Literature DB >> 24850134

The expression of PHO92 is regulated by Gcr1, and Pho92 is involved in glucose metabolism in Saccharomyces cerevisiae.

Hyun-Jun Kang1, Miwha Chang, Chang-Min Kang, Yong-Sung Park, Bong-June Yoon, Tae-Hyoung Kim, Cheol-Won Yun.   

Abstract

Ydr374c (Pho92) contains a YTH domain in its C-terminal region and is a human YTHDF2 homologue. Previously, we reported that Pho92 regulates phosphate metabolism by regulating PHO4 mRNA stability. In this study, we found that growth of the ∆pho92 strain on SG media was slower than that of the wild type and that PHO92 expression was up-regulated by non-fermentable carbon sources, such as ethanol and glycerol, but not by fermentable carbon sources. Furthermore, two conserved Gcr1-binding regions were identified in the upstream, untranslated region of PHO92. Gcr1 is an important factor involved in the coordinated regulation of glycolytic gene expression. Mutation of two Gcr1-binding sites of the PHO92 upstream region resulted in a growth defect on SD media. Finally, mutagenesis of the Gcr1-binding sites of the PHO92 upstream region and deletion of GCR1 resulted in up-regulation of PHO92, and this resulted from inhibition of PHO4 mRNA degradation. Based on these results, we suggest that Gcr1 regulates the expression of PHO92, and Pho92 is involved in glucose metabolism.

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Year:  2014        PMID: 24850134     DOI: 10.1007/s00294-014-0430-5

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  24 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  Transcription of the HXT4 gene is regulated by Gcr1p and Gcr2p in the yeast S. cerevisiae.

Authors:  S Türkel; L F Bisson
Journal:  Yeast       Date:  1999-08       Impact factor: 3.239

3.  Structure and function of cyclin-dependent Pho85 kinase of Saccharomyces cerevisiae.

Authors:  Akio Toh-E; Masafumi Nishizawa
Journal:  J Gen Appl Microbiol       Date:  2001-06       Impact factor: 1.452

4.  Expression of GUT1, which encodes glycerol kinase in Saccharomyces cerevisiae, is controlled by the positive regulators Adr1p, Ino2p and Ino4p and the negative regulator Opi1p in a carbon source-dependent fashion.

Authors:  M Grauslund; J M Lopes; B Rønnow
Journal:  Nucleic Acids Res       Date:  1999-11-15       Impact factor: 16.971

5.  Genetic evidence for a morphogenetic function of the Saccharomyces cerevisiae Pho85 cyclin-dependent kinase.

Authors:  M E Lenburg; E K O'Shea
Journal:  Genetics       Date:  2001-01       Impact factor: 4.562

Review 6.  Pho85 and signaling environmental conditions.

Authors:  Adam S Carroll; Erin K O'Shea
Journal:  Trends Biochem Sci       Date:  2002-02       Impact factor: 13.807

Review 7.  Pho85, a multifunctional cyclin-dependent protein kinase in budding yeast.

Authors:  Dongqing Huang; Helena Friesen; Brenda Andrews
Journal:  Mol Microbiol       Date:  2007-09-10       Impact factor: 3.501

8.  Genetic background affects relative nonsense mRNA accumulation in wild-type and upf mutant yeast strains.

Authors:  Bessie Kebaara; Tara Nazarenus; Rachel Taylor; Audrey L Atkin
Journal:  Curr Genet       Date:  2003-04-15       Impact factor: 3.886

9.  The GCR1 requirement for yeast glycolytic gene expression is suppressed by dominant mutations in the SGC1 gene, which encodes a novel basic-helix-loop-helix protein.

Authors:  K Nishi; C S Park; A E Pepper; G Eichinger; M A Innis; M J Holland
Journal:  Mol Cell Biol       Date:  1995-05       Impact factor: 4.272

10.  Mutations in GCR1 affect SUC2 gene expression in Saccharomyces cerevisiae.

Authors:  S Türkel; T Turgut; M C López; H Uemura; H V Baker
Journal:  Mol Genet Genomics       Date:  2003-02-25       Impact factor: 3.291

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  7 in total

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Review 2.  Responses to phosphate deprivation in yeast cells.

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Journal:  Curr Genet       Date:  2015-11-28       Impact factor: 3.886

3.  Expression pattern and phenotypic characterization of the mutant strain reveals target genes and processes regulated by pka1 in the dimorphic fission yeast Schizosaccharomyces japonicus.

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Review 4.  Reprogramming of nonfermentative metabolism by stress-responsive transcription factors in the yeast Saccharomyces cerevisiae.

Authors:  Nitnipa Soontorngun
Journal:  Curr Genet       Date:  2016-05-14       Impact factor: 3.886

5.  Less is more: Nutrient limitation induces cross-talk of nutrient sensing pathways with NAD+ homeostasis and contributes to longevity.

Authors:  Felicia Tsang; Su-Ju Lin
Journal:  Front Biol (Beijing)       Date:  2015-07-30

Review 6.  Cracking the epitranscriptome.

Authors:  Schraga Schwartz
Journal:  RNA       Date:  2016-02       Impact factor: 4.942

7.  Core regulatory components of the PHO pathway are conserved in the methylotrophic yeast Hansenula polymorpha.

Authors:  Ying Zhou; Naoya Yuikawa; Hiroki Nakatsuka; Hiromi Maekawa; Satoshi Harashima; Yoichi Nakanishi; Yoshinobu Kaneko
Journal:  Curr Genet       Date:  2016-01-21       Impact factor: 3.886

  7 in total

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