Literature DB >> 24859358

Genetic susceptibility to type 2 diabetes and obesity: from genome-wide association studies to rare variants and beyond.

Niels Grarup1, Camilla H Sandholt, Torben Hansen, Oluf Pedersen.   

Abstract

During the past 7 years, genome-wide association studies have shed light on the contribution of common genomic variants to the genetic architecture of type 2 diabetes, obesity and related intermediate phenotypes. The discoveries have firmly established more than 175 genomic loci associated with these phenotypes. Despite the tight correlation between type 2 diabetes and obesity, these conditions do not appear to share a common genetic background, since they have few genetic risk loci in common. The recent genetic discoveries do however highlight specific details of the interplay between the pathogenesis of type 2 diabetes, insulin resistance and obesity. The focus is currently shifting towards investigations of data from targeted array-based genotyping and exome and genome sequencing to study the individual and combined effect of low-frequency and rare variants in metabolic disease. Here we review recent progress as regards the concepts, methodologies and derived outcomes of studies of the genetics of type 2 diabetes and obesity, and discuss avenues to be investigated in the future within this research field.

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Mesh:

Year:  2014        PMID: 24859358     DOI: 10.1007/s00125-014-3270-4

Source DB:  PubMed          Journal:  Diabetologia        ISSN: 0012-186X            Impact factor:   10.122


  147 in total

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Journal:  Nat Genet       Date:  2006-05-21       Impact factor: 38.330

5.  Activating mutations in the gene encoding the ATP-sensitive potassium-channel subunit Kir6.2 and permanent neonatal diabetes.

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Journal:  Science       Date:  2007-04-26       Impact factor: 47.728

7.  Rare MTNR1B variants impairing melatonin receptor 1B function contribute to type 2 diabetes.

Authors:  Amélie Bonnefond; Nathalie Clément; Katherine Fawcett; Loïc Yengo; Emmanuel Vaillant; Jean-Luc Guillaume; Aurélie Dechaume; Felicity Payne; Ronan Roussel; Sébastien Czernichow; Serge Hercberg; Samy Hadjadj; Beverley Balkau; Michel Marre; Olivier Lantieri; Claudia Langenberg; Nabila Bouatia-Naji; Guillaume Charpentier; Martine Vaxillaire; Ghislain Rocheleau; Nicholas J Wareham; Robert Sladek; Mark I McCarthy; Christian Dina; Inês Barroso; Ralf Jockers; Philippe Froguel
Journal:  Nat Genet       Date:  2012-01-29       Impact factor: 38.330

8.  Common variants at 10 genomic loci influence hemoglobin A₁(C) levels via glycemic and nonglycemic pathways.

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Journal:  Diabetes       Date:  2010-09-21       Impact factor: 9.461

9.  Genome-wide population-based association study of extremely overweight young adults--the GOYA study.

Authors:  Lavinia Paternoster; David M Evans; Ellen Aagaard Nohr; Claus Holst; Valerie Gaborieau; Paul Brennan; Anette Prior Gjesing; Niels Grarup; Daniel R Witte; Torben Jørgensen; Allan Linneberg; Torsten Lauritzen; Anelli Sandbaek; Torben Hansen; Oluf Pedersen; Katherine S Elliott; John P Kemp; Beate St Pourcain; George McMahon; Diana Zelenika; Jörg Hager; Mark Lathrop; Nicholas J Timpson; George Davey Smith; Thorkild I A Sørensen
Journal:  PLoS One       Date:  2011-09-15       Impact factor: 3.240

