| Literature DB >> 24837086 |
Patricia Bogdanov1, Lidia Corraliza1, Josep A Villena2, Andrea R Carvalho3, José Garcia-Arumí3, David Ramos4, Jesús Ruberte4, Rafael Simó1, Cristina Hernández1.
Abstract
BACKGROUND: To characterize the sequential events that are taking place in retinal neurodegeneration in a murine model of spontaneous type 2 diabetes (db/db mouse).Entities:
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Year: 2014 PMID: 24837086 PMCID: PMC4023966 DOI: 10.1371/journal.pone.0097302
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Blood glucose levels (black marks) and body weight (white marks) in db/+ (circles; n = 12) and db/db mice (triangles; n = 12).
Values are expressed as mean ± SD. *p<0.05; **p<0.001.
Figure 2b-wave implicite time (ms) in non diabetic and diabetic mice at 8 (A), 16 (C) and 24 weeks (E). ΣOPs implicit time (ms) (G). b-wave amplitude (µV) in non diabetic and diabetic mice at 8 (B), 16 (D) and 24 weeks (F). ΣOPs amplitude (µV) (H). White bars: non diabetic mice. Black bars: diabetic mice. Data are expressed as mean ± SD. *p<0.05; **p<0.01;***p<0.001.
Figure 3a-wave implicit time (ms) in non diabetic and diabetic mice at 8 (A), 16 (C) and 24 weeks (E). a-wave amplitude (µV) in non diabetic and diabetic mice at 8 (B), 16 (D) and 24 weeks (F). White bars: non diabetic mice. Black bars: diabetic mice. Data are expressed as mean ± SD. *p<0.05.
Figure 4Thickness of total retina (A), outer nuclear layer (B) and inner nuclear layer (C).
The measurements have been performed in the central retina and in peripheral retina. Results are expressed as mean ± SD. *p<0.05 between non diabetic (white bars) and diabetic (black bars) mice.
Figure 5Images demonstrating the progressive loss of cells in retinal ganglion layer (GCL).
A) Hematoxylin and eosin stained central retina in a representative case of a diabetic mouse (upper panel) and a non-diabetic mouse (lower panel) of 8, 16 and 24 weeks old. In the diabetic retina a loss of cells in GCL was observed. B) Cell number in GCL in control and diabetic mice in central retina. C) Comparison of TUNEL immunofluorescence (green) between representative samples from a diabetic (upper panel) and a non-diabetic mouse (lower panel) at 8 weeks, 16 and 24 weeks. Nuclei were labeled with Hoechst (blue). D) Percentage of TUNEL positive cells in the GCL in non-diabetic and diabetic mice at 8, 16 and 24 weeks (upper panel). ONL: outer nuclear layer; OPL: outer plexiform layer; INL: inner nuclear layer; IPL: inner plexiform layer; GCL: ganglion cell layer. Results are expressed as mean ± SD. White bars: non-diabetic mice; Black bars: diabetic mice. *p<0.05, **p<0.001 between non-diabetic and diabetic mice.
Figure 6Comparison of cleaved caspase-3 immunofluorescence (green) between representative samples from a diabetic (upper panel) and a non-diabetic mouse (lower panel) at 8, 16 and 24 weeks.
Insets show the increased expression of cleaved caspase-3 in cells residing in the ganglion cell layer (GCL) in db/db mice. Nuclei counterstained with Hoescht (blue). ONL: outer nuclear layer; INL: inner nuclear layer; C-: negative control; C+: positive control mouse jejunal villi. Scale bars: 40 µm.
Figure 7Transmission electron micrographs of photoreceptors in a representative case of a non-diabetic (left panel) and a diabetic mouse (right panel) 8 weeks old.
Arrows indicate nuclear fragmentation. Scale bars: 6.71 µm.
Figure 8Glial activation.
A) Comparison of GFAP immunofluorescence (green) between representative samples from a diabetic (upper panel) and a non-diabetic mouse (lower panel) at 8 weeks, 16 and 24 weeks. In the diabetic retina, the Müller cells’ endfeet show abundant GFAP immunofluorescence and the radial processes stain intensely throughout both the inner and outer retina. Nuclei were labeled with DAPI (blue). ONL: outer nuclear layer; INL: inner nuclear layer; GCL: ganglion cell layer. B) Quantification of glial activation based on extent of GFAP staining.
