Literature DB >> 24860284

Hexa-aqua-nickel(II) di-hydrogen hypodiphosphate.

Mimoza Gjikaj1, Peng Wu1, Niels-Patrick Pook1.   

Abstract

The asymmetric unit of the title compound, [Ni(H2O)6](H2P2O6), contains one-half of the hexa-aqua-nickel(II) cation and one-half of the di-hydrogen hypodiphosphate anion. In the complex cation, the Ni(2+) atom is located on an inversion center and has an octa-hedral coordination sphere. The P-P distance in the centrosymmetric anion is 2.1853 (7) Å. In the crystal, discrete [Ni(H2O)6](2+) cations and (H2P2O6)(2-) anions are stacked in columns parallel to the c axis and are linked into a three-dimensional network by medium-strength O-H⋯O hydrogen bonds.

Entities:  

Year:  2013        PMID: 24860284      PMCID: PMC4004428          DOI: 10.1107/S1600536813030717

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of hypodiphosphates, see: Leininger & Chulski (1953 ▶). For applications of hypodiphosphates, see: Bloss & Henzel (1967 ▶); Ruflin et al. (2007 ▶); Szklarz et al. (2011 ▶). For the crystal structures of transition metal hypodiphosphate 12-hydrates, see: Hagen & Jansen (1995 ▶); Haag et al. (2005 ▶). For the crystal structures of hydrogen hypodiphosphate compounds, see: Collin & Willis (1971 ▶); Szafranowska et al. (2012 ▶); Wu et al. (2012 ▶).

Experimental

Crystal data

[Ni(H2O)6](H2P2O6) M = 326.76 Monoclinic, a = 9.3031 (14) Å b = 5.8892 (8) Å c = 9.7620 (12) Å β = 96.111 (11)° V = 531.80 (13) Å3 Z = 2 Mo Kα radiation μ = 2.18 mm−1 T = 223 K 0.29 × 0.25 × 0.22 mm

