| Literature DB >> 24860317 |
Monica Fuchs1, Thomas Zevaco1, Eckhard Dinjus1, Olaf Walter1.
Abstract
The slightly yellow-coloured title complex, [Zn(C18H16N4O4)(H2O)] n , crystallizes with one mol-ecule in the asymmetric unit. The structure clearly shows the mer-η(4) O,O,N,N-binding mode of the N,N'-bis-(2-cyano-ethyl-propeno-yl)-1,2-di-amido-benzene ligand stabilizing the Zn centre of a distorted octa-hedral environment. The fifth coordination site in one apical position is held by a coordinating solvent water mol-ecule whereas the complete octa-hedral coordination sphere is completed by coordination of one N atom from a CN group of a neighbouring mol-ecule, leading to the final polymeric structure consisting of zigzag staggered chains in parallel orientation along the c-axis direction. Between the coord-in-ated water solvent molecule and the N atoms of uncoord-in-ated cyano-groups of neighboured units, two H-bridge bonds are formed. One of these H-bridge bonds is of inter- whereas the other of intra-strand nature, leading to a two-dimensional network parallel to (110) stabilizing the supramolecular structure. Six Zn-O or Zn-N bonds are found with lengths ranging from 2.061 (1) to 2.185 (1) Å and bond angles about the Zn atom are clustered in the ranges 79.83 (4)-104.21 (4) and 167.05 (4)-170.28 (4)°.Entities:
Year: 2014 PMID: 24860317 PMCID: PMC4011238 DOI: 10.1107/S1600536814008381
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C18H16N4O4)(H2O)] | |
| Mo | |
| Orthorhombic, | Cell parameters from 9786 reflections |
| θ = 5.5–56.7° | |
| µ = 1.43 mm−1 | |
| Quader, light yellow | |
| 0.10 × 0.09 × 0.07 mm | |
| Bruker APEXII Quazar diffractometer | 4294 independent reflections |
| Radiation source: microfocus sealed Iµs tube | 3812 reflections with |
| Detector resolution: 66 pixels mm-1 | |
| combined φ– and ω–scans | θmax = 28.6°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 60234 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4294 reflections | (Δ/σ)max = 0.001 |
| 268 parameters | Δρmax = 0.42 e Å−3 |
| 0 restraints | Δρmin = −0.43 e Å−3 |
| Experimental. Spectroscopic data: 1H NMR (400 MHz, dmso-d6): δ = 7.56, dd, 3JHH= 6.1 Hz, 4JHH= 3.1 Hz, 2H, H(arom); 7.05, dd, 3JHH= 6.1 Hz, 4JHH= 3.1 Hz, 2H, H(arom); 4.25, q, 3JHH= 7.1 Hz, 4H, OCH2; 1.29, t, 3JHH= 7.1 Hz, 3H, CH3. 13C NMR (100 MHz, dmso-d6): δ = 177.77; 156.27; 138.01;
