Literature DB >> 24860302

Tri-chlorido-(1-ethyl-piperazin-1-ium)cobalt(II).

Abdelhamid Chiheb Dhieb1, Daron E Janzen2, Mohamed Rzaigui1, Wajda Smirani Sta1.   

Abstract

In the title complex, [Co(C6H15N2)Cl3], the Co(2+) ion is coordinated in a distorted tetra-hedral fashion by three chloride ions and one N atom of the piperazine ring; the ring adopts a chair conformation with the N-Co and N-CEt bonds in equatorial orientations. In the crystal, mol-ecules are connected by N-H⋯Cl hydrogen bonds, generating (10-1) sheets.

Entities:  

Year:  2014        PMID: 24860302      PMCID: PMC4011199          DOI: 10.1107/S1600536814006989

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Ciccarese et al. (1998 ▶); Clemente et al. (1999 ▶); Marzotto et al. (2000 ▶).

Experimental

Crystal data

[Co(C6H15N2)Cl3] M = 280.49 Monoclinic, a = 7.421 (3) Å b = 18.160 (7) Å c = 8.691 (4) Å β = 90.524 (7)° V = 1171.1 (8) Å3 Z = 4 Mo Kα radiation μ = 2.10 mm−1 T = 173 K 0.32 × 0.13 × 0.13 mm