Data collection

Stoe IPDS-II diffractometer Absorption correction: numerical (X-SHAPE and X-RED; Stoe & Cie, 1999 ▶, 2001 ▶) T min = 0.537, T max = 0.619 8061 measured reflections 1601 independent reflections 1546 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.074 S = 1.16 1601 reflections 98 parameters All H-atom parameters refined Δρmax = 0.44 e Å−3 Δρmin = −1.08 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2012 ▶); software used to prepare material for publication: SHELXL97, PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813030717/wm2784sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813030717/wm2784Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(H2O)6](H2P2O6)F(000) = 336
Mr = 326.76block, green
Monoclinic, P21/nDx = 2.041 Mg m3
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 9.3031 (14) ÅCell parameters from 8465 reflections
b = 5.8892 (8) Åθ = 2.9–30.5°
c = 9.7620 (12) ŵ = 2.18 mm1
β = 96.111 (11)°T = 223 K
V = 531.80 (13) Å3Block, green
Z = 20.29 × 0.25 × 0.22 mm
Stoe IPDS-II diffractometer1601 independent reflections
Radiation source: fine-focus sealed tube1546 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.056
ω–scansθmax = 30.5°, θmin = 2.9°
Absorption correction: numerical (X-SHAPE and X-RED; Stoe & Cie, 1999, 2001)h = −13→13
Tmin = 0.537, Tmax = 0.619k = −8→8
8061 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.074All H-atom parameters refined
S = 1.16w = 1/[σ2(Fo2) + (0.0423P)2 + 0.1511P] where P = (Fo2 + 2Fc2)/3
1601 reflections(Δ/σ)max = 0.001
98 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −1.08 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni0.50000.50000.50000.01306 (10)
P0.06859 (3)0.14612 (5)0.53007 (3)0.01116 (10)
O10.20361 (11)0.05887 (19)0.61176 (12)0.0177 (2)
O20.08555 (10)0.28724 (17)0.40289 (10)0.01404 (19)
O3−0.02399 (12)0.28534 (18)0.62787 (11)0.0185 (2)
O40.64678 (11)0.6071 (2)0.65421 (12)0.0211 (2)
O50.48685 (12)0.20885 (19)0.61392 (12)0.0204 (2)
O60.32539 (11)0.62296 (19)0.59655 (12)0.0180 (2)
H3−0.042 (3)0.436 (5)0.605 (3)0.037 (7)*
H4A0.620 (3)0.681 (5)0.719 (3)0.037 (7)*
H4B0.720 (3)0.664 (5)0.630 (3)0.042 (7)*
H5A0.407 (4)0.154 (5)0.607 (3)0.045 (8)*
H5B0.521 (3)0.223 (5)0.696 (3)0.039 (7)*
H6A0.296 (2)0.750 (4)0.581 (2)0.019 (5)*
H6B0.313 (3)0.584 (5)0.678 (3)0.036 (7)*
U11U22U33U12U13U23
Ni0.01080 (13)0.01511 (15)0.01334 (15)−0.00152 (7)0.00159 (9)−0.00086 (8)
P0.00991 (15)0.01073 (17)0.01287 (17)−0.00066 (9)0.00128 (11)0.00094 (10)
O10.0130 (4)0.0173 (4)0.0219 (5)−0.0003 (4)−0.0026 (4)0.0023 (4)
O20.0140 (4)0.0134 (4)0.0151 (5)−0.0015 (3)0.0037 (3)0.0017 (3)
O30.0251 (5)0.0138 (4)0.0179 (5)0.0040 (4)0.0086 (4)0.0022 (4)
O40.0138 (4)0.0332 (6)0.0169 (5)−0.0071 (4)0.0043 (4)−0.0090 (4)
O50.0194 (5)0.0207 (5)0.0204 (5)−0.0044 (4)−0.0005 (4)0.0028 (4)
O60.0180 (5)0.0194 (5)0.0172 (5)0.0040 (4)0.0041 (4)−0.0003 (4)
Ni—O42.0226 (11)P—O31.5814 (11)
Ni—O4i2.0227 (11)P—Pii2.1853 (7)
Ni—O5i2.0544 (11)O3—H30.92 (3)
Ni—O52.0544 (11)O4—H4A0.82 (3)
Ni—O62.0922 (11)O4—H4B0.82 (3)
Ni—O6i2.0922 (11)O5—H5A0.81 (3)
P—O11.5048 (10)O5—H5B0.84 (3)
P—O11.5048 (10)O6—H6A0.81 (2)
P—O21.5161 (10)O6—H6B0.84 (3)
O4—Ni—O4i180.0O1—P—O3109.55 (6)
O4—Ni—O5i93.91 (5)O1—P—O3109.55 (6)
O4i—Ni—O5i86.09 (5)O2—P—O3108.73 (6)
O4—Ni—O586.09 (5)O1—P—Pii107.70 (5)
O4i—Ni—O593.91 (5)O1—P—Pii107.70 (5)
O5i—Ni—O5179.999 (1)O2—P—Pii108.69 (5)
O4—Ni—O692.97 (5)O3—P—Pii103.32 (5)
O4i—Ni—O687.03 (5)O1—O1—P0 (10)
O5i—Ni—O692.80 (5)P—O3—H3116.7 (19)
O5—Ni—O687.20 (5)Ni—O4—H4A119.9 (19)
O4—Ni—O6i87.03 (5)Ni—O4—H4B115 (2)
O4i—Ni—O6i92.97 (5)H4A—O4—H4B109 (3)
O5i—Ni—O6i87.20 (5)Ni—O5—H5A114 (2)
O5—Ni—O6i92.80 (5)Ni—O5—H5B113 (2)
O6—Ni—O6i180.0H5A—O5—H5B112 (3)
O1—P—O10.00 (11)Ni—O6—H6A119.9 (16)
O1—P—O2117.86 (6)Ni—O6—H6B121.2 (19)
O1—P—O2117.86 (6)H6A—O6—H6B111 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3···O2iii0.92 (3)1.68 (3)2.5919 (15)168 (3)
O4—H4A···O3iv0.82 (3)1.93 (3)2.7293 (16)165 (3)
O4—H4B···O2i0.82 (3)1.89 (3)2.6822 (14)162 (3)
O5—H5A···O10.81 (3)1.98 (3)2.7770 (15)171 (3)
O5—H5B···O2v0.84 (3)2.04 (3)2.8722 (16)171 (3)
O6—H6A···O1vi0.81 (2)2.05 (2)2.8163 (16)159 (2)
O6—H6B···O1iv0.84 (3)2.08 (3)2.9132 (17)168 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3⋯O2i 0.92 (3)1.68 (3)2.5919 (15)168 (3)
O4—H4A⋯O3ii 0.82 (3)1.93 (3)2.7293 (16)165 (3)
O4—H4B⋯O2iii 0.82 (3)1.89 (3)2.6822 (14)162 (3)
O5—H5A⋯O10.81 (3)1.98 (3)2.7770 (15)171 (3)
O5—H5B⋯O2iv 0.84 (3)2.04 (3)2.8722 (16)171 (3)
O6—H6A⋯O1v 0.81 (2)2.05 (2)2.8163 (16)159 (2)
O6—H6B⋯O1ii 0.84 (3)2.08 (3)2.9132 (17)168 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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