124.39; 121.19; 114.89; 68.05; 60.24; 14.13. ESI-MS (m/ |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Zn1 | 0.50231 (2) | 0.19828 (2) | 0.37062 (2) | 0.00984 (6) | |
| O1 | 0.36966 (7) | −0.12202 (11) | 0.28089 (3) | 0.0161 (2) | |
| O2 | 0.41756 (7) | 0.03163 (10) | 0.34019 (3) | 0.01339 (19) | |
| O3 | 0.34564 (7) | 0.50414 (11) | 0.45261 (4) | 0.0178 (2) | |
| O4 | 0.40466 (7) | 0.31264 (10) | 0.41189 (3) | 0.01378 (19) | |
| O5 | 0.51731 (9) | 0.06806 (12) | 0.43673 (4) | 0.0195 (2) | |
| H51 | 0.5088 (13) | −0.014 (3) | 0.4428 (7) | 0.026 (5)* | |
| H52 | 0.5083 (14) | 0.119 (3) | 0.4611 (9) | 0.035 (6)* | |
| N1 | 0.61097 (8) | 0.33622 (12) | 0.39350 (4) | 0.0107 (2) | |
| N2 | 0.61290 (8) | 0.12889 (12) | 0.32640 (4) | 0.0105 (2) | |
| N3 | 0.53603 (9) | −0.15532 (13) | 0.19114 (4) | 0.0150 (2) | |
| N4 | 0.50550 (9) | 0.76393 (14) | 0.47291 (4) | 0.0168 (2) | |
| C1 | 0.70235 (10) | 0.29789 (13) | 0.37492 (4) | 0.0104 (2) | |
| C2 | 0.79016 (10) | 0.35644 (14) | 0.38978 (5) | 0.0127 (2) | |
| H2 | 0.7915 | 0.4271 | 0.4150 | 0.017 (2)* | |
| C3 | 0.87537 (10) | 0.31270 (14) | 0.36822 (5) | 0.0131 (3) | |
| H3 | 0.9342 | 0.3561 | 0.3779 | 0.017 (2)* | |
| C4 | 0.87557 (10) | 0.20536 (14) | 0.33235 (5) | 0.0133 (3) | |
| H4 | 0.9342 | 0.1760 | 0.3177 | 0.017 (2)* | |
| C5 | 0.78987 (10) | 0.14213 (14) | 0.31837 (5) | 0.0129 (3) | |
| H5 | 0.7900 | 0.0664 | 0.2949 | 0.017 (2)* | |
| C6 | 0.70280 (10) | 0.18889 (14) | 0.33858 (4) | 0.0106 (2) | |
| C7 | 0.60147 (10) | 0.06126 (13) | 0.28535 (4) | 0.0109 (2) | |
| H7 | 0.6540 | 0.0611 | 0.2633 | 0.011 (3)* | |
| C8 | 0.51716 (10) | −0.01222 (15) | 0.27076 (5) | 0.0117 (2) | |
| C9 | 0.43345 (10) | −0.02889 (14) | 0.30044 (4) | 0.0116 (2) | |
| C10 | 0.52453 (9) | −0.09216 (15) | 0.22679 (5) | 0.0117 (2) | |
| C11 | 0.29041 (10) | −0.17030 (16) | 0.31142 (5) | 0.0173 (3) | |
| H11A | 0.2381 | −0.2080 | 0.2906 | 0.027 (2)* | |
| H11B | 0.2650 | −0.0872 | 0.3303 | 0.027 (2)* | |
| C12 | 0.32314 (12) | −0.28751 (16) | 0.34613 (6) | 0.0219 (3) | |
| H12A | 0.3535 | −0.3660 | 0.3276 | 0.027 (2)* | |
| H12B | 0.2677 | −0.3256 | 0.3640 | 0.027 (2)* | |
| H12C | 0.3695 | −0.2470 | 0.3693 | 0.027 (2)* | |