10.  A meta-analysis identifies new loci associated with body mass index in individuals of African ancestry.

Authors:  Keri L Monda; Gary K Chen; Kira C Taylor; Cameron Palmer; Todd L Edwards; Leslie A Lange; Maggie C Y Ng; Adebowale A Adeyemo; Matthew A Allison; Lawrence F Bielak; Guanjie Chen; Mariaelisa Graff; Marguerite R Irvin; Suhn K Rhie; Guo Li; Yongmei Liu; Youfang Liu; Yingchang Lu; Michael A Nalls; Yan V Sun; Mary K Wojczynski; Lisa R Yanek; Melinda C Aldrich; Adeyinka Ademola; Christopher I Amos; Elisa V Bandera; Cathryn H Bock; Angela Britton; Ulrich Broeckel; Quiyin Cai; Neil E Caporaso; Chris S Carlson; John Carpten; Graham Casey; Wei-Min Chen; Fang Chen; Yii-Der I Chen; Charleston W K Chiang; Gerhard A Coetzee; Ellen Demerath; Sandra L Deming-Halverson; Ryan W Driver; Patricia Dubbert; Mary F Feitosa; Ye Feng; Barry I Freedman; Elizabeth M Gillanders; Omri Gottesman; Xiuqing Guo; Talin Haritunians; Tamara Harris; Curtis C Harris; Anselm J M Hennis; Dena G Hernandez; Lorna H McNeill; Timothy D Howard; Barbara V Howard; Virginia J Howard; Karen C Johnson; Sun J Kang; Brendan J Keating; Suzanne Kolb; Lewis H Kuller; Abdullah Kutlar; Carl D Langefeld; Guillaume Lettre; Kurt Lohman; Vaneet Lotay; Helen Lyon; Joann E Manson; William Maixner; Yan A Meng; Kristine R Monroe; Imran Morhason-Bello; Adam B Murphy; Josyf C Mychaleckyj; Rajiv Nadukuru; Katherine L Nathanson; Uma Nayak; Amidou N'diaye; Barbara Nemesure; Suh-Yuh Wu; M Cristina Leske; Christine Neslund-Dudas; Marian Neuhouser; Sarah Nyante; Heather Ochs-Balcom; Adesola Ogunniyi; Temidayo O Ogundiran; Oladosu Ojengbede; Olufunmilayo I Olopade; Julie R Palmer; Edward A Ruiz-Narvaez; Nicholette D Palmer; Michael F Press; Evandine Rampersaud; Laura J Rasmussen-Torvik; Jorge L Rodriguez-Gil; Babatunde Salako; Eric E Schadt; Ann G Schwartz; Daniel A Shriner; David Siscovick; Shad B Smith; Sylvia Wassertheil-Smoller; Elizabeth K Speliotes; Margaret R Spitz; Lara Sucheston; Herman Taylor; Bamidele O Tayo; Margaret A Tucker; David J Van Den Berg; Digna R Velez Edwards; Zhaoming Wang; John K Wiencke; Thomas W Winkler; John S Witte; Margaret Wrensch; Xifeng Wu; James J Yang; Albert M Levin; Taylor R Young; Neil A Zakai; Mary Cushman; Krista A Zanetti; Jing Hua Zhao; Wei Zhao; Yonglan Zheng; Jie Zhou; Regina G Ziegler; Joseph M Zmuda; Jyotika K Fernandes; Gary S Gilkeson; Diane L Kamen; Kelly J Hunt; Ida J Spruill; Christine B Ambrosone; Stefan Ambs; Donna K Arnett; Larry Atwood; Diane M Becker; Sonja I Berndt; Leslie Bernstein; William J Blot; Ingrid B Borecki; Erwin P Bottinger; Donald W Bowden; Gregory Burke; Stephen J Chanock; Richard S Cooper; Jingzhong Ding; David Duggan; Michele K Evans; Caroline Fox; W Timothy Garvey; Jonathan P Bradfield; Hakon Hakonarson; Struan F A Grant; Ann Hsing; Lisa Chu; Jennifer J Hu; Dezheng Huo; Sue A Ingles; Esther M John; Joanne M Jordan; Edmond K Kabagambe; Sharon L R Kardia; Rick A Kittles; Phyllis J Goodman; Eric A Klein; Laurence N Kolonel; Loic Le Marchand; Simin Liu; Barbara McKnight; Robert C Millikan; Thomas H Mosley; Badri Padhukasahasram; L Keoki Williams; Sanjay R Patel; Ulrike Peters; Curtis A Pettaway; Patricia A Peyser; Bruce M Psaty; Susan Redline; Charles N Rotimi; Benjamin A Rybicki; Michèle M Sale; Pamela J Schreiner; Lisa B Signorello; Andrew B Singleton; Janet L Stanford; Sara S Strom; Michael J Thun; Mara Vitolins; Wei Zheng; Jason H Moore; Scott M Williams; Shamika Ketkar; Xiaofeng Zhu; Alan B Zonderman; Charles Kooperberg; George J Papanicolaou; Brian E Henderson; Alex P Reiner; Joel N Hirschhorn; Ruth J F Loos; Kari E North; Christopher A Haiman
Journal:  Nat Genet       Date:  2013-04-14       Impact factor: 38.330

