We describe the quantitative [2 + 2] photocycloaddition of crystalline trans-2,4-dichloro-6-styrylpyrimidine to produce the corresponding htt r-ctt cyclobutane dimer, and we present (1)H NMR analysis of the photolysis of this and six other mono-, di-, and triazastilbenes in solid and solution states. Density functional (M06-2X) and correlated ab initio (MP2) calculations were used to obtain interaction energies between two monomers of each azastilbene. These energies mirror the relative polarization of the stilbene moieties and can be quantitatively correlated with the rate of reaction and selective formation of the htt r-ctt dimers. In the solid state, poor correlation is observed between interaction energy and reactivity/selectivity. This lack of correlation is explained through X-ray analysis of the azastilbene monomers and is shown to be in accordance with the principles of Schmidt's topochemical postulate. Conversely, in solution there is a strong positive correlation (R(2) = 0.96) between interaction energies and formation of the htt r-ctt dimer. These results are the first to show this correlation and to demonstrate the utility of calculated interaction energies as a tool for the prediction of stereo- and regioselectivity in solution-state stilbene-type photocycloadditions.
We describe the quantitative [2 + 2] photocycloaddition ofcrystalline trans-2,4-dichloro-6-styrylpyrimidine to produce the corresponding httr-ctt cyclobutane dimer, and we present (1)H NMR analysis of the photolysis of this and six other mono-, di-, and triazastilbenes in solid and solution states. Density functional (M06-2X) and correlated ab initio (MP2) calculations were used to obtain interaction energies between two monomers of each azastilbene. These energies mirror the relative polarization of the stilbene moieties and can be quantitatively correlated with the rate of reaction and selective formation of the httr-ctt dimers. In the solid state, poor correlation is observed between interaction energy and reactivity/selectivity. This lack ofcorrelation is explained through X-ray analysis of the azastilbene monomers and is shown to be in accordance with the principles of Schmidt's topochemical postulate. Conversely, in solution there is a strong positive correlation (R(2) = 0.96) between interaction energies and formation of the httr-ctt dimer. These results are the first to show this correlation and to demonstrate the utility ofcalculated interaction energies as a tool for the prediction of stereo- and regioselectivity in solution-state stilbene-type photocycloadditions.
Although alkene photodimerization
in the solid state, which holds
the allure ofcontrolling both regio- and stereochemistry on the basis
of the crystal orientation of the reactants, has been known since
the beginning of organicchemistry,[1] it
has recently undergone a resurgence of interest due to applications
in organic materials chemistry. While isolated reports from more than
a century ago describe the regio- and stereoselectivity of this transformation,[2−7] it was not until the 1960s that Schmidt articulated the “topochemical
postulate”,[8] which attempts to predict
which alkenes readily undergo [2 + 2] photocycloaddition on the basis
of the crystal packing of the starting alkenes.[9−11] Schmidt noted
two essential criteria for dimerization to occur: the double bonds
ofcrystalline reactants must be parallel to each other, and the center-to-center
distance of the reacting alkenes must be less than 4.2 Å apart.
When these criteria are satisfied, photocycloaddition was predicted
to proceed under “topochemical” control, producing selectively
the regio- and stereoisomer dictated by the molecular packing of the
alkenes in the crystal.While Schmidt’s principles successfully
rationalized topochemical
control in the solid-state photodimerization ofcinnamic acids and
many other disubstituted olefins, a range of exceptions to these rules
developed, including crystalline olefins that failed to react as expected
and crystals that underwent dimerization despite a lack of double-bond
planarity or greatly increased separation of the reacting atoms. The
“reaction cavity” concept, in which the inter- and intramolecular
motion of the reactive pair is constrained by its crystal lattice,
was proposed by Cohen,[12] and this concept,
together with crystal lattice energy calculations, effectively explained
both positive and negative exceptions. For close-stacking, parallel-oriented
disubstituted olefins with a <4.2 Å center-to-center distance
that failed to react in the solid state, the lattice perturbation
needed to accommodate the photodimerization product would have required
an enormous input of energy (i.e., thousands of kcal/mol).[13] Conversely, for alkenes that undergo dimerization
yet had crystal packing predicted to be unreactive, calculations showed
surprisingly little disturbance in their molecular environment despite
the movement required for cyclobutaneformation with minimal increase
in lattice energy.[14−16] Thus, while Schmidt’s original topochemical
postulate continues to be a good rule of thumb, additional exceptions
that will doubtless arise will require a more in-depth analysis than
a cursory examination of the X-ray crystal structure of the starting
material. For excellent reviews, see Natarajan and Ramamurthy.[17,18]While the photochemistry ofstilbenes and its derivatives
has been
well studied,[17,19−24] there have been relatively few reports on the photolysis ofstilbene
derivatives with nitrogen-bearing rings. Nonetheless, the [2 + 2]
photocycloaddition of2- and 4-azastilbene derivatives has been studied
extensively in both the solid and solution state. In solution, styrylpyridines,
both as free bases and as various pyridinium salts, produce low yields
of dimers upon irradiation, with the ioniccompounds generally giving
higher cyclobutane yields and increased stereo- and regioselectivity.[25−28] With 4-styrylpyridines, salt formation accelerated solution-state
[2 + 2] photocycloaddition,[29] with increasing
addition of acid giving more rapid and more selective dimer formation.
In addition, when the highly polarized 4-(4′-methoxystyryl)pyridine
was irradiated, an overall yield of 95% was obtained, with 64% being
a single cyclobutane isomer, whereas irradiation of the analogous
trifluoromethyl azastilbene 4-(4′-trifluoromethylstyryl)pyridine
produced the major cyclobutane isomer in only 24% yield. On the basis
of the effect ofalkene polarization, it was argued that cation−π
interactions are responsible for the increased yield and selectivity
observed with solution-state irradiations ofstyrylpyridinium salts
vs their uncharged counterparts.Photolysis reactions in the
solid state produce results markedly
different from those in solution, with the styrylpyridinefree bases
forming only very low yields ofcyclobutanes (<5%) and percent
conversion to the dimer from the pyridinium salt varying greatly depending
on the alkyl group and counterion used.[27,28] While X-ray
crystal structures were not obtained for the majority of these azastilbenes,
the significant effect ofcounteranions on the dimerization yield
suggests that changes in molecular packing might be at play and thus
might be explained by the topochemical postulate. This presumption
was reinforced by results with 1,2-bis(4-pyridyl)ethylenes and 1,2-bis(2-pyrazinyl)ethylenes,
which demonstrated an inverse correlation between the distance separating
the double bonds and the rate of dimerization,[30] and more recently by the solid-state photolysis of a wide
array of4-stilbazole HCl salts.[31]While there are a few other examples ofazastilbene solid-state
photochemical reactions, a thorough literature search of the photodimerization
ofstyrylpyrimidines revealed only three examples,[32−35] one of which appears to be an
accidental dimerization that occurred during a recrystallization.[34] The most pertinent of these reports compares
the irradiation products from three different styrylpyrimidines, with
the pyrimidine rings in various oxidation states, as well as those
of various other heteroaromaticstilbenes.[33] Only in systems highly polarized by electron-withdrawing heteroaromatics
were cyclobutanes produced in good yields and high selectivity, leading
the authors to conclude that the polarity of the stilbene-type systems
governs photoreactivity by directly influencing crystal packing.In this study, we determine the yield and regio- and stereoselectivity
of the photodimerization of a variety ofmono-, di-, and triazastilbenes
in both the solid state and solution. Density functional theory and
ab initio correlated calculations have been performed on each of the
azastilbenes in order to determine dimer interaction energies, and
these energies are correlated to the photochemical outcomes. While
strong correlation exists between interaction energies and solution
reaction rate and selectivity, photodimerization in the solid state
is rationalized by consideration of the topochemical postulate and
the concept of reaction cavity, as supported by X-ray crystal structure
analysis of the photoreactive monomers.