Figure 9Beneficial effects of lowering blood glucose by using restrictive diet on retinal neurodegeneration in db/db mice.
A) Comparison of TUNEL immunofluorescence (green) between representative samples from a diabetic mouse (db/db) ad libitum (AL) feeding (upper panel), a db/db mouse under dietary restriction (RD) (middle panel) and a control (db/+) mouse (lower panel) at 10 weeks. B) Percentage of TUNEL positive cells in the GCL in db/db mice ad libitum feeding (black bars), db/db mice under dietary restriction (gray bars) and control (db/+) mice (white bars) at 10 weeks. n = 10 each group. *p<0.05 in comparison with db/db feeding AL. **p<0.01 in comparison with db/+. C) Comparison of GFAP immunoreactivity (green) in the central retina between representative samples from a diabetic mouse (db/db) AL feeding (upper panel), a db/db mouse under dietary restriction (middle panel) and a control (db/+) mouse (lower panel) at 10 weeks. Nuclei were labeled with Hoechst (blue). ONL: outer nuclear layer; INL: inner nuclear layer; GCL: ganglion cell layer. D) Quantification of glial activation based on scoring system (see text) (n = 10 each group). E) ΣOPs implicit time (ms) and F) ΣOPs amplitude (µV). White bars: before diet intervention. Black bars: after diet intervention. Data are expressed as mean ± SD. *p<0.05; **p<0.01.
Figure 10Comparison of GLAST immunofluorescence between representative samples from non-diabetic and diabetic mice.
A) GLAST immunofluorescence (red) of representative samples from non-diabetic and diabetic mice at 8 weeks, 16 and 24 weeks. Nuclei were labeled with Hoechts (blue). ONL: outer nuclear layer; INL: inner nuclear layer; GCL: ganglion cell layer. B) Quantification of GLAST immunofluorescence in non-diabetic (white bars) and diabetic mice (black bars). A.U.: arbitray units. *p<0.05; **p<0.001 between non-diabetic and diabetic mice.
Genes up-regulated in retinas of diabetic mice.
| ID | Symbol | Gene name | LogFC | P Value |
| 71760 | Agxt2l1 | Alanine-glyoxylate aminotransferase 2-like 1 | 0.862 | 2.9E-07 |
| 19878 | Rock2 | Rho-associated, coiled-coil containing protein kinase 2 | 0.819 | 1.2E-06 |
| 66594 | Uqcr11 | Ubiquinol-cytochrome c reductase, complex III subunit XI | 0.815 | 4.9E-06 |
| 11811 | Apobec2 | Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 | 0.791 | 8.0E-08 |
| 20341 | Selenbp1 | Selenium binding protein 1 | 0.769 | 1.8E-04 |
| 57441 | Gmnn | Geminin, DNA replication inhibitor | 0.706 | 2.5E-05 |
| 15122 | Hba-a1 | Haemoglobin alpha, adult chain 1/2 | 0.691 | 1.4E-03 |
| 16668 | Krt18 | Keratin 18 | 0.691 | 9.3E-09 |
| 11815 | Apod | Apolipoprotein D | 0.677 | 5.4E-03 |
| 110880 | Scn4a | Sodium channel, voltage-gated, type IV, alpha subunit | 0.599 | 7.8E-08 |
| 19872 | Rny1 | RNA, Ro-associated Y1 | 0.591 | 2.9E-04 |
