Literature DB >> 24857374

Application of COI barcode sequence for the identification of snake medicine (Zaocys).

Shuping Cao1, Linong Guo2, Huiming Luo2, Hang Yuan1, Shuyun Chen2, Jian Zheng2, Ruichao Lin1.   

Abstract

Counterfeits in the medicine market make the authentication of snakes used for Chinese medicine a challenge to Chinese drug regulatory control agencies. This paper explores existing methods that can be used to quickly and accurately distinguish Zaocys (Z. dhumnades) from its counterfeits for routine identification of snake meats in food and drug control laboratories. In this research, the Cytochrome Oxidase I (COI) fragments of 51 samples from 17 species of snakes were amplified using Polymerase Chain Reaction (PCR) and sequenced. The inter- and intra-specific variations of COI sequences were analyzed and compared based on Kimura-2-parameter (K-2P) distances; the minimal interspecific K-2P distance was 0.0934, which was bigger than the maximum intraspecific K-2P distance in Z. dhumnades (0.0523), indicating that Zaocys can be separated from its counterfeits. The Neighbor-Joining (N-J) tree of the snakes was constructed and the results show that snakes of the same species cluster with 100% bootstrap values. Since the Zaocys and its counterfeits are of different species, they can be distinguished using the N-J tree method. Another 10 samples of Zaocys from markets and drug stores were identified at the species level, among which 5 samples were proven to be the counterfeits--Ptyas korros.

Entities:  

Keywords:  Cytochrome Oxidase I; DNA barcoding; Zaocys; mitochondrial DNA

Mesh:

Substances:

Year:  2014        PMID: 24857374     DOI: 10.3109/19401736.2014.905828

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  5 in total

1.  Phylogeography of the reticulated python (Malayopython reticulatus ssp.): Conservation implications for the worlds' most traded snake species.

Authors:  Gillian Murray-Dickson; Muhammad Ghazali; Rob Ogden; Rafe Brown; Mark Auliya
Journal:  PLoS One       Date:  2017-08-17       Impact factor: 3.240

Review 2.  DNA Barcoding for the Identification and Authentication of Animal Species in Traditional Medicine.

Authors:  Fan Yang; Fei Ding; Hong Chen; Mingqi He; Shixin Zhu; Xin Ma; Li Jiang; Haifeng Li
Journal:  Evid Based Complement Alternat Med       Date:  2018-04-22       Impact factor: 2.629

3.  Homogeneous fluorescent specific PCR for the authentication of medicinal snakes using cationic conjugated polymers.

Authors:  Chao Jiang; Yuan Yuan; Libing Liu; Jingyi Hou; Yan Jin; Luqi Huang
Journal:  Sci Rep       Date:  2015-11-05       Impact factor: 4.379

Review 4.  Application of Molecular Methods in the Identification of Ingredients in Chinese Herbal Medicines.

Authors:  Ke Han; Miao Wang; Lei Zhang; Chunyu Wang
Journal:  Molecules       Date:  2018-10-22       Impact factor: 4.411

5.  Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification.

Authors:  Qing Huang; Zhiwu Li; Zhiguo Ma; He Li; Runqian Mao
Journal:  Biosci Rep       Date:  2019-02-22       Impact factor: 3.840

  5 in total

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