Literature DB >> 24849049

Enhancing the activity of Bacillus circulans xylanase by modulating the flexibility of the hinge region.

Fukura Kazuyo1, So Yeon Hong, Young Joo Yeon, Jeong Chan Joo, Young Je Yoo.   

Abstract

Enzymes undergo multiple conformational changes in solution, and these dynamics are considered to play a critical role in enzyme activity. Hinge-bending motions, resulting from reciprocal movements of dynamical quasi-rigid bodies, are thought to be related to turnover rate and are affected by the physical properties of the hinge regions. In this study, hinge identification and flexibility modification of the regions by mutagenesis were conducted to explore the relationship between hinge flexibility and catalytic activity. Bacillus circulans xylanase was selected for the identification and mutation of the hinge regions. As a result, turnover rate (V(max)) was improved approximately twofold in mutants that have more rigid hinge structure, despite the decrease in K(m) and V(max)/K(m). This result indicates that the rigidly mutated hinge has positive effects on B. circulans xylanase activity.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24849049     DOI: 10.1007/s10295-014-1454-z

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  22 in total

1.  Structural principles governing domain motions in proteins.

Authors:  S Hayward
Journal:  Proteins       Date:  1999-09-01

Review 2.  Biotechnology of microbial xylanases: enzymology, molecular biology, and application.

Authors:  S Subramaniyan; P Prema
Journal:  Crit Rev Biotechnol       Date:  2002       Impact factor: 8.429

3.  An efficient one-step site-directed and site-saturation mutagenesis protocol.

Authors:  Lei Zheng; Ulrich Baumann; Jean-Louis Reymond
Journal:  Nucleic Acids Res       Date:  2004-08-10       Impact factor: 16.971

4.  Hydrophobic interaction network analysis for thermostabilization of a mesophilic xylanase.

Authors:  Taeho Kim; Jeong Chan Joo; Young Je Yoo
Journal:  J Biotechnol       Date:  2012-05-27       Impact factor: 3.307

5.  Constrained geometric simulation of diffusive motion in proteins.

Authors:  Stephen Wells; Scott Menor; Brandon Hespenheide; M F Thorpe
Journal:  Phys Biol       Date:  2005-11-09       Impact factor: 2.583

6.  Functional conformational changes of endo-1,4-xylanase II from Trichoderma reesei: a molecular dynamics study.

Authors:  J Muilu; A Törrönen; M Peräkylä; J Rouvinen
Journal:  Proteins       Date:  1998-06-01

7.  Systematic analysis of domain motions in proteins from conformational change: new results on citrate synthase and T4 lysozyme.

Authors:  S Hayward; H J Berendsen
Journal:  Proteins       Date:  1998-02-01

8.  Modification of a PCR-based site-directed mutagenesis method.

Authors:  C L Fisher; G K Pei
Journal:  Biotechniques       Date:  1997-10       Impact factor: 1.993

9.  Thermostabilization of Bacillus circulans xylanase: computational optimization of unstable residues based on thermal fluctuation analysis.

Authors:  Jeong Chan Joo; Seung Pil Pack; Yong Hwan Kim; Young Je Yoo
Journal:  J Biotechnol       Date:  2010-10-17       Impact factor: 3.307

10.  Overexpression of the Bacillus subtilis and circulans xylanases in Escherichia coli.

Authors:  W L Sung; C K Luk; D M Zahab; W Wakarchuk
Journal:  Protein Expr Purif       Date:  1993-06       Impact factor: 1.650

View more
  1 in total

1.  The Emergence of New Catalytic Abilities in an Endoxylanase from Family GH10 by Removing an Intrinsically Disordered Region.

Authors:  Carlos Gil-Durán; Romina V Sepúlveda; Maximiliano Rojas; Víctor Castro-Fernández; Victoria Guixé; Inmaculada Vaca; Gloria Levicán; Fernando D González-Nilo; María-Cristina Ravanal; Renato Chávez
Journal:  Int J Mol Sci       Date:  2022-02-19       Impact factor: 5.923

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.