (4) | −0.001 (4) | 0.010 (3) | −0.003 (4) |
| N1 | 0.034 (2) | 0.050 (3) | 0.044 (3) | 0.000 (2) | 0.009 (2) | 0.000 (2) |
| O1 | 0.049 (3) | 0.116 (4) | 0.065 (3) | −0.009 (3) | 0.003 (2) | −0.028 (3) |
| O2 | 0.047 (2) | 0.088 (3) | 0.055 (2) | 0.014 (3) | 0.0065 (19) | −0.019 (3) |
| O3 | 0.044 (3) | 0.065 (3) | 0.063 (3) | 0.006 (2) | 0.015 (2) | −0.006 (2) |
| O4 | 0.059 (3) | 0.061 (3) | 0.047 (3) | −0.001 (2) | 0.017 (2) | −0.004 (2) |
| S1 | 0.0462 (9) | 0.1207 (15) | 0.0621 (10) | −0.0011 (13) | 0.0095 (7) | −0.0115 (13) |
| S2 | 0.0438 (8) | 0.0872 (12) | 0.0585 (9) | −0.0036 (10) | 0.0067 (7) | −0.0216 (10) |
| C1—C2 | 1.475 (13) | C7—O4 | 1.344 (7) |
| C1—H1A | 0.9600 | C7—N1 | 1.382 (7) |
| C1—H1B | 0.9600 | C8—O4 | 1.449 (8) |
| C1—H1C | 0.9600 | C8—C9 | 1.550 (8) |
| C2—O1 | 1.472 (8) | C8—H8A | 0.9700 |
| C2—H2A | 0.9700 | C8—H8B | 0.9700 |
| C2—H2B | 0.9700 | C9—N1 | 1.483 (7) |
| C3—O1 | 1.313 (7) | C9—C10 | 1.507 (8) |
| C3—S1 | 1.642 (6) | C9—H9 | 0.9800 |
| C3—S2 | 1.756 (6) | C10—C15 | 1.381 (9) |
| C4—C6 | 1.511 (8) | C10—C11 | 1.383 (8) |
| C4—C5 | 1.520 (8) | C11—C12 | 1.395 (9) |
| C4—S2 | 1.811 (6) | C11—H11 | 0.9300 |
| C4—H4 | 0.9800 | C12—C13 | 1.367 (10) |
| C5—H5A | 0.9600 | C12—H12 | 0.9300 |
| C5—H5B | 0.9600 | C13—C14 | 1.376 (10) |
| C5—H5C | 0.9600 | C13—H13 | 0.9300 |
| C6—O2 | 1.201 (7) | C14—C15 | 1.399 (9) |
| C6—N1 | 1.411 (7) | C14—H14 | 0.9300 |
| C7—O3 | 1.198 (8) | C15—H15 | 0.9300 |
| C2—C1—H1A | 109.5 | C9—C8—H8A | 110.6 |
| C2—C1—H1B | 109.5 | O4—C8—H8B | 110.6 |
| H1A—C1—H1B | 109.5 | C9—C8—H8B | 110.6 |
| C2—C1—H1C | 109.5 | H8A—C8—H8B | 108.7 |
| H1A—C1—H1C | 109.5 | N1—C9—C10 | 112.7 (5) |
| H1B—C1—H1C | 109.5 | N1—C9—C8 | 100.5 (4) |
| O1—C2—C1 | 110.2 (6) | C10—C9—C8 | 113.9 (5) |
| O1—C2—H2A | 109.6 | N1—C9—H9 | 109.8 |
| C1—C2—H2A | 109.6 | C10—C9—H9 | 109.8 |
| O1—C2—H2B | 109.6 | C8—C9—H9 | 109.8 |
| C1—C2—H2B | 109.6 | C15—C10—C11 | 119.2 (5) |
| H2A—C2—H2B | 108.1 | C15—C10—C9 | 121.4 (5) |
| O1—C3—S1 | 127.9 (5) | C11—C10—C9 | 119.3 (5) |
| O1—C3—S2 | 105.7 (4) | C10—C11—C12 | 119.5 (6) |
| S1—C3—S2 | 126.4 (4) | C10—C11—H11 | 120.2 |
| C6—C4—C5 | 111.4 (5) | C12—C11—H11 | 120.2 |
| C6—C4—S2 | 106.1 (4) | C13—C12—C11 | 120.6 (6) |
| C5—C4—S2 | 112.3 (5) | C13—C12—H12 | 119.7 |