Data collection

Rigaku XtaLAB mini diffractometer Absorption correction: multi-scan (REQAB; Rigaku, 1998 ▶) T min = 0.529, T max = 0.761 11015 measured reflections 2399 independent reflections 2099 reflections with F 2 > 2σ(F 2) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.050 S = 1.08 2399 reflections 118 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.27 e Å−3 Data collection: CrystalClear-SM Expert (Rigaku, 2011 ▶); cell refinement: CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SIR2004 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: CrystalStructure (Rigaku, 2010 ▶). Crystal structure: contains datablock(s) General, I. DOI: 10.1107/S1600536814006989/hb7215sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814006989/hb7215Isup2.hkl CCDC reference: 994292 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Co(C6H15N2)Cl3]F(000) = 572.00
Mr = 280.49Dx = 1.591 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ynCell parameters from 7042 reflections
a = 7.421 (3) Åθ = 3.3–26.5°
b = 18.160 (7) ŵ = 2.10 mm1
c = 8.691 (4) ÅT = 173 K
β = 90.524 (7)°Prism, blue
V = 1171.1 (8) Å30.32 × 0.13 × 0.13 mm
Z = 4
Rigaku XtaLAB mini diffractometer2099 reflections with F2 > 2σ(F2)
Detector resolution: 6.849 pixels mm-1Rint = 0.025
ω scansθmax = 26.4°
Absorption correction: multi-scan (REQAB; Rigaku, 1998)h = −9→9
Tmin = 0.529, Tmax = 0.761k = −22→22
11015 measured reflectionsl = −10→10
2399 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.022Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.050H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0195P)2 + 0.4P] where P = (Fo2 + 2Fc2)/3
2399 reflections(Δ/σ)max = 0.001
118 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.27 e Å3
Primary atom site location: structure-invariant direct methods
Geometry. ENTER SPECIAL DETAILS OF THE MOLECULAR GEOMETRY
Refinement. Refinement was performed using all reflections. The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt).
xyzUiso*/Ueq
Co10.50887 (3)0.124866 (12)−0.13052 (2)0.02446 (7)
Cl10.62618 (6)0.22726 (2)−0.24155 (5)0.03456 (11)
Cl20.21414 (6)0.13426 (3)−0.07964 (6)0.04714 (13)
Cl30.58634 (6)0.02448 (2)−0.27061 (5)0.03491 (11)
N10.62169 (18)0.11055 (8)0.08596 (15)0.0237 (3)
N20.87397 (18)0.13728 (7)0.34217 (15)0.0235 (3)
C10.6034 (3)0.17490 (9)0.19013 (19)0.0301 (4)
C20.6795 (3)0.15991 (10)0.34991 (19)0.0306 (4)
C30.8943 (3)0.07188 (9)0.23786 (19)0.0306 (4)
C40.8130 (3)0.08778 (10)0.07959 (19)0.0318 (4)
C50.9516 (3)0.12430 (10)0.50161 (19)0.0324 (4)
C61.1522 (3)0.10910 (10)0.5011 (3)0.0393 (5)
H1A0.47430.18800.19850.0361*
H1B0.66700.21760.14500.0361*
H2A0.66880.20480.41370.0367*
H2B0.60890.12030.39930.0367*
H20.932 (3)0.1733 (10)0.3034 (19)0.022 (5)*
H3A0.83330.02880.28370.0367*
H3B1.02370.05980.22720.0367*
H4A0.88350.12730.02980.0381*
H4B0.82270.04300.01510.0381*
H5A0.92830.16820.56600.0389*
H5B0.88900.08200.54900.0389*
H6A1.21410.14870.44610.0472*
H6B1.17490.06200.44970.0472*
H6C1.19740.10680.60730.0472*
H10.566 (3)0.0763 (11)0.128 (3)0.032 (6)*
U11U22U33U12U13U23
Co10.02308 (12)0.02612 (12)0.02421 (12)−0.00175 (8)0.00169 (8)−0.00177 (9)
Cl10.0399 (3)0.0238 (2)0.0403 (3)0.00338 (17)0.01486 (18)0.00187 (17)
Cl20.0227 (3)0.0724 (4)0.0464 (3)−0.0018 (2)0.00471 (18)−0.0063 (3)
Cl30.0445 (3)0.0260 (3)0.0344 (3)−0.00757 (17)0.01151 (18)−0.00670 (17)
N10.0221 (7)0.0234 (8)0.0257 (7)−0.0032 (6)0.0028 (6)−0.0002 (6)
N20.0259 (7)0.0209 (7)0.0238 (7)−0.0035 (6)0.0013 (6)0.0001 (6)
C10.0299 (9)0.0289 (9)0.0314 (9)0.0056 (7)−0.0011 (7)−0.0051 (7)
C20.0278 (9)0.0347 (10)0.0294 (9)0.0044 (7)0.0039 (7)−0.0085 (8)
C30.0312 (9)0.0294 (9)0.0312 (9)0.0065 (7)−0.0023 (7)−0.0069 (7)
C40.0263 (9)0.0406 (11)0.0285 (9)0.0069 (8)0.0012 (7)−0.0075 (8)
C50.0405 (10)0.0347 (10)0.0220 (9)−0.0017 (8)−0.0027 (7)−0.0003 (7)
C60.0424 (11)0.0400 (11)0.0354 (10)0.0069 (8)−0.0107 (8)0.0022 (8)
Co1—Cl12.2720 (8)C1—H1A0.990
Co1—Cl22.2419 (10)C1—H1B0.990
Co1—Cl32.2691 (8)C2—H2A0.990
Co1—N12.0686 (15)C2—H2B0.990
N1—C11.485 (3)C3—H3A0.990
N1—C41.480 (3)C3—H3B0.990
N2—C21.502 (3)C4—H4A0.990
N2—C31.503 (3)C4—H4B0.990
N2—C51.514 (3)C5—H5A0.990
C1—C21.519 (3)C5—H5B0.990
C3—C41.525 (3)C6—H6A0.980
C5—C61.514 (3)C6—H6B0.980
N1—H10.83 (2)C6—H6C0.980
N2—H20.853 (18)
Cl1—Co1—Cl2113.57 (3)H1A—C1—H1B107.846
Cl1—Co1—Cl3109.25 (4)N2—C2—H2A109.442
Cl1—Co1—N1109.61 (5)N2—C2—H2B109.452
Cl2—Co1—Cl3114.80 (2)C1—C2—H2A109.445
Cl2—Co1—N1102.57 (5)C1—C2—H2B109.448
Cl3—Co1—N1106.53 (5)H2A—C2—H2B108.051
Co1—N1—C1114.64 (11)N2—C3—H3A109.507
Co1—N1—C4112.42 (10)N2—C3—H3B109.508
C1—N1—C4109.62 (13)C4—C3—H3A109.504
C2—N2—C3110.19 (13)C4—C3—H3B109.503
C2—N2—C5111.05 (13)H3A—C3—H3B108.076
C3—N2—C5112.93 (13)N1—C4—H4A108.972
N1—C1—C2112.39 (14)N1—C4—H4B108.974
N2—C2—C1110.95 (14)C3—C4—H4A108.977
N2—C3—C4110.70 (14)C3—C4—H4B108.982
N1—C4—C3113.02 (14)H4A—C4—H4B107.779
N2—C5—C6113.06 (14)N2—C5—H5A108.969
Co1—N1—H1107.3 (13)N2—C5—H5B108.974
C1—N1—H1105.7 (14)C6—C5—H5A108.963
C4—N1—H1106.6 (14)C6—C5—H5B108.971
C2—N2—H2107.2 (12)H5A—C5—H5B107.768
C3—N2—H2108.2 (12)C5—C6—H6A109.474
C5—N2—H2107.0 (11)C5—C6—H6B109.466
N1—C1—H1A109.127C5—C6—H6C109.477
N1—C1—H1B109.120H6A—C6—H6B109.472
C2—C1—H1A109.128H6A—C6—H6C109.470
C2—C1—H1B109.129H6B—C6—H6C109.468
Cl1—Co1—N1—C155.30 (9)C4—N1—C1—C2−55.55 (16)
Cl1—Co1—N1—C4−70.78 (9)C2—N2—C3—C454.82 (16)
Cl2—Co1—N1—C1−65.66 (8)C3—N2—C2—C1−55.64 (16)
Cl2—Co1—N1—C4168.27 (7)C2—N2—C5—C6−174.02 (12)
Cl3—Co1—N1—C1173.39 (7)C5—N2—C2—C1178.47 (12)
Cl3—Co1—N1—C447.31 (9)C3—N2—C5—C661.63 (17)
Co1—N1—C1—C2176.93 (8)C5—N2—C3—C4179.64 (12)
Co1—N1—C4—C3−176.03 (9)N1—C1—C2—N256.87 (17)
C1—N1—C4—C355.22 (17)N2—C3—C4—N1−55.84 (18)
D—H···AD—HH···AD···AD—H···A
N2—H2···Cl1i0.854 (19)2.347 (18)3.1794 (16)165.4 (15)
N1—H1···Cl3ii0.83 (2)2.49 (2)3.3192 (17)176.0 (17)
Table 1

Selected bond lengths (Å)

Co1—Cl12.2720 (8)
Co1—Cl22.2419 (10)
Co1—Cl32.2691 (8)
Co1—N12.0686 (15)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯Cl1i 0.854 (19)2.347 (18)3.1794 (16)165.4 (15)
N1—H1⋯Cl3ii 0.83 (2)2.49 (2)3.3192 (17)176.0 (17)

Symmetry codes: (i) ; (ii) .

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