Literature DB >> 24846917

[Current status and perspective of RAD-seq in genomic research].

Yangkun Wang1, Yan Hu1, Tianzhen Zhang1.   

Abstract

The restriction-site associated DNA sequencing (RAD-seq) is a high-throughput sequencing technique developed from the next-generation sequencing (NGS). This method can reduce the representation of the complex genome while mapping thousands of polymorphic markers with or without a reference genome. It has been extensively used for high-density genetic map construction, fine mapping of important genes, genome sequence assembly, population genomic research, as well as phylogenetic research and so on. Here, we introduce the technological principle and development of RAD-seq combined with the sequencing applications in various species. Due to its uniqueness, RAD-seq will have a wide application in genetic analysis of complex genomic research in the future.

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Year:  2014        PMID: 24846917     DOI: 10.3724/sp.j.1005.2014.00041

Source DB:  PubMed          Journal:  Yi Chuan        ISSN: 0253-9772


  3 in total

1.  Identification of SNPs in a nonmodel macrofungus (Lepista nuda, Basidiomycota) through RAD sequencing.

Authors:  Fei Ye; Xiao-Dan Yu; Qing Wang; Peng Zhao
Journal:  Springerplus       Date:  2016-10-13

2.  Construction of a high-density genetic map and fine mapping of a candidate gene locus for a novel branched-spike mutant in barley.

Authors:  Weibin Wang; Junyu He; Shengwei Chen; Peng Peng; Wei Zhong; Xintian Wang; Tingting Zhang; Yuping Li
Journal:  PLoS One       Date:  2020-01-08       Impact factor: 3.240

3.  Exploring the genomic resources and analysing the genetic diversity and population structure of Chinese indigenous rabbit breeds by RAD-seq.

Authors:  Chenmiao Liu; Shuhui Wang; Xianggui Dong; Jiping Zhao; Xiangyang Ye; Ruiguang Gong; Zhanjun Ren
Journal:  BMC Genomics       Date:  2021-07-26       Impact factor: 3.969

  3 in total

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