Literature DB >> 24849882

A Minimum Data Set for Sharing Biobank Samples, Information, and Data: MIABIS.

Loreana Norlin1, Martin N Fransson, Mikael Eriksson, Roxana Merino-Martinez, Maria Anderberg, Sanela Kurtovic, Jan-Eric Litton.   

Abstract

Numerous successful scientific results have emerged from projects using shared biobanked samples and data. In order to facilitate the discovery of underutilized biobank samples, it would be helpful if a global biobank register containing descriptive information about the samples existed. But first, for shared data to be comparable, it needs to be harmonized. In compliance with the aim of BBMRI (Biobanking and Biomolecular Resources Research Infrastructure), to harmonize biobanking across Europe, and the conclusion that the move towards a universal information infrastructure for biobanking is directly connected to the issues of semantic interoperability through standardized message formats and controlled terminologies, we have developed an updated version of the minimum data set for biobanks and studies using human biospecimens. The data set called MIABIS (Minimum Information About BIobank data Sharing) consists of 52 attributes describing a biobank's content. The aim is to facilitate data discovery through harmonization of data elements describing a biobank at the aggregate level. As many biobanks across Europe possess a tremendous amount of samples that are underutilized, this would help pave the way for biobank networking on a national and international level, resulting in time and cost savings and faster emergence of new scientific results.

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Year:  2012        PMID: 24849882     DOI: 10.1089/bio.2012.0003

Source DB:  PubMed          Journal:  Biopreserv Biobank        ISSN: 1947-5543            Impact factor:   2.300


  31 in total

Review 1.  Enhancing translational research in paediatric rheumatology through standardization.

Authors:  Rae S M Yeung; Salvatore Albani; Brian M Feldman; Elizabeth Mellins; Berent Prakken; Lucy R Wedderburn
Journal:  Nat Rev Rheumatol       Date:  2016-09-22       Impact factor: 20.543

2.  A data standard for sourcing fit-for-purpose biological samples in an integrated virtual network of biobanks.

Authors:  Philip R Quinlan; Gita Mistry; Helen Bullbeck; Anne Carter
Journal:  Biopreserv Biobank       Date:  2014-04-30       Impact factor: 2.300

3.  Toward a common language for biobanking.

Authors:  Martin N Fransson; Emmanuelle Rial-Sebbag; Mathias Brochhausen; Jan-Eric Litton
Journal:  Eur J Hum Genet       Date:  2014-04-09       Impact factor: 4.246

Review 4.  Bridging gaps between images and data: a systematic update on imaging biobanks.

Authors:  Michela Gabelloni; Lorenzo Faggioni; Rita Borgheresi; Giuliana Restante; Jorge Shortrede; Lorenzo Tumminello; Camilla Scapicchio; Francesca Coppola; Dania Cioni; Ignacio Gómez-Rico; Luis Martí-Bonmatí; Emanuele Neri
Journal:  Eur Radiol       Date:  2022-01-10       Impact factor: 5.315

Review 5.  Role of Biobanks for Cancer Research and Precision Medicine in Hepatocellular Carcinoma.

Authors:  Peyda Korhan; Sanem Tercan Avcı; Yeliz Yılmaz; Yasemin Öztemur Islakoğlu; Neşe Atabey
Journal:  J Gastrointest Cancer       Date:  2021-11-22

6.  FarGen - participants in the genetic research infrastructure of the Faroe Islands.

Authors:  Katrin D Apol; Leivur N Lydersen; Ólavur Mortensen; Pál Weihe; Bjarni Á Steig; Guðrið Andorsdóttir; Noomi O Gregersen
Journal:  Scand J Public Health       Date:  2021-10-05       Impact factor: 3.199

Review 7.  A critical analysis of cancer biobank practices in relation to biospecimen quality.

Authors:  Amanda Rush; Kevin Spring; Jennifer A Byrne
Journal:  Biophys Rev       Date:  2015-10-22

8.  Driving innovation through collaboration: development of clinical annotation datasets for brain cancer biobanking.

Authors:  Craig Gedye; Mythily Sachchithananthan; Robyn Leonard; Rosalind L Jeffree; Michael E Buckland; David S Ziegler; Manuel B Graeber; Bryan W Day; Kerrie L McDonald; Arian Lasocki; Anna K Nowak
Journal:  Neurooncol Pract       Date:  2019-08-27

9.  Biomedical imaging ontologies: A survey and proposal for future work.

Authors:  Barry Smith; Sivaram Arabandi; Mathias Brochhausen; Michael Calhoun; Paolo Ciccarese; Scott Doyle; Bernard Gibaud; Ilya Goldberg; Charles E Kahn; James Overton; John Tomaszewski; Metin Gurcan
Journal:  J Pathol Inform       Date:  2015-06-23

10.  The Informatics Challenges Facing Biobanks: A Perspective from a United Kingdom Biobanking Network.

Authors:  Philip R Quinlan; Martin Groves; Lee B Jordan; Hilary Stobart; Colin A Purdie; Alastair M Thompson
Journal:  Biopreserv Biobank       Date:  2015-09-29       Impact factor: 2.300

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