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  74 in total

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Authors:  Yuan Lin; Jennifer Wessel
Journal:  Curr Diab Rep       Date:  2019-02-26       Impact factor: 4.810

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Journal:  Berl Munch Tierarztl Wochenschr       Date:  1996-09       Impact factor: 0.328

Review 3.  Nonalcoholic fatty liver disease and type 2 diabetes: common pathophysiologic mechanisms.

Authors:  Chiara Saponaro; Melania Gaggini; Amalia Gastaldelli
Journal:  Curr Diab Rep       Date:  2015-06       Impact factor: 4.810

Review 4.  Neurological consequences of obesity.

Authors:  Phillipe D O'Brien; Lucy M Hinder; Brian C Callaghan; Eva L Feldman
Journal:  Lancet Neurol       Date:  2017-06       Impact factor: 44.182

Review 5.  Overview of genomics and post-genomics research on type 2 diabetes mellitus: Future perspectives and a framework for further studies.

Authors:  Battini Mohan Reddy; Rayabarapu Pranavchand; S A A Latheef
Journal:  J Biosci       Date:  2019-03       Impact factor: 1.826

Review 6.  Hepatocellular Carcinoma in Obesity, Type 2 Diabetes, and NAFLD.

Authors:  Helen L Reeves; Marco Y W Zaki; Christopher P Day
Journal:  Dig Dis Sci       Date:  2016-02-26       Impact factor: 3.199

7.  New animal models reveal that coenzyme Q2 (Coq2) and placenta-specific 8 (Plac8) are candidate genes for the onset of type 2 diabetes associated with obesity in rats.

Authors:  Daiki Sasaki; Jun Kotoh; Risa Watadani; Kozo Matsumoto
Journal:  Mamm Genome       Date:  2015-08-22       Impact factor: 2.957

Review 8.  Considerations and guidelines for mouse metabolic phenotyping in diabetes research.

Authors:  Thierry Alquier; Vincent Poitout
Journal:  Diabetologia       Date:  2017-11-16       Impact factor: 10.122

9.  Mitochondrial oxidative phosphorylation is impaired in TALLYHO mice, a new obesity and type 2 diabetes animal model.

Authors:  Caroline A Hunter; Funda Kartal; Zeynep C Koc; Tamara Murphy; Jung Han Kim; James Denvir; Emine C Koc
Journal:  Int J Biochem Cell Biol       Date:  2019-09-19       Impact factor: 5.085

10.  Association of genetic variants in INS (rs689), INSR (rs1799816) and PP1G.G (rs1799999) with type 2 diabetes (T2D): a case-control study in three ethnic groups from North-West India.

Authors:  Jasmine Sokhi; Ruhi Sikka; Priyanka Raina; Ramandeep Kaur; Kawaljit Matharoo; Punit Arora; Ajs Bhanwer
Journal:  Mol Genet Genomics       Date:  2015-08-07       Impact factor: 3.291

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