Results
Our interest
in topochemically controlled reactions was triggered
by the accidental discovery of the light-initiated dimerization oftrans-2,4-dichloro-6-styrylpyrimidine (1) to
form cyclobutane 2, which occurred in the solid state
over the course of approximately 1 month in a round-bottom flask on
the benchtop under ambient lighting and temperature (Scheme 1). Intrigued by the facile nature and complete stereocontrol
exhibited by this reaction, we attempted to replicate the photocycloaddition
under more controlled conditions. Irradiation of 1 g ofstyrylpyrimidine 1 layered between two sheets ofborosilicate glass with a
water-cooled 450 W Hanovia medium-pressure mercury arc lamp gave complete
conversion of the starting material in approximately 1.5 h, with similar
retention of stereo- and regioselectivity. Milder light sources—a
Rayonet reactor equipped with 8 W ultraviolet bulbs or a 250 W infrared
sun lamp used in a light-reflective box—also efficiently converted 1 to 2, with the sun lamp providing quantitative
conversion of 50 mg of 1 to the cyclobutane in less than
40 min.
Scheme 1
Unanticipated Synthesis of Tetraaryl Cyclobutane 2
Solution-state photolysis was
also performed on 1 with
varying degrees of success. A 5 mg/mL solution of 1 in
three different solvents, benzene, acetonitrile, and methanol, was
irradiated in a photochemical reaction vessel with a water-cooled
450 W Hanovia medium-pressure mercury arc lamp for 4–5 h. The
results of these trials, as measured by 1H NMR of the crude
reaction mixture, are shown in Table 1. This
analysis is based on the integration and comparison of the vinyl and
cyclobutyl protons of the various isomers formed during photolysis,
each of which generally produces at least one unique signal that is
adequately separated from those of the other isomers.
Table 1
Solid- and Solution-State Irradiation
Products (%) of 2,4-Dichloro-6-styrylpyrimidine (1) Presented
in Mass Percent of the Crude Product Mixture As Determined by Analysis
of the Alkene/Cyclobutane Proton Peaks in 1H NMR
diazastilbene
head-to-tail
cyclobutane isomers
head-to-head
cyclobutane isomers
solvent
trans
cis
r-ctt
r-cct
r-ctc
r-tct
r-ccc
r-ctt
r-tcc
r-ctc
r-tct
r-ccc
red/add
solid state
0
0
100
0
0
0
0
0
0
0
0
0
0
Ph-H
36
52
7
1
0
1
0
1
0
0
1
0
0
ACN
38
45
8
3
0
3
0
2
0
0
2
0
0
MeOH
24
48
3
2
0
2
0
2
0
0
2
0
23
Figure 1 shows the
five possible head-to-tail
(htt) stereoisomers and eight possible head-to-head (hth) stereoisomers
(including three pairs of enantiomers) that can be formed from the
irradiation of 1. Labeling of the isomers in both Table 1 and Figure 1 is according
to IUPACconvention,[36] where r refers to the reference carbon (labeled with a small ‘1’
in Figure 1) and c or t refers to the stereochemistry (cis or trans, respectively)
of the group on subsequently numbered carbon atoms in relation to
the substituent on the reference carbon. The analysis of the spectrum
of each cyclobutane isomer, which is necessary for this type of examination,
is described below and is given more extensively in the Supporting Information.
Figure 1
Thirteen regio- and stereoisomers
that can hypothetically arise
from the irradiation of 1. The reference (r) carbon is denoted by the small “1”.
Thirteen regio- and stereoisomers
that can hypothetically arise
from the irradiation of 1. The reference (r) carbon is denoted by the small “1”.The results of the solution-state irradiations
differ markedly
from those obtained from the solid-state examples above. Despite prolonged
irradiation times, photolysis in benzene or acetonitrile gives mostly
trans/cis isomerization, with cis-2,4-dichloro-6-styrylpyrimidine
(-1) as the major product
(52% and 45%, respectively). In both solvents, cyclobutane dimers
are minor products (12% in benzene and 17% in acetonitrile), and while
there is some selectivity for the httr-ctt isomer 2 relative to the other cyclobutanesformed (65% and 45% for
benzene and acetonitrile, respectively), this fails to approach the
essentially exclusive formation of 2 obtained from the
lower-power solid-state irradiations. Irradiation in methanol provides
similar results, with the additional appearance of large amounts ofalkene reduction and solvent addition products, a conversion known
from irradiation of other azastilbenes in protic solvents.[37] Nevertheless, dimer formation remains comparable
at 15%, and while the httr-ctt isomer 2 is still the dominant cyclobutane, it represents only 28% of the
total cyclobutanes.
Isolation and Elucidation of the Photoproducts
of trans-2,4-Dichloro-6-styrylpyrimidine
To isolate adequate quantities
of the minor cyclobutane isomers for full characterization, we combined
chromatographicfractions from the above solution-state irradiations.
Solid-state irradiation (4 h, medium-pressure mercury lamp) of the cis-2,4-dichloro-6-styrylpyrimidine isolated from the solution-state
irradiations also helped provide additional cyclobutane products containing
appreciable quantities of the minor cyclobutane dimers. Extensive
chromatographic separations of these products eventually produced
pure or nearly pure samples of 8 of the 10 theoretical diastereomers
and enantiomeric pairs (compounds 2–5 and 7–10).To confirm its
regio and stereochemistry, a crystal structure of the initial httr-ctt cyclobutane 2 was obtained (see Figure
S1 in the Supporting Information). Nuclear
Overhauser effect (NOE) spectra of 2 allowed us to make 1H NMR assignments of the cyclobutyl protons. The percent NOEsfor each cyclobutyl proton of 2 along with the corresponding
parent 1H NMR spectrum are shown in Figure 2. With the regio- and stereochemistry of dimer 2 firmly established, NOE analysis became the basis for structural
determination and 1H NMR peak assignment of the other cyclobutanes.
This approach permitted confident identification offive of the seven
remaining isolated isomers, with some ambiguity associated with differentiation
between the two remaining cyclobutanes (compounds 8 and 9). The rationale behind the assignment of each 1H NMR spectral/compound pair is described in detail in the Supporting Information. These assignments are
used throughout the remainder of the paper.
Figure 2
1H NMR (500
MHz, CDCl3) spectra and percent
NOEs for the htt r-ctt dimer 2. The
irradiated protons for each structure are circled and the percent
NOEs based on this proton are indicated.
1H NMR (500
MHz, CDCl3) spectra and percent
NOEsfor the httr-ctt dimer 2. The
irradiated protons for each structure are circled and the percent
NOEs based on this proton are indicated.
Synthesis and Solid-State Irradiation of Azastilbene Derivatives
of Styrylpyrimidine 1
We next explored how varying
the electron-withdrawing and -donating nature of the two aromatic
rings affected the rate of solid-state photocycloaddition of these
compounds. On the basis of earlier precedent for styrylpyridines and
styrylpyrimidines,[29,33] we hypothesized that more polarized
compounds would interact with increasing strength through head-to-tail
π stacking, producing tightly packed crystals that are readily
photoreactive. Conversely, we expected that less polarized compounds
would either fail to undergo photocycloaddion or react only slowly,
with an accompanying loss of stereo- and regioselectivity. To test
this hypothesis, we prepared a set offive additional azastilbenes
bearing electron-withdrawing (chlorine), electron-donating (methoxy),
or electron-neutral (hydrogen) substituents on the pyrimidine or pyridine
rings. The phenyl substituent was also replaced in two of the derivatives
by a methoxyphenyl or pyridine moiety.The synthesis of the
azastilbenes was straightforward and in each case proceeded in only
a single step from readily available starting materials (Scheme 2). trans-2,4-dimethoxy-6-styrylpyrimidine
(12) is formed by the SNAr reaction of 1 in a 25% solution ofNaOMe in methanol, heated to reflux
overnight. trans-6-Styrylpyrimidine (13) and trans-2,4-dichloro-6-styrylpyridine (14) are synthesized by simple Suzuki–Miyaura cross-couplings
from trans-styrylboronic acid and the corresponding
heteroaryl chlorides. Finally, the triazastilbene 15 and
4-methoxystyrylpyrimidine 16 are produced from the base-catalyzed
condensation of2,4-dichloro-6-methylpyrimidine with the appropriate
aryl aldehydes.