| 20557 | Slfn3 | Schlafen Family Member 12 | 0.577 | 2.4E-05 |
| 14719 | Got2 | Glutamic-oxaloacetic transaminase 2 | 0.530 | 2.1E-03 |
| 12865 | Cox7a1 | Cytochrome c oxidase subunit VIIa polypeptide 1 | 0.511 | 6.7E-04 |
| 56338 | Txnip | Thioredoxin interacting protein | 0.509 | 6.5E-05 |
| 83554 | Fstl3 | Follistatin-like 3 | 0.498 | 1.3E-05 |
| 12925 | Crip1 | Cysteine-rich protein 1 | 0.496 | 1.0E-06 |
| 319178 | Hist1h2bb | Histone cluster 1, h2bb | 0.486 | 3.3E-05 |
| 11303 | Abca1 | ATP-binding cassette, sub-family A (ABC1), member 1 | 0.485 | 1.7E-06 |
| 17873 | Gadd45b | Growth arrest and DNA-damage-inducible, beta | 0.467 | 8.2E-03 |
| 19725 | Rfx2 | Regulatory factor x,2 | 0.449 | 9.6E-04 |
| 66929 | Asf1b | ASF1 anti-silencing function 1 homolog B | 0.447 | 2.4E-05 |
| 70893 | Glb1l3 | Galactosidase, beta 1 like 3 | 0.441 | 9.1E-05 |
| 11830 | Aqp5 | Aquaporin 5 | 0.439 | 7.1E-03 |
| 30794 | Pdlim4 | PDZ and LIM domain 4 | 0.437 | 1.2E-05 |
| 19784 | Rprl2 | Ribonuclease P RNA-like 2 | 0.427 | 8.3E-04 |
| 75316 | Taf1d | TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D | 0.418 | 4.5E-05 |
| 11927 | Atox1 | ATX1 (antioxidant protein 1) homolog 1 | 0.399 | 3.6E-05 |
| 109900 | Asl | Argininosuccinatelyase | 0.397 | 1.3E-06 |
| 108015 | Chrnb4 | Cholinergic receptor, nicotinic, beta polypeptide 4 | 0.393 | 1.5E-03 |
| 15561 | Htr3a | 5-hydroxytryptamine (serotonin) receptor 3A | 0.388 | 6.0E-04 |
| 319155 | Hist1h4c | Histone cluster 1, H4c | 0.387 | 1.1E-03 |
| 12306 | Anxa2 | Annexin A2 | 0.387 | 4.3E-04 |
| 11854 | Rhod | Ras homolog gene family, member D | 0.386 | 2.8E-04 |
| 18129 | Notch2 | Notch gene homolog 2 (Drosophila) | 0.385 | 1.6E-05 |
| 77462 | Tmem116 | Transmembrane protein 116 | 0.380 | 9.3E-05 |
| 70807 | Arrdc2 | Arrestin domain containing 2 | 0.378 | 1.1E-03 |
| 11853 | Rhoc | Ras homolog gene family, member C | 0.372 | 2.9E-05 |
| 227292 | Ctdsp1 | CTD small phosphatase 1 | 0.372 | 1.6E-03 |
| 171209 | Accn3 | Amiloride-sensitive cation channel 3 | 0.371 | 2.8E-03 |
| 69875 | Ndufa11 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11 | 0.370 | 3.6E-06 |
| 65972 | Ifi30 | Interferon, gamma-inducible protein 30 | 0.368 | 5.5E-04 |
| 74760 | Rab3il1 | RAB3A interacting protein (rabin3)-like 1 | 0.363 | 1.2E-04 |
| 263406 | Plekhg3 | Pleckstrin homology domain containing, family G member 3 | 0.362 | 6.9E-05 |
| 71660 | Rarres2 | Retinoic acid receptor responder (tazarotene induced) 2 | 0.355 | 6.1E-03 |
| 212974 | Athl1 | ATH1, acid trehalase-like 1 | 0.354 | 1.2E-03 |
| 12036 | Bcat2 | Branched chain amino-acid transaminase 2 | 0.354 | 1.2E-05 |
| 68337 | Crip2 | Cysteine-rich protein 2 | 0.350 | 5.4E-03 |
| 22228 | Ucp2 | Uncoupling protein 2 | 0.349 | 3.8E-03 |
| 66230 | Mrps28 | Mitochondrial ribosomal protein S28 | 0.349 | 1.2E-03 |
Genes down-regulated in retinas of diabetic mice.