| C13 | 0.59711 (10) | 0.46053 (14) | 0.41516 (4) | 0.0111 (2) | |
| H13 | 0.6510 | 0.5226 | 0.4188 | 0.011 (3)* | |
| C14 | 0.50756 (10) | 0.51032 (15) | 0.43377 (5) | 0.0121 (3) | |
| C16 | 0.50610 (9) | 0.64963 (16) | 0.45565 (5) | 0.0132 (3) | |
| C15 | 0.41851 (10) | 0.43285 (14) | 0.43127 (4) | 0.0126 (3) | |
| C17 | 0.25169 (11) | 0.43452 (17) | 0.45179 (5) | 0.0218 (3) | |
| H17A | 0.2435 | 0.3821 | 0.4206 | 0.037 (2)* | |
| H17B | 0.2010 | 0.5093 | 0.4539 | 0.037 (2)* | |
| C18 | 0.24101 (12) | 0.32972 (19) | 0.49360 (5) | 0.0272 (4) | |
| H18A | 0.2945 | 0.2609 | 0.4932 | 0.037 (2)* | |
| H18B | 0.1803 | 0.2770 | 0.4903 | 0.037 (2)* | |
| H18C | 0.2412 | 0.3832 | 0.5245 | 0.037 (2)* |
| Zn1 | 0.01164 (9) | 0.00914 (9) | 0.00874 (8) | −0.00053 (5) | 0.00045 (5) | −0.00140 (5) |
| O1 | 0.0152 (5) | 0.0196 (5) | 0.0134 (4) | −0.0059 (4) | 0.0007 (3) | −0.0042 (4) |
| O2 | 0.0143 (5) | 0.0136 (5) | 0.0122 (4) | −0.0016 (4) | 0.0011 (3) | −0.0024 (3) |
| O3 | 0.0141 (5) | 0.0166 (5) | 0.0226 (5) | 0.0008 (4) | 0.0038 (4) | −0.0058 (4) |
| O4 | 0.0156 (5) | 0.0132 (5) | 0.0126 (4) | −0.0006 (4) | 0.0013 (4) | −0.0028 (3) |
| O5 | 0.0387 (7) | 0.0089 (5) | 0.0110 (5) | 0.0003 (4) | 0.0024 (4) | −0.0005 (4) |
| N1 | 0.0131 (5) | 0.0096 (5) | 0.0095 (5) | 0.0002 (4) | 0.0000 (4) | −0.0002 (4) |
| N2 | 0.0121 (5) | 0.0092 (5) | 0.0102 (5) | −0.0003 (4) | −0.0010 (4) | −0.0007 (4) |
| N3 | 0.0143 (6) | 0.0172 (6) | 0.0136 (5) | −0.0040 (5) | −0.0001 (4) | −0.0026 (4) |
| N4 | 0.0218 (7) | 0.0124 (6) | 0.0161 (6) | 0.0003 (5) | 0.0043 (4) | −0.0015 (5) |
| C1 | 0.0134 (6) | 0.0088 (6) | 0.0092 (5) | 0.0013 (5) | −0.0007 (4) | 0.0015 (4) |
| C2 | 0.0163 (7) | 0.0097 (6) | 0.0120 (6) | −0.0008 (5) | −0.0023 (5) | −0.0005 (4) |
| C3 | 0.0138 (6) | 0.0111 (6) | 0.0142 (6) | −0.0024 (5) | −0.0030 (5) | 0.0020 (5) |
| C4 | 0.0122 (6) | 0.0136 (6) | 0.0140 (6) | 0.0007 (5) | 0.0015 (5) | 0.0016 (5) |
| C5 | 0.0153 (6) | 0.0116 (6) | 0.0120 (6) | 0.0004 (5) | −0.0004 (5) | −0.0018 (5) |
| C6 | 0.0137 (6) | 0.0086 (6) | 0.0097 (5) | −0.0005 (5) | −0.0010 (4) | 0.0013 (4) |
| C7 | 0.0130 (6) | 0.0095 (6) | 0.0101 (5) | 0.0006 (5) | 0.0006 (4) | 0.0004 (4) |
| C8 | 0.0140 (6) | 0.0113 (6) | 0.0098 (6) | −0.0011 (5) | −0.0008 (5) | −0.0012 (5) |
| C9 | 0.0137 (6) | 0.0095 (6) | 0.0116 (5) | −0.0001 (5) | −0.0022 (5) | 0.0006 (4) |