Scheme 2
Synthesis of Azastilbene Derivatives
To adequately probe the relationship between
π system polarization
and topochemically controlled reactivity, we prepared an irradiation
facility that provided uniform light intensity and temperature. Due
to the relatively low melting point of some of the diazastilbenes,
it was especially important to ensure even cooling of the reaction
sample. Thus, a water-cooled borosilicate glass plate was created,
upon which the ground, recrystallized sample was spread and then covered
with a second borosilicate glass plate. To aid in cooling the reaction
mixture, we selected a “cool” light source of intensity
comparable to that of the 250 W sun lamp commonly used in irradiations:
a 68 W compact fluorescent light (300 W incandescent equivalent, 2700
K color temperature). This source converted 50 mg of 1 into 2 in less than 30 min.[38,39] When the reaction is performed in an aluminumfoil-encased enclosure,
this simple setup allows for an approximately room temperature irradiation
in which the air temperature does not exceed 30 °C and the surface
of the water-cooled plate has a constant temperature of 23–25
°C.Using this setup, we performed irradiations on 45–50
mg
of recrystallized material for each of the six trans-azastilbenes (1, 12–16), as well as on cis-2,4-dichloro-6-styrylpyrimidine
(-1), with time points
taken at 10 min intervals for the first 2 h and at 0.5–1 h
intervals thereafter. Each sample was analyzed by 1H NMR,
and in most cases, the eight expected cyclobutane isomers could be
differentiated, on the basis of the 1H NMR assignments
made previously for the various isomers ofcompound 2. An example of peak assignments for the crude irradiation spectrum
ofcompound 13, showcasing the ability to distinguish
between photoproducts using 1H NMR, is shown in Figure 3 (spectra for other irradiations are available in
the Supporting Information). For each photolysis,
the percent composition of every component in the reaction mixture
was determined from the peaks arising from the vinylic protons of
the starting material (cis- and trans-vinylic as well as cyclobutyl peaks). These values were then plotted
vs time, and an exponential least-squares curve was fitted to each
data set (see Figure 4 for photolysis curves
of 1 and 15 and the Supporting Information for the irradiation plots of the remaining
compounds).
Figure 3
1H NMR (500 MHz, CDCl3) of the crude reaction
mixture for the solid-state irradiation of 13 at 24 h.
Figure 4
Photolysis time courses with fitted exponential
curves for (a) trans-2,4-dichloro-6-styrylpyrimidine
(1) and
(b) trans-2,4-dichloro-6-(2-(pyridin-2-yl)vinyl)pyrimidine
(15).
1H NMR (500 MHz, CDCl3) of the crude reaction
mixture for the solid-state irradiation of 13 at 24 h.Photolysis time courses with fitted exponential
curves for (a) trans-2,4-dichloro-6-styrylpyrimidine
(1) and
(b) trans-2,4-dichloro-6-(2-(pyridin-2-yl)vinyl)pyrimidine
(15).The half-lives (t1/2) for the formation
of each component in the final photolysis mixture, along with the
associated values for all combined cyclobutane isomers, are shown
in Table 2. Table 3 gives
the percent composition of each component of the reaction mixtures
at the final time point for each photolysis. A study of these tables
reveals somewhat contradictory trends. On the basis of our initial
hypothesis, we expected those systems that are adequately polarized
(i.e., having one electron-withdrawing and one electron-donating ring)
would provide the httr-ctt isomer preferentially.
Additionally, we expected that the more polarized the azastilbene,
the more rapid the reaction (smaller t1/2). While the dichlorostryrylpyridine 14 reacted exclusively
to form the httr-ctt isomer with a satisfactory
rate (t1/2 ca. 4 times that for the similar
reaction of 1), it was unique among the set of derivatives.
Even the highly polarized 4′-methoxystyrylpyrimidine 16 failed to selectively produce the httr-ctt isomer (ca. 39% conversion, t1/2 ca.
33 times that of 1) and instead formed the hth r-cttcompound as the major product. Surprisingly, the photolysis
of the significantly less polarized triazastilbene 15 proceeded 4 times as quickly as that of 16, although
it did favor formation of the hth dimer more strongly (81.3 vs 18.7%
for the hth and httr-ctt dimers, respectively).
Table 2
t1/2 Values
for the Photoproducts of the Solid-State Irradiation of Azastilbenes 1 and 12–16
t1/2 of formation
(min)a
htt
hth
azastilbene
cisb
comb CBsc
r-ctt
r-tct
r-ctt
r-tct
1
9.8
9.8
12
14 200
28800
28400
13
498
1994
6730
>105
3850
19700
14
39.1
39.1
15
45.4
160
34.2
16
201
331
243
cis-1d
N/A
213
213
Isomers not reported in the table
were not observed upon photolysis.
Respective cis-azastilbene.
t1/2 calculated from
curve formed by total percent composition of all
cyclobutanes in the reaction mixture.
cis-2,4-Dichloro-6-styrylpyrimidine.
Table 3
Percent Composition
of the Photoproducts
of the Solid-State Irradiation of Azastilbenes 1 and 12–16
composition
at end of irradiation (%)a
htt
hth
azastilbene
time (min)
trans
cisb
comb CBsc
r-ctt
r-tct
r-ctt
r-tct
1
40
0
0
100
100
0
0
0
12
1440
90.5
0
9.5
4.7
0
4.8
0
13
1440
55.9
6.5
37.5
15.4
5.8
10.4
6.0
14
180
0
0
100
100
0
0
0
15
300
0
0
100
18.7
0
81.3
0
16
540
4.0
0
96.0
38.7
0
57.3
0
cis-1d
420
0
0
100
100
0
0
0
Isomers not reported in the table
were not observed upon photolysis.
Respective cis-azastilbene.
Percent composition of all cyclobutanes
in the reaction mixture.
cis-2,4-Dichloro-6-styrylpyrimidine.
Isomers not reported in the table
were not observed upon photolysis.Respective cis-azastilbene.t1/2 calculated from
curve formed by total percent composition of all
cyclobutanes in the reaction mixture.cis-2,4-Dichloro-6-styrylpyrimidine.Isomers not reported in the table
were not observed upon photolysis.Respective cis-azastilbene.Percent composition of all cyclobutanes
in the reaction mixture.cis-2,4-Dichloro-6-styrylpyrimidine.In contrast to the solid-state irradiations
with the highly polarized
stilbene systems, the azastilbenes designed to have reduced polarity
across the conjugated π system (12 and 13) reacted as expected, with very little conversion to the httr-ctt dimer, even with extended irradiation times. The dimethoxy-substituted
compound 12 was especially inert to photolysis, forming
the httr-ctt dimer in only 4.7% yield after 24 h.
As with the initial irradiation of 1, essentially no
cis/trans isomerization took place in the crystalline material. Only
photolysis of 13 produced a small amount of the cis-styrylpyrimidine (6.5%) after 24 h.
