Literature DB >> 24838876

Constructing synthetic microbial communities to explore the ecology and evolution of symbiosis.

Adam James Waite1, Wenying Shou.   

Abstract

Synthetically engineered microbial communities based on model organisms provide a simplified model of their naturally occurring counterparts while still retaining essential features of living organisms. The degree of control afforded by this approach has been critical in understanding how similar types of natural communities might have persisted and evolved. Here, we first discuss important considerations when designing a synthetically engineered system. Then, we describe the steps required to create a two-partner cooperative system based on the yeast Saccharomyces cerevisiae.

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Year:  2014        PMID: 24838876     DOI: 10.1007/978-1-4939-0554-6_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  6 in total

1.  High-throughput quantification of microbial birth and death dynamics using fluorescence microscopy.

Authors:  Samuel F M Hart; David Skelding; Adam J Waite; Justin C Burton; Wenying Shou
Journal:  Quant Biol       Date:  2019-01-04

2.  Opportunistic Sampling of Roadkill as an Entry Point to Accessing Natural Products Assembled by Bacteria Associated with Non-anthropoidal Mammalian Microbiomes.

Authors:  Jeremy L Motley; Blake W Stamps; Carter A Mitchell; Alec T Thompson; Jayson Cross; Jianlan You; Douglas R Powell; Bradley S Stevenson; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2016-11-21       Impact factor: 4.050

3.  Uncovering and resolving challenges of quantitative modeling in a simplified community of interacting cells.

Authors:  Samuel F M Hart; Hanbing Mi; Robin Green; Li Xie; Jose Mario Bello Pineda; Babak Momeni; Wenying Shou
Journal:  PLoS Biol       Date:  2019-02-22       Impact factor: 8.029

4.  Disentangling strictly self-serving mutations from win-win mutations in a mutualistic microbial community.

Authors:  Samuel Frederick Mock Hart; Jose Mario Bello Pineda; Chi-Chun Chen; Robin Green; Wenying Shou
Journal:  Elife       Date:  2019-06-04       Impact factor: 8.713

5.  Artificial cell-cell communication as an emerging tool in synthetic biology applications.

Authors:  Stefan Hennig; Gerhard Rödel; Kai Ostermann
Journal:  J Biol Eng       Date:  2015-08-12       Impact factor: 4.355

6.  Metabolic excretion associated with nutrient-growth dysregulation promotes the rapid evolution of an overt metabolic defect.

Authors:  Robin Green; Lin Wang; Samuel F M Hart; Wenyun Lu; David Skelding; Justin C Burton; Hanbing Mi; Aric Capel; Hung Alex Chen; Aaron Lin; Arvind R Subramaniam; Joshua D Rabinowitz; Wenying Shou
Journal:  PLoS Biol       Date:  2020-08-24       Impact factor: 9.593

  6 in total

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