Literature DB >> 24835677

Characterization of a computationally designed water-soluble human μ-opioid receptor variant using available structural information.

Xuelian Zhao1, Jose Manuel Perez-Aguilar, Felipe Matsunaga, Mitchell Lerner, Jin Xi, Bernard Selling, A T Charlie Johnson, Jeffery G Saven, Renyu Liu.   

Abstract

BACKGROUND: The recent X-ray crystal structure of the murine μ-opioid receptor (MUR) allowed the authors to reengineer a previously designed water-soluble variant of the transmembrane portion of the human MUR (wsMUR-TM).
METHODS: The new variant of water-soluble MUR (wsMUR-TM_v2) was engineered based on the murine MUR crystal structure. This novel variant was expressed in Escherichia coli and purified. The properties of the receptor were characterized and compared with those of wsMUR-TM.
RESULTS: Seven residues originally included for mutation in the design of the wsMUR-TM were reverted to their native identities. wsMUR-TM_v2 contains 16% mutations of the total sequence. It was overexpressed and purified with high yield. Although dimers and higher oligomers were observed to form over time, the wsMUR-TM_v2 stayed predominantly monomeric at concentrations as high as 7.5 mg/ml in buffer within a 2-month period. Its secondary structure was predominantly helical and comparable with those of both the original wsMUR-TM variant and the native MUR. The binding affinity of wsMUR-TM_v2 for naltrexone (K(d) approximately 70 nM) was in close agreement with that for wsMUR-TM. The helical content of wsMUR-TM_v2 decreased cooperatively with increasing temperature, and the introduction of sucrose was able to stabilize the protein.
CONCLUSIONS: A novel functional wsMUR-TM_v2 with only 16% mutations was successfully engineered, expressed in E. coli, and purified based on information from the crystal structure of murine MUR. This not only provides a novel alternative tool for MUR studies in solution conditions but also offers valuable information for protein engineering and structure-function relations.

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Year:  2014        PMID: 24835677      PMCID: PMC4175066          DOI: 10.1097/ALN.0000000000000308

Source DB:  PubMed          Journal:  Anesthesiology        ISSN: 0003-3022            Impact factor:   7.892


  26 in total

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2.  A fluorescent ligand-binding alternative using Tag-lite® technology.

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Journal:  J Biomol Screen       Date:  2010-10-25

3.  An automated application for deconvolution of circular dichroism spectra of small peptides.

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Journal:  Anal Biochem       Date:  2007-01-19       Impact factor: 3.365

4.  Molecular Dynamics Simulation of WSK-3, a Computationally Designed, Water-Soluble Variant of the Integral Membrane Protein KcsA.

Authors:  Jonathan Bronson; One-Sun Lee; Jeffery G Saven
Journal:  Biophys J       Date:  2005-11-18       Impact factor: 4.033

5.  Effects of sucrose on the internal dynamics of azurin.

Authors:  Patrizia Cioni; Emilia Bramanti; Giovanni B Strambini
Journal:  Biophys J       Date:  2005-03-25       Impact factor: 4.033

6.  Recent progress in the structure determination of GPCRs, a membrane protein family with high potential as pharmaceutical targets.

Authors:  Vadim Cherezov; Enrique Abola; Raymond C Stevens
Journal:  Methods Mol Biol       Date:  2010

7.  The G-protein-coupled receptors in the human genome form five main families. Phylogenetic analysis, paralogon groups, and fingerprints.

Authors:  Robert Fredriksson; Malin C Lagerström; Lars-Gustav Lundin; Helgi B Schiöth
Journal:  Mol Pharmacol       Date:  2003-06       Impact factor: 4.436

Review 8.  Molecular signatures of G-protein-coupled receptors.

Authors:  A J Venkatakrishnan; Xavier Deupi; Guillaume Lebon; Christopher G Tate; Gebhard F Schertler; M Madan Babu
Journal:  Nature       Date:  2013-02-14       Impact factor: 49.962

9.  Structure of the δ-opioid receptor bound to naltrindole.

Authors:  Sébastien Granier; Aashish Manglik; Andrew C Kruse; Tong Sun Kobilka; Foon Sun Thian; William I Weis; Brian K Kobilka
Journal:  Nature       Date:  2012-05-16       Impact factor: 49.962

10.  Human μ Opioid Receptor Models with Evaluation of the Accuracy Using the Crystal Structure of the Murine μ Opioid Receptor.

Authors:  Jose Manuel Perez-Aguilar; Jeffery G Saven; Renyu Liu
Journal:  J Anesth Clin Res       Date:  2012-07-02
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  10 in total

1.  Computational redesign of the lipid-facing surface of the outer membrane protein OmpA.

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2.  QTY code enables design of detergent-free chemokine receptors that retain ligand-binding activities.

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3.  Quantifying the effect of ionic screening with protein-decorated graphene transistors.

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Review 4.  Protein Design: From the Aspect of Water Solubility and Stability.

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Journal:  Chem Rev       Date:  2022-08-03       Impact factor: 72.087

5.  Characterization of an engineered water-soluble variant of the full-length human mu opioid receptor.

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Journal:  J Biomol Struct Dyn       Date:  2019-10-17

6.  Scalable Production of Molybdenum Disulfide Based Biosensors.

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7.  All-Electronic Quantification of Neuropeptide-Receptor Interaction Using a Bias-Free Functionalized Graphene Microelectrode.

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Journal:  ACS Nano       Date:  2018-04-17       Impact factor: 15.881

8.  The C-terminus of the mu opioid receptor is critical in G-protein interaction as demonstrated by a novel graphene biosensor.

Authors:  Chengyu Wen; Bernard Selling; Alexei Yeliseev; Jin Xi; Jose Manuel Perez-Aguilar; Zhaoli Gao; Jeffery G Saven; A T Charlie Johnson; Renyu Liu
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9.  Novel variants of engineered water soluble mu opioid receptors with extensive mutations and removal of cysteines.

Authors:  Jin Xi; Nanmu Yang; Jose Manuel Perez-Aguilar; Bernard Selling; John R Grothusen; Rajan Lamichhane; Jeffery G Saven; Renyu Liu
Journal:  Proteins       Date:  2021-06-29

Review 10.  Membrane proteins: always an insoluble problem?

Authors:  Andrea E Rawlings
Journal:  Biochem Soc Trans       Date:  2016-06-15       Impact factor: 5.407

  10 in total

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