Molecular Modeling
of Azastilbene Interactions
While
chemical intuition allows for ordering of the azastilbenes on the
basis of polarity across the π system (16 > 1 > 14 > 15 > 13 > 12), π stacking is an effect mediated by
electronic
effects more subtle than simply oppositely paired electrostaticcharge.[40,41] Consequently, it is more difficult to predict how increasing the
electron-withdrawing and/or -donating nature of the aryl rings would
affect the π stacking of the azastilbenes. To provide a more
quantitative understanding of this stabilization of the azastilbenes,
M06-2X density functional and correlated ab initio MP2 calculations
were performed. All geometries were optimized with the M06-2X functional
and 6-31G(d,p) basis set in Gaussian 09[42] using an ultrafine integration grid[43] in the gas phase. Monomers and π-stacking “dimers”
were oriented in either a head-to-tail or head-to-head manner, with
the crystal structures described below acting as the starting point
for the dimer geometry optimizations. All stationary points were verified
as minima by vibrational normal mode inspection. Energies reported
are M06-2X/6-311+G(2d,p)//M06-2X/6-31G(d,p). Interaction energies
reported are relative to separated monomers and are corrected for
basis-set superposition error. Spin component scaled MP2 (SCS-MP2)
energies were computed by scaling the αβ and αα/ββ
MP2 correlation energies by 1/3 and 6/5, respectively.[44]The
M06-2X and SCS-MP2 interaction energies for the azastilbene dimers
are given in Table 4 and differ by an average
of only 0.8 kcal/mol. The trends and relative changes in binding energy
across the two methods are nearly identical.
Table 4
Azastilbene
Interaction Energies
interaction
energy (kcal/mol)
azastilbene
M062X
SCS-MP2
1
–15.8
–17.0
12
–6.4
–6.3
13
–11.8
–12.4
14
–14.8
–15.9
15
–14.2
–15.2
16
–17.8
–18.9
Figure 5 shows a plot of the t1/2 values ofhttr-ctt dimer formation
versus the SCS-MP2 interaction energies of the six azastilbenes. On
the basis of the presumption that compounds which exhibit a larger
binding energy should pack more tightly in the head-to-tail configuration,
one would expect that azastilbenes that release more energy upon interaction
would produce the httr-ctt cyclobutane
more rapidly in greater yield. While this holds true for compounds 1 and 12–14, monomers 15 and 16 do not react as expected in the solid
state (Figure 5b,c). Due to the large interaction
energy ofazastilbene 16 (−18.8 kcal/mol), we
anticipated that the reaction rate and yield for the htt dimer would
be comparable to or higher than that ofcompound 1 (interaction
energy −17.0 kcal/mol). Nonetheless, the opposite is true:
the solid-state photolysis of 16 forms the httr-ctt dimer at a rate 300 times slower than that of 1 and provides the httr-ctt dimer in only
39% yield, whereas 1 undergoes quantitative conversion
to 2. Furthermore, on the basis of the close binding
energies exhibited by 14 and 15, one would
expect these two to have similar t1/2 values
for the formation of the httr-ctt dimers. As with 16, compound 15 fails to perform as anticipated
and reacts to form the htt dimer at a rate 6 times slower than does 14. More striking is the lack of regioselectivity observed
in the irradiation of 15, which produces the htt dimer
in only 19% yield, while 14 is quantitatively converted
to the httr-ctt cyclobutane.
Figure 5
Correlation between SCS-MP2
interaction energies and the formation
of cyclobutanes under solid-state irradiation conditions: (a) t1/2 vs interaction energy; (b) enlargement of
the plot showing t1/2 vs interaction energy
with only the first four points shown; (c) percent composition of
cyclobutanes at final irradiation time vs interaction energy.
Correlation between SCS-MP2
interaction energies and the formation
ofcyclobutanes under solid-state irradiation conditions: (a) t1/2 vs interaction energy; (b) enlargement of
the plot showing t1/2 vs interaction energy
with only the first four points shown; (c) percent composition ofcyclobutanes at final irradiation time vs interaction energy.In addition to binding energies,
electrostatic potentials were
calculated for each monomer and head-to-tail π-stacking pair,
and these are projected on an isodensity surface in Figure 6 (blue, +0.02 hartree; red, −0.02 hartree).
Unfortunately, visual inspection of these surfaces fails to provide
significant insight into which systems are more polarized; while a
difference in electrostatic potential obviously exists across the
aromatic rings of each compound, from the ESPs it is impossible to
grade this level of polarity. More visually satisfying is the increase
of polarity observed across monomers as they interact in the htt dimer
formation (bottom row ofFigure 6). This change
in electrostatic potential is anticipated as the π systems begin
to feed into one another, accentuating the charge differential across
the azastilbene.
Figure 6
Electrostatic potential surfaces of azastilbenes (middle
row) and
their head-to-tail interacting dimers (bottom row).
Electrostatic potential surfaces ofazastilbenes (middle
row) and
their head-to-tail interacting dimers (bottom row).
Crystal Analysis and Photoreactivity of trans-Azastilbenes
To understand the disconnect
between the binding
energies and reactivity ofcompounds 15 and 16, single-crystal X-ray structures of the azastilbene monomers 1 and 16 were obtained and compared. As anticipated
from both the experimental results and computation work, 2,4-dichloro-6-styrylpyrimidine
(1) packs in an array of infinite columns in a head-to-tail
manner (Figure 7). There are two unique columns
contained in each unit cell; these alternate with distances between
the monomers being either 3.543 or 3.775 Å. The short distance
and planarity between the alkene double bonds suggest that the [2
+ 2] photocycloaddition between monomers of 1 should
proceed under topochemical control, and this is indeed the case (as
described above).
Figure 7
X-ray crystal structure of trans-2,4-dichloro-6-styrylpyrimidine
(1).
X-ray crystal structure oftrans-2,4-dichloro-6-styrylpyrimidine
(1).The X-ray crystal structure
ofazastilbene 16 is more
intriguing. On the basis of the push–pull nature of the aromatic
rings and the large interaction energy exhibited by the head-to-tail
dimer of 16, we expected crystal packing to mimic that
of 1. Nevertheless, the 4′-methoxyazastilbene
packs in a head-to-head array with multiple infinite columns contributing
to the unit cell (Figure 8). The crystal analysis
of 16 displays only a single interalkene distance of
4.164 Å. This places the reacting double bonds at the limits
of the distance in which the topochemical principles are considered
to operate (4.2 Å). Nonetheless, with the crystal structure of 16 in hand, the regio- and stereochemistry observed upon its
solid-state irradiation can readily be explained. Indeed, it appears
that photolysis of 16 also proceeds under quasi-topochemical
control, producing the hth r-ctt dimer preferentially
(57.3% conversion).
Figure 8
X-ray crystal structure of trans-2,4-dichloro-6-(4-methoxystyryl)pyrimidine
(16).
Crystal Structure of cis-2,4-Dichloro-6-styrylpyrimidine
As shown in
Tables 2 and 3, the
solid-state irradiation ofcis-2,4-dichloro-6-styrylpyrimidine
(cis-1) produces 2 in yields equivalent
to that from the irradiation oftrans-2,4-dichloro-6-styrylpyrimidine
(1), albeit at a significantly decreased rate (t1/2 of 213 min vs 9.8 min for the trans isomer).
There are two possible routes for formation of the httr-ctt dimer from the crystalline cis-azastilbene. cis-1 might crystallize in such a manner that the reacting
double bonds are parallel to each other, with the aryl rings of each
alternating monomer oriented away from one another; if the [2 + 2]
photocycloaddition then proceeded under topochemical control, cyclobutane 2 would be formed selectively (top pathway of Scheme 3). Alternatively, crystalline cis-1 might first undergo light-initiated cis/trans isomerization to 1, which then reorients to form microcrystals that give rise
to 2 (bottom pathway of Scheme 3).
Scheme 3
Formation of Cyclobutane 2 from cis-2,4-Dichloro-6-styrylpyrimidine
To differentiate between these two pathways, we obtained
an X-ray
crystal structure of the cis starting
material. As shown in Figure 9, the unit cell
ofcis-1 also contains multiple infinite columns which
are packed in such a manner that the alkenyl double bonds are parallel
to one another. Nonetheless, if the stereochemistry of the photoproducts
was determined by the solid-state molecular packing, one would expect
the hth r-ccc isomer to be produced, not the httr-ctt cyclobutane. Additionally, measurement of the
space between the reacting double bonds in the cis-1 crystal
shows that they are separated by 5.131 Å, too large for cycloaddition
without significant perturbation of the crystal lattice. Thus, formation
of 2 from -1 cannot be proceeding under topochemical control; therefore, the
alternate pathway must be considered.