| C10 | 0.0106 (6) | 0.0118 (6) | 0.0126 (6) | −0.0026 (5) | −0.0014 (5) | 0.0021 (5) |
| C11 | 0.0121 (6) | 0.0193 (7) | 0.0205 (6) | −0.0047 (5) | 0.0026 (5) | −0.0045 (5) |
| C12 | 0.0253 (8) | 0.0162 (7) | 0.0243 (7) | −0.0028 (6) | 0.0065 (6) | −0.0015 (5) |
| C13 | 0.0147 (6) | 0.0103 (6) | 0.0085 (5) | −0.0008 (5) | −0.0014 (5) | 0.0003 (4) |
| C14 | 0.0165 (7) | 0.0095 (6) | 0.0105 (6) | 0.0014 (5) | 0.0005 (4) | −0.0012 (5) |
| C16 | 0.0156 (7) | 0.0137 (7) | 0.0103 (6) | 0.0005 (5) | 0.0021 (4) | 0.0016 (5) |
| C15 | 0.0151 (7) | 0.0131 (6) | 0.0096 (5) | 0.0024 (5) | 0.0008 (5) | 0.0009 (5) |
| C17 | 0.0116 (7) | 0.0269 (8) | 0.0268 (7) | 0.0002 (6) | 0.0006 (5) | −0.0103 (6) |
| C18 | 0.0210 (8) | 0.0365 (9) | 0.0242 (7) | −0.0136 (7) | 0.0030 (6) | −0.0085 (7) |
| Zn1—O4 | 2.0606 (9) | C3—H3 | 0.9500 |
| Zn1—N2 | 2.0626 (11) | C4—C5 | 1.3831 (19) |
| Zn1—N1 | 2.0754 (11) | C4—H4 | 0.9500 |
| Zn1—O2 | 2.1112 (9) | C5—C6 | 1.4016 (18) |
| Zn1—O5 | 2.1852 (11) | C5—H5 | 0.9500 |
| Zn1—N3i | 2.2317 (11) | C7—C8 | 1.4141 (18) |
| O1—C9 | 1.3476 (16) | C7—H7 | 0.9500 |
| O1—C11 | 1.4555 (16) | C8—C10 | 1.4175 (18) |
| O2—C9 | 1.2447 (15) | C8—C9 | 1.4304 (18) |
| O3—C15 | 1.3440 (16) | C11—C12 | 1.511 (2) |
| O3—C17 | 1.4582 (18) | C11—H11A | 0.9900 |
| O4—C15 | 1.2455 (16) | C11—H11B | 0.9900 |
| O5—H51 | 0.79 (2) | C12—H12A | 0.9800 |
| O5—H52 | 0.83 (2) | C12—H12B | 0.9800 |
| N1—C13 | 1.3064 (16) | C12—H12C | 0.9800 |
| N1—C1 | 1.4161 (17) | C13—C14 | 1.4242 (18) |
| N2—C7 | 1.2970 (16) | C13—H13 | 0.9500 |
| N2—C6 | 1.4097 (17) | C14—C16 | 1.4192 (19) |
| N3—C10 | 1.1493 (17) | C14—C15 | 1.4336 (19) |
| N3—Zn1ii | 2.2317 (11) | C17—C18 | 1.508 (2) |
| N4—C16 | 1.157 (2) | C17—H17A | 0.9900 |
| C1—C2 | 1.3982 (18) | C17—H17B | 0.9900 |
| C1—C6 | 1.4163 (17) | C18—H18A | 0.9800 |
| C2—C3 | 1.3862 (19) | C18—H18B | 0.9800 |
| C2—H2 | 0.9500 | C18—H18C | 0.9800 |
| C3—C4 | 1.3962 (18) | ||
| O4—Zn1—N2 | 167.20 (4) | N2—C6—C1 | 116.22 (12) |
| O4—Zn1—N1 | 90.06 (4) | N2—C7—C8 | 125.34 (12) |
| N2—Zn1—N1 | 79.83 (4) | N2—C7—H7 | 117.3 |
| O4—Zn1—O2 | 102.78 (4) | C8—C7—H7 | 117.3 |
| N2—Zn1—O2 | 87.65 (4) | C7—C8—C10 | 115.48 (12) |
| N1—Zn1—O2 | 167.05 (4) | C7—C8—C9 | 124.60 (12) |
| O4—Zn1—O5 | 83.64 (4) | C10—C8—C9 | 119.15 (12) |