| ID | Symbol | Gene name | LogFc | P value |
| 12182 | Bst1 | Bone marrow stromal cell antigen | −0.495 | 9.0E-06 |
| 219257 | Pcdh20 | Protocadherin | −0.440 | 4.0E-04 |
| 319554 | Idi1 | Isopentenyl-diphosphate delta isomerase 1 | −0.438 | 6.8E-05 |
| 12293 | Cacna2d1 | Calcium channel, voltage-dependent, alpha 2/delta subunit 1 | −0.437 | 4.0E-04 |
| 331487 | Uprt | Uracil phosphoribosyltransferase (FUR1) homolog | −0.435 | 8.6E-04 |
| 83924 | Gpr137b | G protein-coupled receptor 137B | −0.407 | 1.9E-03 |
| 66917 | Chordc1 | Cysteine and histidine-rich domain (CHORD) containing | −0.399 | 3.3E-04 |
| 66637 | Tsen15 | tRNA splicing endonuclease 15 homolog | −0.398 | 7.9E-03 |
| 20383 | Srsf3 | Terine/arginine-rich splicing factor 3 | −0.390 | 5.4E-03 |
| 26557 | Homer2 | Homer homolog 2 | −0.390 | 1.3E-03 |
| 67681 | Mrpl18 | Mitochondrial ribosomal protein L18 | −0.383 | 9.5E-03 |
| 217951 | Tmem196 | Transmembrane protein | −0.383 | 9.9E-04 |
| 105727 | Slc38a1 | Solute carrier family 38, member 1 | −0.362 | 4.7E-04 |
| 74182 | Gpcpd1 | Glycerophosphocholine phosphodiesterase GDE1 homolog | −0.356 | 5.7E-06 |
| 229279 | Hnrnpa3 | Heterogeneous nuclear ribonucleoprotein A3 | −0.352 | 9.5E-05 |
| 21333 | Tac1 | Tachykinin, precursor 1 | −0.352 | 5.2E-03 |
| 14405 | Gabrg1 | Gamma-aminobutyric acid (GABA) A receptor, gamma 1 | −0.352 | 4.2E-03 |
| 102910 | Armcx4 | Armadillo repeat containing, X-linked 4 | −0.351 | 9.7E-05 |
| 59058 | Bhlhe22 | Basic helix-loop-helix family, member e22 | −0.351 | 1.9E-03 |
| 14401 | Gabrb2 | Gamma-aminobutyric acid (GABA) A receptor, beta 2 | −0.349 | 5.6E-05 |
| 57329 | Otor | Otoraplin | −0.345 | 1.8E-03 |
| 70930 | Nol8 | Nucleolar protein 8 | −0.343 | 3.1E-04 |
| 70620 | Ube2v2 | Ubiquitin-conjugating enzyme E2 variant 2 | −0.342 | 9.7E-04 |
| 331487 | Uprt | Uracil phosphoribosyltransferase (FUR1) homolog | −0.342 | 1.2E-03 |
| 56353 | Rybp | RING1 and YY1 binding protein | −0.341 | 9.6E-03 |
| 71599 | Senp8 | SUMO/sentrin specific peptidase family member 8 | −0.339 | 8.9E-03 |
| 15289 | Hmgb1 | High mobility group box 1 | −0.334 | 6.3E-03 |
| 15505 | Hsph1 | Heat shock 105 kDa/110 kDa protein | −0.333 | 1.1E-03 |
| 93739 | Gabarapl2 | Gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 | −0.331 | 7.1E-03 |
| 668923 | Zfp442 | Zinc finger protein 442 | −0.328 | 6.0E-03 |
| 72289 | Malat1 | Metastasis associated lung adenocarcinoma transcript 1 | −0.325 | 1.1E-04 |
| 14009 | Etv1 | Ets variant 1 | −0.325 | 6.7E-03 |
| 11798 | Xiap | Apoptotic suppressor protein | −0.323 | 2.5E-04 |
| 17968 | Ncam2 | Neural cell adhesion molecule 2 | −0.320 | 6.1E-04 |
| 76184 | Abca6 | ATP-binding cassette, sub-family A (ABC1), member 6 | −0.314 | 1.4E-03 |
| 12300 | Cacng2 | Calcium channel, voltage-dependent, gamma subunit 2 | −0.314 | 4.8E-03 |
| 109905 | Rap1a | RAP1A, member of RAS oncogene family | −0.314 | 8.5E-04 |
| 71206 | Katnal2 | Katanin p60 subunit A-like 2 | −0.312 | 4.3E-03 |
| 20541 | Slc8a1 | Solute carrier family 8, member 1 | −0.312 | 3.1E-03 |
| 14417 | Gad2 | Glutamate decarboxylase 2 | −0.311 | 6.6E-03 |
| 14823 | Grm8 | Glutamate receptor, metabotropic 8 | −0.310 | 2.0E-03 |
| 14799 | Gria1 | Glutamate receptor, ionotropic, AMPA 1 | −0.310 | 2.8E-04 |
| 19128 | Pros1 | Protein S | −0.309 | 1.1E-03 |
| 320772 | Mdga2 | MAM domain containing glycosylphosphatidylinositol anchor 2 | −0.307 | 2.9E-04 |
| 243382 | Ppm1k | Protein phosphatase 1K | −0.306 | 1.5E-03 |
| 246229 | Bivm | Basic, immunoglobulin-like variable motif containing | −0.305 | 8.1E-05 |
| 228942 | Cbln4 | Cerebellin 4 | −0.304 | 1.4E-03 |
| 11658 | Alcam | Activated leukocyte cell adhesion molecule | −0.303 | 1.8E-03 |
| 18718 | Pip4k2a | Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha | −0.302 | 2.9E-04 |
| 18231 | Nxph1 | Neurexophilin 1 | −0.302 | 8.0E-04 |
Gene enrichment analysis of genes differentially expressed in retinas of diabetic mice.