Figure 9
X-ray crystal structure of cis-2,4-dichloro-6-styrylpyrimidine.
X-ray crystal structure ofcis-2,4-dichloro-6-styrylpyrimidine.Additional evidence for cis/trans isomerization in the solid-state
photolysis of -1 is
apparent in the presence of trans isomer 1 in the reaction
mixture after as little as 20 min of irradiation (see Figure S18e, Supporting Information). The amount of 1 remains at a fairly constant level (3–10%) throughout
the irradiation but disappears near the completion of the reaction.
The absence ofcrystal packing suitable for formation of the httr-ctt cyclobutane, and the confirmed presence of 1 in in the reaction mixture, strongly suggest that the conversion
ofcis-1 to 2 proceeds through the trans-azastilbene
intermediate. While visual inspection throughout the water-cooled
irradiation ofcis-1 shows no observable solid-to-liquid transformation,
it is possible that the initial cis/trans isomerization is expedited
by microscopic melting, facilitated by the relatively low melting
point ofcis-1 (47–48 °C).
Solution-State Irradiation of Azastilbene
Derivatives
From the X-ray crystal structure of 16, it became clear
that the stereo- and regiochemistry observed upon irradiation of this
compound were due to its molecular packing in the solid state. This
packing overcame the inherent polarity and associated energetic preference
for head-to-tail interaction demonstrated in the gas-phase calculations
of the 4′-methoxyazastilbene (similar considerations likely
apply to the triazastilbene 15). We wanted to investigate
whether this bias toward head-to-head photoproducts for 15 and 16 could be reversed by irradiation in solution,
which would eliminate the constraints enforced by the structured crystal
lattice. To this end, 40 mM solutions of each azastilbene in CDCl3 were prepared and subsequently irradiated in sealed borosilicate
NMR tubes. Photolysis was accomplished using the same arrangement
as described for the solid-state irradiations, and all of the azastilbene
samples were irradiated simultaneously so as to minimize variability.
The percent composition of each sample after 24 h of photolysis is
shown in Table 5 (see the Supporting Information for spectra of the solution-state irradiation
product mixtures).
Table 5
Percent Composition of Solution-State
Irradiation Mixture of Azastilbenes at 24 h
composition
(%)
htt
hth
azastilbene
transa
cisb
r-ctt
r-cct + r-ctc
r-tct
r-ccc
r-ctt
r-tcc + r-ctc
r-tct
r-ccc
peri-cyclic pdtc
comb CBsd
1
29.9
30.6
21.3
1.9
5.2
0.0
4.9
0.0
4.0
2.3
0.0
39.5
12
32.5
61.2
1.9
0.1
0.0
0.0
0.5
0.6
0.0
0.0
3.1
3.2
13
35.0
57.2
4.3
0.5
0.3
0.0
1.1
0.0
0.1
1.6
0.0
8.0
14
39.9
49.2
7.4
0.0
0.6
0.6
1.3
0.0
0.0
1.0
0.0
10.9
15e
65.5
22.9
0.0
0.0
3.5
0.0
2.3
0.0
4.3
1.5
0.0
11.6
16
27.3
14.0
46.3
1.7
5.0
0.0
4.6
0.0
1.1
0.0
0.0
58.7
Respective trans-azastilbene.
Respective cis-azastilbene.
Respective benzo[f]quinolone or benzo[f]quinazoline.
Percent composition of all cyclobutanes
in the reaction mixture.
Decomposition/precipitation of SM/pdt
upon irradiation.
Respective trans-azastilbene.Respective cis-azastilbene.Respective benzo[f]quinolone or benzo[f]quinazoline.Percent composition of all cyclobutanes
in the reaction mixture.Decomposition/precipitation of SM/pdt
upon irradiation.As expected,
the solution-state irradiations resulted predominantly
in trans/cis isomerization of the azastilbene rather than cycloaddition.
For all compounds except 15 and 16, the
cis monomer was the predominant component of the reaction mixture
at 24 h. Additionally, there was a loss of regio- and stereoselectivity
for most of the azastilbene samples. This was especially striking
for 1 and 14, which, in the solid state,
were quantitatively converted to the httr-ctt isomer.
While the httr-ctt isomer continues to be the major
cyclobutane product, the formation of multiple other isomers attests
to the role that topochemical control plays for these compounds in
the solid state. In addition to the httr-tct and
hth r-ctt and r-tct dimers observed
as products of the solid-state irradiations, the solution-state irradiations
also produced varying amounts of the previously identified httr-cct and r-ctc and hth r-tcc and r-ctc isomers. Because the 1H NMR
peaks of the hth r-cct and r-ctc isomers as well as the httr-cct and r-ctc isomers overlap, the percent compositions of these compounds in
Table 5 are combined. Intriguingly, in four
of the six samples a ninth cyclobutane dimer, the hth r-ccc isomer, was found. This assignment is based on the presence of two
distinct doublets located between δ 3.9 and 4.3 in the 1H NMR of the product mixture offour of the six azastilbenes
(in the photolysis of 13 these peaks presumably overlap
to form an apparent quartet at δ 4.04). The assignment of the
htt r-ccc isomer to these peaks is negated by the
splitting pattern (doublet vs triplet). The presence of multiple methoxy
peaks in the spectra of the product mixture from irradiation of 12 and 16 makes it impossible to confirm or deny
the presence of the hth r-ccc dimer. It should be
noted that irradiation oftriazastilbene 15 leads to
formation of insoluble photoproducts which preclude the accurate measurement
of the reaction components by NMR. Two additional products of note
include the possible formation of the htt r-ccc dimer
from 14 (on the basis of an otherwise unexplained singlet
at δ 4.01) and a benzo[f]quinazoline, formed
upon the irradiation of 12. Benzo[f]quinazoline
is a well-known irradiation product ofdiazastilbenes.[45−48]Regardless of the presence of multiple cyclobutane isomers
in the
solution-state irradiation mixtures, in every instance except for
compound 15, the predominant product was the httr-ctt isomer. The percent composition of the httr-ctt adducts as well as of the total combined cyclobutane
products from the azastilbene solution irradiations are displayed,
plotted against the SCS-MP2 binding energy calculated for each compound
in Figure 10 (compound 15 has
been excluded from this analysis based on the insolubility of its
photoproducts). In contrast to the solid-state photolysis, the solution
irradiations display a consistent relationship between the binding
energy of the azastilbenes and the yield of the httr-ctt dimer, and an exponential least-squares curve fitting provides a
coefficient of determination (R2 value)
of 0.96. A similar analysis of the percent composition of all the
combined cyclobutanes in each reaction mixture produces a somewhat
worse fit, with an R2 value of 0.83, reflecting
the expectation that the head-to-tail binding energy provides a better
predictive measure ofhttr-ctt dimer formation than
that ofcyclobutaneformation as a whole.
Figure 10
Correlation between
SCS-MP2 interaction energies and the formation
of cyclobutanes under solution-state irradiation at 24 h.
Correlation between
SCS-MP2 interaction energies and the formation
ofcyclobutanes under solution-state irradiation at 24 h.
Discussion
The range of solid-state
photochemical results we have presented
here is generally consistent with the conclusions made by Schmidt
and co-workers when they first presented their topochemical postulates.[8−11,49] Namely, the crystal structure
oftrans-2,4-dichloro-6-styrylpyrimidine (1) displays a molecular packing in which the double bonds undergoing
[2 + 2] photocycloaddition are parallel to one another and are separated
by less than 4.0 Å. As would be expected from this orientation,
the httr-ctt dimer 2 is formed in quantitative
yield in a short amount of time with even moderate-intensity light
sources (t1/2 of less than 10 min). When
azastilbenes of similar or increased polarity across the π system
were irradiated in the solid state, the results initially proved contradictory.
