Literature DB >> 24846693

Integrative assessment of benzene exposure to Caenorhabditis elegans using computational behavior and toxicogenomic analyses.

Hyun-Jeong Eom1, Hungsoo Kim, Bo-Moon Kim, Tae-Soo Chon, Jinhee Choi.   

Abstract

In this study, we investigated the toxic effects of benzene to the nematode Caenorhabditis elegans in an integrative manner, using computational behavior and toxicogenomics analyses, along with survival and reproduction. Benzene exposure led to changes in locomotive behavior and reproduction decline in C. elegans. Microarray followed by pathway analysis revealed that 228 genes were differentially expressed by benzene exposure, and cyp-35a2, pmk-1, and cep-1 were selected for further reproduction and multiparametric behavior analysis. Mutant analysis showed that benzene induced reproduction decline was rescued in cyp-35a2(gk317) mutant, whereas it was significantly exacerbated in pmk-1(km25) mutant, compared with the wildtype. The multiparametric behavior analysis on the mutants of selected genes revealed that each strain exhibits different response patterns, particularly, enhanced linear movement in the cyp-35a2(gk317) mutant, whereas the changes in partial body movement were observed in the pmk-1(km25) mutant by benzene exposure. A self-organizing map revealed that the pmk-1(km25) mutant group was the most densely clustered and located on the opposite side of the map of the cyp-35a2(gk317) mutant, each crossing that of the wildtype. Overall results suggest distinct roles of cyp-35a2 and pmk-1 genes in benzene-induced alterations in behavior and reproduction in C. elegans. This study also suggests computational behavior analysis is a suitable tool for addressing the integrative impact of chemical stress alongside with toxicogenomic approach.

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Year:  2014        PMID: 24846693     DOI: 10.1021/es500608e

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  3 in total

1.  Ecotoxicological impacts of surface water and wastewater from conventional and advanced treatment technologies on brood size, larval length, and cytochrome P450 (35A3) expression in Caenorhabditis elegans.

Authors:  Aennes Abbas; Lucie Valek; Ilona Schneider; Anna Bollmann; Gregor Knopp; Wolfram Seitz; Ulrike Schulte-Oehlmann; Jörg Oehlmann; Martin Wagner
Journal:  Environ Sci Pollut Res Int       Date:  2018-03-06       Impact factor: 4.223

2.  Implementation of Fractal Dimension and Self-Organizing Map to Detect Toxic Effects of Toluene on Movement Tracks of Daphnia magna.

Authors:  Yuedan Liu; Chunlei Xia; Zhongya Fan; Renren Wu; Xianglin Chen; Zuoyi Liu
Journal:  J Toxicol       Date:  2018-02-26

3.  Analyzing the Response Behavior of Lumbriculus variegatus (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map.

Authors:  Chang Woo Ji; Young-Seuk Park; Yongde Cui; Hongzhu Wang; Ihn-Sil Kwak; Tae-Soo Chon
Journal:  Int J Environ Res Public Health       Date:  2020-04-11       Impact factor: 3.390

  3 in total

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