| N2—Zn1—O5 | 104.21 (4) | O2—C9—O1 | 121.16 (12) |
| N1—Zn1—O5 | 90.97 (4) | O2—C9—C8 | 126.50 (12) |
| O2—Zn1—O5 | 88.89 (4) | O1—C9—C8 | 112.33 (11) |
| O4—Zn1—N3i | 87.06 (4) | N3—C10—C8 | 176.10 (14) |
| N2—Zn1—N3i | 85.45 (4) | O1—C11—C12 | 110.65 (12) |
| N1—Zn1—N3i | 91.86 (4) | O1—C11—H11A | 109.5 |
| O2—Zn1—N3i | 90.43 (4) | C12—C11—H11A | 109.5 |
| O5—Zn1—N3i | 170.28 (4) | O1—C11—H11B | 109.5 |
| C9—O1—C11 | 117.81 (10) | C12—C11—H11B | 109.5 |
| C9—O2—Zn1 | 125.02 (9) | H11A—C11—H11B | 108.1 |
| C15—O3—C17 | 117.09 (11) | C11—C12—H12A | 109.5 |
| C15—O4—Zn1 | 126.05 (9) | C11—C12—H12B | 109.5 |
| Zn1—O5—H51 | 133.8 (15) | H12A—C12—H12B | 109.5 |
| Zn1—O5—H52 | 110.0 (16) | C11—C12—H12C | 109.5 |
| H51—O5—H52 | 111 (2) | H12A—C12—H12C | 109.5 |
| C13—N1—C1 | 121.06 (11) | H12B—C12—H12C | 109.5 |
| C13—N1—Zn1 | 124.65 (9) | N1—C13—C14 | 125.16 (12) |
| C1—N1—Zn1 | 113.18 (8) | N1—C13—H13 | 117.4 |
| C7—N2—C6 | 120.25 (11) | C14—C13—H13 | 117.4 |
| C7—N2—Zn1 | 124.61 (9) | C16—C14—C13 | 117.16 (12) |
| C6—N2—Zn1 | 113.73 (8) | C16—C14—C15 | 117.38 (12) |
| C10—N3—Zn1ii | 156.83 (11) | C13—C14—C15 | 125.44 (12) |
| C2—C1—N1 | 125.81 (11) | N4—C16—C14 | 179.05 (15) |
| C2—C1—C6 | 118.41 (12) | O4—C15—O3 | 120.33 (12) |
| N1—C1—C6 | 115.77 (12) | O4—C15—C14 | 126.80 (12) |
| C3—C2—C1 | 120.83 (12) | O3—C15—C14 | 112.87 (11) |
| C3—C2—H2 | 119.6 | O3—C17—C18 | 111.08 (12) |
| C1—C2—H2 | 119.6 | O3—C17—H17A | 109.4 |
| C2—C3—C4 | 120.58 (13) | C18—C17—H17A | 109.4 |
| C2—C3—H3 | 119.7 | O3—C17—H17B | 109.4 |
| C4—C3—H3 | 119.7 | C18—C17—H17B | 109.4 |
| C5—C4—C3 | 119.55 (13) | H17A—C17—H17B | 108.0 |
| C5—C4—H4 | 120.2 | C17—C18—H18A | 109.5 |
| C3—C4—H4 | 120.2 | C17—C18—H18B | 109.5 |
| C4—C5—C6 | 120.49 (12) | H18A—C18—H18B | 109.5 |
| C4—C5—H5 | 119.8 | C17—C18—H18C | 109.5 |
| C6—C5—H5 | 119.8 | H18A—C18—H18C | 109.5 |
| C5—C6—N2 | 123.66 (11) | H18B—C18—H18C | 109.5 |
| C5—C6—C1 | 120.06 (12) |
| H··· | ||||
| O5—H51···N4iii | 0.79 (2) | 2.21 (2) | 2.9823 (17) | 168 (2) |
| O5—H52···N4iv | 0.83 (2) | 2.12 (2) | 2.9405 (16) | 174 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O5—H51⋯N4i | 0.79 (2) | 2.21 (2) | 2.9823 (17) | 168 (2) |
| O5—H52⋯N4ii | 0.83 (2) | 2.12 (2) | 2.9405 (16) | 174 (2) |
Symmetry codes: (i) ; (ii) .