Literature DB >> 24837923

Metabolomics combined with chemometric tools (PCA, HCA, PLS-DA and SVM) for screening cassava (Manihot esculenta Crantz) roots during postharvest physiological deterioration.

Virgílio Gavicho Uarrota1, Rodolfo Moresco2, Bianca Coelho2, Eduardo da Costa Nunes3, Luiz Augusto Martins Peruch3, Enilto de Oliveira Neubert3, Miguel Rocha4, Marcelo Maraschin5.   

Abstract

Cassava roots are an important source of dietary and industrial carbohydrates and suffer markedly from postharvest physiological deterioration (PPD). This paper deals with metabolomics combined with chemometric tools for screening the chemical and enzymatic composition in several genotypes of cassava roots during PPD. Metabolome analyses showed increases in carotenoids, flavonoids, anthocyanins, phenolics, reactive scavenging species, and enzymes (superoxide dismutase family, hydrogen peroxide, and catalase) until 3-5days postharvest. PPD correlated negatively with phenolics and carotenoids and positively with anthocyanins and flavonoids. Chemometric tools such as principal component analysis, partial least squares discriminant analysis, and support vector machines discriminated well cassava samples and enabled a good prediction of samples. Hierarchical clustering analyses grouped samples according to their levels of PPD and chemical compositions.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Cassava; Chemometrics; Metabolomics; Postharvest deterioration

Mesh:

Substances:

Year:  2014        PMID: 24837923     DOI: 10.1016/j.foodchem.2014.03.110

Source DB:  PubMed          Journal:  Food Chem        ISSN: 0308-8146            Impact factor:   7.514


  19 in total

Review 1.  Plant metabolomics: a new strategy and tool for quality evaluation of Chinese medicinal materials.

Authors:  Qi Xiao; Xinlu Mu; Jiushi Liu; Bin Li; Haitao Liu; Bengang Zhang; Peigen Xiao
Journal:  Chin Med       Date:  2022-04-08       Impact factor: 5.455

Review 2.  Linking metabolomics data to underlying metabolic regulation.

Authors:  Thomas Nägele
Journal:  Front Mol Biosci       Date:  2014-11-06

3.  Toward better understanding of postharvest deterioration: biochemical changes in stored cassava (Manihot esculenta Crantz) roots.

Authors:  Virgílio Gavicho Uarrota; Eduardo da Costa Nunes; Luiz Augusto Martins Peruch; Enilto de Oliveira Neubert; Bianca Coelho; Rodolfo Moresco; Moralba Garcia Domínguez; Teresa Sánchez; Jorge Luis Luna Meléndez; Dominique Dufour; Hernan Ceballos; Luis Augusto Becerra Lopez-Lavalle; Clair Hershey; Miguel Rocha; Marcelo Maraschin
Journal:  Food Sci Nutr       Date:  2015-10-26       Impact factor: 2.863

4.  Gene expression atlas for the food security crop cassava.

Authors:  Mark C Wilson; Andrew M Mutka; Aaron W Hummel; Jeffrey Berry; Raj Deepika Chauhan; Anupama Vijayaraghavan; Nigel J Taylor; Daniel F Voytas; Daniel H Chitwood; Rebecca S Bart
Journal:  New Phytol       Date:  2017-01-24       Impact factor: 10.151

Review 5.  Cassava postharvest physiological deterioration: a complex phenomenon involving calcium signaling, reactive oxygen species and programmed cell death.

Authors:  Astride S M Djabou; Luiz J C B Carvalho; Qing X Li; Nicolas Niemenak; Songbi Chen
Journal:  Acta Physiol Plant       Date:  2017-03-03       Impact factor: 2.354

6.  Proteomic analysis of injured storage roots in cassava (Manihot esculenta Crantz) under postharvest physiological deterioration.

Authors:  Yuling Qin; Astride Stéphanie Mouafi Djabou; Feifei An; Kaimian Li; Zhaogui Li; Long Yang; Xiaojing Wang; Songbi Chen
Journal:  PLoS One       Date:  2017-03-24       Impact factor: 3.240

7.  Selected metabolites profiling of Orthosiphon stamineus Benth leaves extracts combined with chemometrics analysis and correlation with biological activities.

Authors:  Noor Hafizoh Saidan; Mohd Shahrul Ridzuan Hamil; Abdul Hakeem Memon; Maha Mansour Abdelbari; Mohammad Razak Hamdan; Khamsah Suryati Mohd; Amin Malik Shah Abdul Majid; Zhari Ismail
Journal:  BMC Complement Altern Med       Date:  2015-10-07       Impact factor: 3.659

8.  Metabolomic, enzymatic, and histochemical analyzes of cassava roots during postharvest physiological deterioration.

Authors:  Virgílio Gavicho Uarrota; Marcelo Maraschin
Journal:  BMC Res Notes       Date:  2015-11-05

9.  Proteomics Profiling Reveals Carbohydrate Metabolic Enzymes and 14-3-3 Proteins Play Important Roles for Starch Accumulation during Cassava Root Tuberization.

Authors:  Xuchu Wang; Lili Chang; Zheng Tong; Dongyang Wang; Qi Yin; Dan Wang; Xiang Jin; Qian Yang; Liming Wang; Yong Sun; Qixing Huang; Anping Guo; Ming Peng
Journal:  Sci Rep       Date:  2016-01-21       Impact factor: 4.379

10.  Effect of the epiphytic bacterium Bacillus sp. WPySW2 on the metabolism of Pyropia haitanensis.

Authors:  Yuqin Xiong; Rui Yang; Xiaoxiao Sun; Huatian Yang; Haimin Chen
Journal:  J Appl Phycol       Date:  2017-12-02       Impact factor: 3.215

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.