| Ontology | GO ID | GO Term |
|
|
| |||
| MF | GO:0003723 | RNA binding | 6.18E-08 |
| MF | GO:0004971 | Alpha-amino-3-hydroxy-5-methyl-4 isoxazole propionate selective glutamate receptor activity | 1.38E-05 |
| MF | GO:0005488 | Binding | 2.8E-05 |
| MF | GO:0022891 | Substrate-specific transporter activity | 2.1E-04 |
| MF | GO:0005313 | L-glutamate transporter activity | 2.7E-04 |
| MF | GO:0046943 | Carboxylic acid transporter activity | 4.8E-04 |
| BP | GO:0007268 | Synaptic transmission | 2.4E-06 |
| BP | GO:0007268 | Transmission of nerve impulse | 2.98E-06 |
| BP | GO:0035637 | Multicellular organismal signaling | 2.98E-06 |
| BP | GO:0015931 | Nucleobase-containing compound transport | 1.0E-04 |
| BP | GO:0044237 | Cellular metabolic process | 1.0E-04 |
| BP | GO:0050657 | Nucleic acid transport | 1.9E-04 |
| CC | GO:0043005 | Neuron projection | 3.1E-07 |
| CC | GO:0045202 | Synapse | 5.5E-06 |
| CC | GO:0005622 | Intracellular | 5.6E-06 |
| CC | GO:0044456 | Synapse part | 5.9E-06 |
| CC | GO:0032279 | Asymmetric synapse | 2.2E-05 |
| CC | GO:0044424 | Intracellular part | 2.4E-05 |
|
| |||
| MF | GO:0003735 | Structural constituent of ribosome | 8.1E-05 |
| MF | GO:0015078 | Hydrogen ion transmembrane transporter activity | 3.2E-04 |
| MF | GO:0004364 | Glutathione transferase activity | 6.6E-04 |
| MF | GO:0019843 | rRNA binding | 7.7E-04 |
| BP | GO:0006979 | Response to oxidative stress | 6.3E-05 |
| BP | GO:0007589 | Body fluid secretion | 1.4E-04 |
| BP | GO:0016049 | Cell growth | 4.6E-04 |
| BP | GO:0034599 | Cellular response to oxidative stress | 6.3E-04 |
| BP | GO:0090208 | Positive regulation of triglyceride metabolic process | 7.2E-04 |
| BP | GO:0070301 | Cellular response to hydrogen peroxide | 8.5E-04 |
| CC | GO:0005840 | Ribosome | 1.4E-07 |
| CC | GO:0070469 | Respiratory chain | 5.8E-06 |
| CC | GO:0022626 | Cytosolic ribosome | 1.0E-05 |
| CC | GO:0044429 | Mitochondrial part | 1.3E-05 |
| CC | GO:0044444 | Cytoplasmic part | 1.3E-05 |
| CC | GO:0005743 | Mitochondrial inner membrane | 1.4E-05 |
Only the six most significant gene ontology (GO) terms in each category are shown (MF, molecular function; BP, biological process; CC, cellular compartment).
Figure 11Relative expression of genes involved neurotransmission (A) and mitochondrial function (B) in retinas of diabetic mice (black bars) and control non-diabetic mice (white bars) was assessed by real-time quantitative PCR.
Results are expressed as mean ± SEM, n = 9–10/group. *p<0.05.