While the less polarized trans-2,4-dichloro-6-styrylpyridine
(14) also quantitatively produced the httr-ctt cyclobutane, albeit with a longer half-life than for the reaction
of 1, the similarly polar triazastilbene 15 and significantly more polarized 4′-methoxystyrylpyrimidine 16 preferentially produced the hth r-ctt dimer.X-ray structural analysis of 16 sheds light on these
results, as it shows a consistent head-to-head arrangement of infinite
columns ofazastilbene monomers with an interalkene distance just
under 4.2 Å. Further inspection of the crystal structure reveals
multiple weak hydrogen bonds stabilizing this arrangement. Most notable
of these are the intracolumnar methoxy C–H to O (2.613 Å)
and methoxy C–H to π (2.860 Å) interactions. There
are two additional intercolumnar weak hydrogen bonds: pyrimidinyl
C–H to N (2.719 Å) and phenyl C–H to O (2.67 Å).
Weak hydrogen bonding has been studied extensively through crystal
structure analysis as well as by computations (see the reviews by
Steiner and Desiraju).[50−52] The distances measured for the weak interactions
in the crystal structure of 16 (all <3 Å) suggest
structurally significant bonding, and while it is difficult to assign
energy values to any single interaction, other examples ofC–H
to O, C–H to π, and C–H to N bonds have been calculated
to range from ≤1 to >2 kcal/mol. Consequently, it is not
surprising
that these weak hydrogen bonds in aggregate are able to overcome the
energetically less favorable head-to-head π-stacking conformation
(15.1 vs 18.9 kcal/mol binding energy for the hth vs htt dimers).Although the topochemical postulate can be used to explain the
hth r-ctt isomer as the major photoproduct of solid-state 16 (57.3% conversion), it is more difficult to justify the
large amount of the httr-ctt isomer formed from
this reaction (38.7%). Two main explanations for the loss of topochemical
control have been presented in the literature.[8,30] Both
argue that nontopochemical isomers are produced at defects in the
crystal. In one view these defects are present in the crystal at the
beginning of irradiation and are continually propagated as the nontopochemical
isomer forms. The other argument concludes that formation of topochemical
dimers causes local disruption in the crystal lattice. This eventually
produces defects in which a new crystal phase is formed during the
photolysis, from which the nontopochemical isomer arises. The presence
of the htt isomer upon irradiation of 16 could be justified
according to either of these posits.Extension of this reasoning
to compounds 14 and 15 suggests that photoproduct
formation proceeds from the
head-to-tail and head-to-head crystal forms, respectively. Although
the absence of a methoxy group on 14 and 15 negate the possibility of the intracolumnar C–H to O and
methoxy C–H to π bonds pertinent to 16,
the unique presence of a pyridine in these compounds may predispose
to stronger C–H to N hydrogen bonds, leading to unanticipated
packing orientations and the observed irradiation results.As
described here, we have attempted to correlate the polarity
of interacting π systems with their photoreactivity in the solid
state. To better gauge the effect of different aryl substituents on
polarization of the azastilbenes, DFT and MP2 calculations were performed
in both the monomer and “dimer” states. These calculations
provided interaction or binding energies which could then be correlated
to the azastilbene photoreactivity. Gratifyingly, the trends in binding
energy mimicked those that would have been predicted from an intuitive
analysis of the stilbenes, on the basis of generally accepted electron-withdrawing
and electron-donating properties of the aryl rings. More importantly,
these calculations provide quantitative values that can be compared
to the rates and percent compositions obtained from the various photolysis
reactions.We hypothesized that compounds exhibiting greater
interaction energies
(i.e., had more polarized π systems) would have crystal packing
in which the monomers were more closely oriented in a head-to-tail
manner. As a consequence of this presumed tight head-to-tail packing,
we anticipated that the rate offormation of and the selectivity for
the httr-ctt dimers would be greater for those proceeding
from a more polar starting material. This hypothesis, however, failed
to predict the outcomes of the solid-state irradiation of six azastilbenes.
While these results can be rationalized from the crystal structures
of the starting materials, the unexpected crystal packing of 15 and 16 highlights the unpredictability associated
with rational crystal engineering and the limits that this unpredictability
places on the use of solid-state photochemistry to produce synthetically
useful products with good control over stereo- and regioselectivity.
Indeed, there has been great interest in this field recently, and
significant advances have been made in the use of intermolecular templating
agents to increase photoreactivity and selectivity in the solid state.[53] These include the use ofhydrogen-bonding, metal–lone
pair interactions, halogen-bonding, and encapsulation approaches.[54,55] There has been less work in the direct design of molecules that
in and of themselves pack in a specific and reactive manner. While
examples exist ofhydrogen-bonding-enforced diastereoselective solid-state
photochemical reactions,[56] the majority
of these examples have focused on engineering a push–pull system
in which one arene ring of the diarylethylene system preferentially
interacts with the oppositely polarized ring or alkene.[21,22,57,58] Undoubtedly, this “neat” approach to crystal engineering
involving designed hydrogen-bonding or π–π interactions,
in which no secondary organizing agent is required, is more efficient.
Unfortunately, as described here, efforts to design crystals in this
manner can be frustratingly unfruitful, and it may prove that templating
techniques are more versatile in their application and hence more
useful.[59] For recent overviews ofcrystal
engineering and [2 + 2] photocycloadditions see the reviews by Natarajan,
Biradha, and Elacqua.[18,54,55]To our knowledge, this is the first attempt to correlate photoreactivity
in the solid state with calculated π system to π system
interaction energies. Similar comparisons of irradiation results and
the polarity of extended π systems have been made, but only
in a generalized fashion.[24,33,60] Our work in this area was only partially successful, largely due
to the unexpected crystal packing of 15 and 16. If these compounds are excluded from the analysis shown in Figure 5, the hypothesized relationship between binding
energy and the percent composition of the httr-ctt dimer in the reaction mixture and the inverse relationship between
interaction energy and t1/2 become apparent.
Indeed, as molecular orientation inside the crystal controls the outcome
of irradiation for crystalline solids and prediction ofcrystal packing
remains an unmastered problem, it seems unlikely that the stereoselective
synthesis ofcyclobutane derivatives through this approach will remain
little more than a hit-and-miss situation for the foreseeable future.Unlike the solid-state irradiations, the solution reactions show
a consistent exponential relationship between the percent composition
of the httr-ctt dimer in the photolysis mixture
and binding energy of the azastilbenes (Figure 10). Of special note is the observation that the cyclobutaneformed
preferentially from azastilbene 16, which has the highest
calculated htt interaction energy of the six irradiated compounds,
switches from the hth r-ctt dimer formed in the solid
state to the anticipated httr-ctt dimer in solution.
The excellent correlation observed for selective solution-state formation
of the httr-ctt dimer and binding energy suggests
that designing stilbene-type compounds that exhibit sufficiently large
computational binding energies may be a generally applicable method
for attaining solution [2 + 2] photocycloadditions that proceed in
synthetically useful regio- and stereochemical yields. Further experimental
work would do much to confirm the generality of solution reactivity
on the basis of interaction energies.
Conclusion
Here,
we reported the discovery of a solid-state topochemically
controlled [2 + 2] photocycloaddition between two molecules oftrans-2,4-dichloro-6-styrylpyrimidine (1) to
form in quantitative yield the associated httr-ctt cyclobutane dimer. Through solution irradiations, 8 of the 10 possible
cyclobutane isomers formed from the dimerization of 1 were isolated and identified. The spectral assignments from this
analysis were applied to the solid- and solution-state photochemical
reactions of 1 and five other azastilbene derivatives
(compounds 12–16) that contained
varying degrees of polarization across their extended π systems.
Interaction energies between two azastilbene monomers were calculated
for each compound using DFT and correlated ab initio calculations.
While it proved difficult to predict the preferential formation of
the httr-ctt dimer in the solid state on the basis
of these calculations, due to unpredictable crystal packing of two
of the azastilbenes (15 and 16), there was
a strong correlation between binding energies and httr-ctt cyclobutaneformation for all starting materials in solution. It
is proposed that the calculation of interaction energies may be a
good general tool for the prediction of successful stereo- and regioselective
photocycloaddition in solution for stilbene-type compounds.