| C6—C4—H4 | 109.0 | C11—C12—H12 | 119.7 |
| C5—C4—H4 | 109.0 | C12—C13—C14 | 120.8 (6) |
| S2—C4—H4 | 109.0 | C12—C13—H13 | 119.6 |
| C4—C5—H5A | 109.5 | C14—C13—H13 | 119.6 |
| C4—C5—H5B | 109.5 | C13—C14—C15 | 118.5 (7) |
| H5A—C5—H5B | 109.5 | C13—C14—H14 | 120.7 |
| C4—C5—H5C | 109.5 | C15—C14—H14 | 120.7 |
| H5A—C5—H5C | 109.5 | C10—C15—C14 | 121.3 (6) |
| H5B—C5—H5C | 109.5 | C10—C15—H15 | 119.4 |
| O2—C6—N1 | 119.1 (5) | C14—C15—H15 | 119.4 |
| O2—C6—C4 | 123.5 (5) | C7—N1—C6 | 127.6 (5) |
| N1—C6—C4 | 117.3 (5) | C7—N1—C9 | 112.3 (5) |
| O3—C7—O4 | 122.3 (5) | C6—N1—C9 | 118.2 (4) |
| O3—C7—N1 | 128.5 (6) | C3—O1—C2 | 120.5 (5) |
| O4—C7—N1 | 109.3 (5) | C7—O4—C8 | 111.5 (5) |
| O4—C8—C9 | 105.7 (5) | C3—S2—C4 | 103.2 (3) |
| O4—C8—H8A | 110.6 | ||
| C5—C4—C6—O2 | 108.2 (7) | O3—C7—N1—C9 | 177.2 (6) |
| S2—C4—C6—O2 | −14.3 (7) | O4—C7—N1—C9 | −1.9 (6) |
| C5—C4—C6—N1 | −67.3 (7) | O2—C6—N1—C7 | 158.5 (6) |
| S2—C4—C6—N1 | 170.3 (4) | C4—C6—N1—C7 | −25.8 (8) |
| O4—C8—C9—N1 | −8.7 (6) | O2—C6—N1—C9 | −4.6 (8) |
| O4—C8—C9—C10 | −129.5 (5) | C4—C6—N1—C9 | 171.1 (5) |
| N1—C9—C10—C15 | −40.0 (8) | C10—C9—N1—C7 | 128.3 (5) |
| C8—C9—C10—C15 | 73.6 (7) | C8—C9—N1—C7 | 6.7 (6) |
| N1—C9—C10—C11 | 140.7 (5) | C10—C9—N1—C6 | −66.1 (6) |
| C8—C9—C10—C11 | −105.7 (6) | C8—C9—N1—C6 | 172.3 (5) |
| C15—C10—C11—C12 | 1.9 (9) | S1—C3—O1—C2 | 5.3 (10) |
| C9—C10—C11—C12 | −178.7 (5) | S2—C3—O1—C2 | −175.1 (6) |
| C10—C11—C12—C13 | −0.3 (10) | C1—C2—O1—C3 | 92.6 (8) |
| C11—C12—C13—C14 | −1.2 (10) | O3—C7—O4—C8 | 176.3 (6) |
| C12—C13—C14—C15 | 1.1 (10) | N1—C7—O4—C8 | −4.5 (6) |
| C11—C10—C15—C14 | −2.0 (9) | C9—C8—O4—C7 | 8.6 (7) |
| C9—C10—C15—C14 | 178.6 (6) | O1—C3—S2—C4 | −172.4 (5) |
| C13—C14—C15—C10 | 0.5 (10) | S1—C3—S2—C4 | 7.2 (5) |
| O3—C7—N1—C6 | 13.3 (10) | C6—C4—S2—C3 | −149.4 (4) |
| O4—C7—N1—C6 | −165.8 (5) | C5—C4—S2—C3 | 88.8 (5) |
| H··· | ||||
| C4—H4···S1 | 0.98 | 2.65 | 3.180 (9) | 114 |
| C4—H4···O3 | 0.98 | 2.34 | 2.895 (10) | 115 |
| C2—H2 | 0.97 | 2.90 | 3.807 (8) | 156 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C10–C15 phenyl ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C4—H4⋯S1 | 0.98 | 2.65 | 3.180 (9) | 114 |
| C4—H4⋯O3 | 0.98 | 2.34 | 2.895 (10) | 115 |
| C2—H2 | 0.97 | 2.90 | 3.807 (8) | 156 |
Symmetry code: (i) .