Literature DB >> 24834255

XPD gene polymorphism and colorectal cancer risk.

Seyed Mohammad Hossein Kashfi1, Ehsan Nazemalhosseini Mojarad1, Mahdi Montazer Haghighi2.   

Abstract

Entities:  

Year:  2013        PMID: 24834255      PMCID: PMC4017505     

Source DB:  PubMed          Journal:  Gastroenterol Hepatol Bed Bench        ISSN: 2008-2258


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TO THE EDITOR

We examined Rezaei et al's paper (1) and we are interested in the subject. The study was about the functions of repair genes, their mechanisms in cancer development and associated polymorphisms which increase susceptibility to CRC. As we know Single nucleotide polymorphisms (SNPs) are the most common genetic sequence variation in human genome. SNPs are associated with population diversity, disease susceptibility and individual response to medical therapy (2, 3). In the other hand, the development of CRC is associated with environmental factors, genetic susceptibilities, and their interaction (4). Polymorphisms in DNA repair genes contribute to the variations in individual genetic susceptibility to many types of cancers, such as lung cancer, breast cancer and gastric cancer (5–9). The study population of this paper was heterogeneous in terms of colorectal cancer. The authors mentioned that of 88 colorectal cancer patients enrolled in this study, 32 patients (45%) had a positive family history for colorectal cancer in their first-degree relatives. They didn't determine the type of familial CRC in these patients. We didn't understand whether patients with history of CRC in the first degree relatives were matched the criteria for HNPCC or FAP or not. In familial subgroup, mutations screening in related genes is more important than evaluating SNPs and this is the hallmark of the molecular screening for familial and hereditary diseases. The authors could at least evaluate the SNPs in the disease-causing mutations occurring in genes which totally account for 15%-20% of CRC familial population, including Mismatch Repair (MMR) genes, Tumor suppressor gene APC or the base excision repair gene MUTYH (10). In present study, the authors evaluated the SNP in two groups of sporadic and familial patients with CRC and as we know, some polymorphisms might be more common in familial or hereditary forms of disease than the sporadic forms, and this would affect the result. Moreover, SNP distribution among sporadic or familial cases wasn't present. In the other hand, SNP studies need larger sample size to get more accurate results. Therefore even if, all 88 patients were sporadic or familial cases, a reliable conclusion would not be feasible. So, a case- control study with adequate sample size and well- defined groups is recommended to compare the frequency of the specific allele with patients and healthy subjects.
  10 in total

Review 1.  SNPs: impact on gene function and phenotype.

Authors:  Barkur S Shastry
Journal:  Methods Mol Biol       Date:  2009

2.  Role of DNA repair gene polymorphisms in the efficiency of platinum-based adjuvant chemotherapy for non-small cell lung cancer.

Authors:  Juliette Mathiaux; Valérie Le Morvan; Marina Pulido; Jacques Jougon; Hugues Bégueret; Jacques Robert
Journal:  Mol Diagn Ther       Date:  2011-06-01       Impact factor: 4.074

3.  P21 codon 31 polymorphism associated with cancer among white people: evidence from a meta-analysis involving 78,074 subjects.

Authors:  Fei Liu; Bo Li; Yonggang Wei; Xi Chen; Yu Ma; Lvnan Yan; Tianfu Wen
Journal:  Mutagenesis       Date:  2011-03-17       Impact factor: 3.000

4.  Impact of EXO1 polymorphism in susceptibility to colorectal cancer.

Authors:  Mahdi Montazer Haghighi; Mohammad Yaghoob Taleghani; Seyed Reza Mohebbi; Mohsen Vahedi; Seyed Reza Fatemi; Narges Zali; Atena Irani Shemirani; Mohammad Reza Zali
Journal:  Genet Test Mol Biomarkers       Date:  2010-09-20

5.  Association between XRCC1 ARG399GLN and P53 ARG72PRO polymorphisms and the risk of gastric and colorectal cancer in Turkish population.

Authors:  Ayse Basak Engin; Bensu Karahalil; Ali Esat Karakaya; Atilla Engin
Journal:  Arh Hig Rada Toksikol       Date:  2011-09       Impact factor: 1.948

6.  Distinct genetic alterations in colorectal cancer.

Authors:  Hassan Ashktorab; Alejandro A Schäffer; Mohammad Daremipouran; Duane T Smoot; Edward Lee; Hassan Brim
Journal:  PLoS One       Date:  2010-01-26       Impact factor: 3.240

7.  Polymorphisms of DNA repair genes are associated with renal cell carcinoma.

Authors:  Hiroshi Hirata; Yuji Hinoda; Hideyasu Matsuyama; Yuichiro Tanaka; Naoko Okayama; Yutaka Suehiro; Hong Zhao; Shinji Urakami; Ken Kawamoto; Toshifumi Kawakami; Mikio Igawa; Katsusuke Naito; Rajvir Dahiya
Journal:  Biochem Biophys Res Commun       Date:  2006-02-17       Impact factor: 3.575

8.  Four novel germline mutations in the MLH1 and PMS2 mismatch repair genes in patients with hereditary nonpolyposis colorectal cancer.

Authors:  Mahdi Montazer Haghighi; Ramin Radpour; Katayoun Aghajani; Narges Zali; Mahsa Molaei; Mohammad Reza Zali
Journal:  Int J Colorectal Dis       Date:  2009-05-29       Impact factor: 2.571

9.  A miRNA binding site single-nucleotide polymorphism in the 3'-UTR region of the IL23R gene is associated with breast cancer.

Authors:  Lihong Wang; Wei Liu; Wei Jiang; Jing Lin; Yongdong Jiang; Bo Li; Da Pang
Journal:  PLoS One       Date:  2012-12-11       Impact factor: 3.240

10.  Relationship between XPD Lys 751 Gln polymorphism and colorectal cancer risk: a case-control study in a population-based study.

Authors:  Hojatolah Rezaei; Majid Motovali-Bashi; Kian Khodadad; Ali Elahi; Habib Emami; Hossein Naddaffnia
Journal:  Gastroenterol Hepatol Bed Bench       Date:  2013
  10 in total

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