Experimental Section
General Synthetic Methods
All reagents were used as
purchased. THF, ether, CH2Cl2, and DMF used
in reactions were dried using a solvent delivery system (neutral alumina
column).[61] All reactions were run under
a dry N2 atmosphere except where noted. Flash column chromatography[62] was performed on flash silica gel (40–64
μM, 60 Å) or using an MPLC system equipped with silica
gel columns. 1H NMR, 13C NMR, and NOE spectra
were obtained on 500 MHz FT-NMR spectrometers. Except where noted,
both low- and high-resolution mass spectra were obtained using electrospray
ionization.
trans-2,4-Dichloro-6-styrylpyrimidine
(1)
On the basis of the coupling described by
Tan
et al.[63]trans-2-phenylvinylboronic
acid (2.546 g, 17.2 mmol), K3PO4 (7.307 g, 34.4
mmol), and PdCl2(PPh3)2 (0.362 g,
0.52 mmol) were dissolved in 100 mL ofTHF. To this mixture was added
2,4,6-trichloropyrimidine (3.156 g, 17.2 mmol) dissolved in 20 mL
ofTHF, producing a cloudy yellow suspension. H2O (15 mL)
was added, and the now clear solution was heated at reflux for 7 h.
Approximately 100 mL ofH2O was added, and the biphasic
mixture was extracted three times with ether. The combined organic
layers were washed with brine and dried over anhydrous MgSO4, and the solvent was removed with a rotary evaporator. The product
was purified by column chromatography (5–10% EtOAc in hexanes)
to provide 1 (3.161 g, 73%). 1H NMR (500 MHz,
CDCl3): δ 6.95 (d, J = 15.87 Hz,
1 H), 7.22 (s, 1 H), 7.41 (m, 3 H), 7.59 (dd, J =
7.45, 2.08 Hz, 2 H), 7.96 (d, J = 15.87 Hz, 1 H). 13C NMR (500 MHz, CDCl3): δ 117.1, 123.0,
128.2, 129.2, 130.6, 134.8, 140.9, 160.7, 162.8, 166.6. HRMS (ESI+): m/z calcd for C12H9N2Cl2+ 251.0143, found 251.0101.
Mp: 119–121 °C (recrystallized from EtOAc/hex).
Solution
Irradiations of trans-2,4-Dichloro-6-styrylpyrimidine
(1) in Benzene, Acetonitrile, and Methanol
Solutions
of 750 mg (2.98 mmol) of 1 were prepared in 150 mL ofbenzene, acetonitrile, and methanol. The resulting solution was placed
in a photochemical reaction assembly consisting of a water-cooled
borosilicate immersion well and surrounding photochemical reactor
and was subsequently degassed with vigorous bubbling ofN2 gas for 1.5 h. Irradiation was performed using a 450 W medium-pressure
mercury arc lamp for 4–5 h, with mixing of the solution accomplished
by continuous bubbling ofN2 through the reaction mixture.
cis-2,4-Dichloro-6-styrylpyrimidine (cis-1)
Isolated from solution irradiations of 1 in benzene,
acetonitrile, and methanol. 1H NMR
(500 MHz, CDCl3): δ 6.49 (d, J =
12.22 Hz, 1 H), 7.01 (s, 1 H), 7.15 (d, J = 12.43
Hz, 1 H), 7.27–7.33 (m, 2 H), 7.33–7.38 (m, 3 H). 13C NMR (500 MHz, CDCl3): δ 118.7, 126.2,
128.6, 128.7, 129.1, 134.8, 140.6, 160.6, 161.8, 167.3. HRMS (ESI+): m/z calcd for C12H9N2Cl2+ 251.0143, found 251.0140.
Mp: 47–48 °C (recrystallized from hexanes).
Isolation
of 1,3-Bis(2,4-dichloropyrimid-6-yl)-2,4-diphenylcyclobutanes 2–5 and 7–10
The reaction mixtures from the preceding solution-state
irradiations of 1 were combined, and separation of the
photoproducts was accomplished by multiple rounds offlash column
chromatography using EtOAc/hexanes. Additional separations involving
preparative thin-layer chromatography were necessary to isolate some
of the lower-yielding photoproducts (developed with EtOAc/hexanes
or CH2Cl2/EtOAc).
A 0.500 g portion (1.99 mmol) oftrans-2,4-dichloro-6-styrylpyrimidine
(1) was dissolved in
10 mL of 25%, by weight, NaOMe/MeOH. The resulting solution was heated
at reflux for 12 h. After being cooled to room temperature, the reaction
mixture was extracted from water three times with Et2O.
The combined organic layers were washed with saturated NaCl solution
and dried over anhydrous MgSO4, and the solvent was removed
with a rotary evaporator. The crude solid was recrystallized from
EtOAc/hexanes to give 0.174 g (0.72 mmol, 36% yield) of pure 12. 1H NMR (500 MHz, CDCl3): δ
4.00 (s, 3 H), 4.07 (s, 3 H), 6.35 (s, 1 H), 6.95 (d, J = 15.63 Hz, 1 H), 7.34 (t, J = 7.57 Hz, 1 H), 7.39
(t, J = 7.32 Hz, 2 H), 7.59 (d, J = 7.32 Hz, 2 H), 7.87 (d, J = 15.87 Hz, 1 H). 13C NMR (500 MHz, CDCl3): δ 53.7, 54.6, 99.5,
125.5, 127.4, 128.7, 128.9, 135.8, 136.1, 164.0, 165.1, 172.3. HRMS
(ESI+): m/z calcd for C14H15N2O2+ 243.1134, found
243.1127. Mp: 47–48 °C (recrystallized from EtOAc/hexanes).
trans-4-Styrylpyrimidine (13)
A 0.400 g portion (3.5 mmol) of4-chloropyrimidine, 0.516 g (3.5
mmol) oftrans-2-phenylvinylboronic acid, 0.074 g
(0.105 mmol) ofPd(Cl2)(PPh3)2, and
2.23 g (10.5 mmol) ofK3PO4 were combined in
26 mL ofTHF. To this heterogeneous mixture was added 3.24 mL ofH2O. The resulting solution was heated to reflux overnight.
The reaction mixture was cooled to room temperature, and approximately
50 mL ofwater was added. The resulting biphasic mixture was extracted
three times with ether. The combined organic layers were washed with
brine and dried over anhydrous MgSO4, and the solvent was
removed with a rotary evaporator. The product was purified by column
chromatography (25% EtOAc in hexanes) to provide pure 13 (0.442 g, 70% yield). 1H NMR (500 MHz, CDCl3): δ 7.02 (d, J = 15.87 Hz, 1 H), 7.26 (d, J = 5.15 Hz, 1 H), 7.30–7.41 (m, 3 H), 7.56 (d, J = 7.07 Hz, 2 H), 7.86 (d, J = 15.86 Hz,
1 H), 8.63 (d, J = 5.15 Hz, 1 H), 9.15 (s, 1 H). 13C NMR (500 MHz, CDCl3): δ 118.4, 125.5,
127.6, 128.7, 129.3, 135.5, 137.4, 157.2, 158.8, 162.1. HRMS (ESI+): m/z calcd for C12H11N2+ 183.0922, found 183.0919. Mp: 70–71
°C (recrystallized from EtOAc/hexanes).
trans-2,4-Dichloro-6-styrylpyridine
(14)
A 0.500 g portion (2.74 mmol) of2,4,6-trichloropyridine,
0.487 g (3.29 mmol) of trans-2-phenylvinylboronic
acid, 0.057 g (0.082 mmol) ofPd(Cl2)(PPh3)2, and 1.17 g (5.48 mmol) ofK3PO4 were
combined in 20 mL ofTHF. To this heterogeneous mixture was added
2.5 mL ofH2O. The resulting solution was heated to reflux
for 20 h. After being cooled to room temperature, the resulting residue
was extracted from water three times with ether. The combined organic
layers were washed with brine and , dried over anhydrous MgSO4, and the solvent was removed with a rotary evaporator. The
product was purified by column chromatography (5–10% EtOAc
in hexanes) to provide pure 14 (0.323 g, 47% yield). 1H NMR (500 MHz, CDCl3): δ 7.01 (d, J = 16.08 Hz, 1 H), 7.19 (s, 1 H), 7.25 (s, 1 H), 7.34 (t, J = 7.07 Hz, 1 H), 7.40 (t, J = 7.50 Hz,
2 H), 7.57 (d, J = 7.29 Hz, 2 H), 7.70 (d, J = 15.87 Hz, 1 H). 13C NMR (500 MHz, CDCl3): δ 120.6, 121.9, 125.1, 127.4, 128.8, 129.0, 135.6,
135.7, 145.8, 151.7, 157.1. HRMS (ESI+): m/z calcd for C13H10NCl2+ 250.0190, found 250.0188. Mp: 36–38 °C (recrystallized
from EtOAc/hexanes).
A 27 mg portion ofNaH (0.67 mmol, 60%
dispersion in mineral oil) was added to 4 mL ofTHF. To this suspension
was added 2,4-dichloro-6-methylpyrimide (0.100 g, 0.61 mmol) dissolved
in 2 mL ofTHF. The resulting cloudy yellow solution was stirred for
10 min at room temperature, after which 140 μL (1.23 mmol) of2-pyridylcarboxaldehyde was added dropwise. Upon complete addition
of the aldehyde, the reaction mixture turned from a cloudy yellow
to a clear orange. The reaction was stirred at room temperature for
30 min, quenched with H2O, and extracted three times with
ether. The combined organic layers were washed with saturated NaCl
solution and dried over anhydrous magnesium sulfate. After removal
of solvent by a rotary evaporator, the resulting residue was purified
by MPLC on a silica gelcolumn using a 0–50% 1% TEA in EtOAc/hexanes
gradient elution to provide 46 mg (0.18 mmol, 30% yield) of 15. 1H NMR (500 MHz, CDCl3): δ
7.26 (s, 1 H), 7.29 (ddd, J = 7.56, 4.77, 1.18 Hz,
1 H), 7.46 (d, J = 7.72 Hz, 1 H), 7.56 (d, J = 15.44 Hz, 1 H), 7.75 (td, J = 7.66,
1.82 Hz, 1 H), 8.00 (d, J = 15.22 Hz, 1 H), 8.67
(d, J = 3.65 Hz, 1 H). 13C NMR (500 MHz,
CDCl3): δ 118.2, 124.2, 125.1, 126.7, 137.0, 139.0,
150.2, 152.9, 160.6, 163.0, 165.9. HRMS (ESI+): m/z calcd for C11H8N3Cl2+ 252.0095, found 252.0095. Mp: 153–154
°C (recrystallized from EtOAc/hexanes).
A 108 mg portion ofNaH (2.70 mmol, 60%
dispersion in mineral oil) was added to 8 mL ofTHF. To this suspension
was added 2,4-dichloro-6-methylpyrimide (0.200 g, 1.22 mmol) dissolved
in 4 mL ofTHF. The resulting cloudy yellow solution was stirred for
5 min at room temperature, after which 150 μL (1.23 mmol) of4-methoxybenzaldehyde was added dropwise. The reaction mixture was
stirred at room temperature under a constant weak stream ofnitrogen,
with the N2 efflux passing directly from the flask through
a needle fitted with a Drierite drying tube. Under these conditions,
the solvent was allowed to slowly evaporate, leaving behind a reddish
orange solid. The residue was dissolved in CH2Cl2 and extracted from water three times. The combined organic layers
were washed with saturated NaCl solution and and dried over anhydrous
magnesium sulfate. After removal of solvent by rotary evaporation,
the resulting residue was purified by MPLC on a silica gelcolumn
using a 35–100% CH2Cl2/hexanes gradient
elution to provide 54 mg (0.19 mmol, 15% yield) of 16. 1H NMR (500 MHz, CDCl3): δ 3.86 (s,
3 H), 6.81 (d, J = 15.65 Hz, 1 H), 6.94 (d, J = 8.79 Hz, 2 H), 7.18 (s, 1 H), 7.55 (d, J = 8.79 Hz, 2 H), 7.92 (d, J = 15.86 Hz, 1 H). 13C NMR (500 MHz, CDCl3): δ 55.4, 114.5, 116.4,
120.5, 127.5, 129.8, 140.5, 160.4, 161.5, 162.3, 166.8. HRMS (ESI+): m/z calcd for C13H11N2OCl2+ 281.0248, found 281.0249.
Mp: 127–128 °C (recrystallized from EtOAc/hexanes).
Solid-State Irradiations/Rate Studies
Irradiations
were accomplished using a 68 W compact fluorescent light bulb (300
W incandescent equivalent, 2700 K color temperature) placed in a 0.5
m3 box that was completely encased in aluminumfoil. With
this setup the air temperature in the irradiation box did not rise
above 30 °C, and the temperature on the water-cooled plate was
a constant 23–25 °C. Prior to irradiation of each sample,
the bulb was allowed to warm up for at least 30 min. For each irradiation
45–50 mg ofazastilbene (compounds 1 and 12–16, each recrystallized from EtOAc/hexanes)
was ground to a fine powder using a mortar and pestle. The powder
was then spread evenly on a water-cooled borosilicate glass plate
over an area of approximately 9 × 9 cm. The sample was then covered
with a borosilicate glass plate, which was firmly pressed into place
to further ensure an even distribution of the solid. The samples were
placed approximately 7–8 cm beneath the 68 W bulb and irradiated
for times ranging from 2 to 24 h, depending on the rate of photocycloaddition.
Time points were taken every 10 min for the first 2 h and generally
every 30–60 min thereafter. Time-point samples were obtained
using a microspatula after brisk removal of the cover slide, and efforts
were made to ensure that these samples were representative of a broad
area of the irradiated solid. The crude irradiation samples were dissolved
in CDCl3, and analyzed for relative integration of proton
signals using a 500 MHz narrow-bore spectrometer.
Solution-State
Irradiations/Rate Studies
The same irradiation
setup used for the solid-state rate studies was used for the solution-state
rate studies, with the exception that the samples were not water-cooled.
For each sample, 40 mM solutions of each azastilbene (compounds 2 and 12–16) in CDCl3 were placed in sealed borosilicate NMR tubes. The samples
were irradiated simultaneously for 24 h, removed from the light source,
and directly analyzed by 1H NMR using a 500 MHz narrow-bore
spectrometer. Evaporated solvent was replaced, and the samples were
irradiated for an additional 24 h. This was repeated five times for
a total of 120 h of irradiation.
Data Analysis
Data analysis for the solid-state reactions
was accomplished using Graphpad Prism 5.0, fitted to a first-order
exponential decay curve. Data analysis for solution-state reactions
was performed using OriginPro 8.5, with data fitted to an exponential
least-squares fit curve.
Crystallography
Cyclobutane 2 was recrystallized from
MeOH. The azastilbenes 1, -1, and 16 were
recrystallized from EtOAc/hexanes. Crystal and structure refinement
data can be found in the Supporting Information.
Authors: Yvette S Mimieux Vaske; Maximillian E Mahoney; Joseph P Konopelski; David L Rogow; William J McDonald Journal: J Am Chem Soc Date: 2010-08-18 Impact factor: 15.419
Authors: Julie A Pollock; Suzanne E Wardell; Alexander A Parent; David B Stagg; Stephanie J Ellison; Holly M Alley; Christina A Chao; Scott A Lawrence; James P Stice; Ivan Spasojevic; Jennifer G Baker; Sung Hoon Kim; Donald P McDonnell; John A Katzenellenbogen; John D Norris Journal: Nat Chem Biol Date: 2016-08-08 Impact factor: 15.040