The 4EGI-1 is the prototypic inhibitor of eIF4E/eIF4G interaction, a potent inhibitor of translation initiation in vitro and in vivo and an efficacious anticancer agent in animal models of human cancers. We report on the design, synthesis, and in vitro characterization of a series of rigidified mimetic of this prototypic inhibitor in which the phenyl in the 2-(4-(3,4-dichlorophenyl)thiazol-2-yl) moiety was bridged into a tricyclic system. The bridge consisted one of the following: ethylene, methylene oxide, methylenesulfide, methylenesulfoxide, and methylenesulfone. Numerous analogues in this series were found to be markedly more potent than the parent prototypic inhibitor in the inhibition of eIF4E/eIF4G interaction, thus preventing the eIF4F complex formation, a rate limiting step in the translation initiation cascade in eukaryotes, and in inhibition of human cancer cell proliferation.
The 4EGI-1 is the prototypic inhibitor of eIF4E/eIF4G interaction, a potent inhibitor of translation initiation in vitro and in vivo and an efficacious anticancer agent in animal models of humancancers. We report on the design, synthesis, and in vitro characterization of a series of rigidified mimetic of this prototypic inhibitor in which the phenyl in the 2-(4-(3,4-dichlorophenyl)thiazol-2-yl) moiety was bridged into a tricyclic system. The bridge consisted one of the following: ethylene, methylene oxide, methylenesulfide, methylenesulfoxide, and methylenesulfone. Numerous analogues in this series were found to be markedly more potent than the parent prototypic inhibitor in the inhibition of eIF4E/eIF4G interaction, thus preventing the eIF4F complex formation, a rate limiting step in the translation initiation cascade in eukaryotes, and in inhibition of humancancer cell proliferation.
Translation initiation
in eukaryotic cells is a highly regulated
process and plays an important role in cell proliferation, differentiation,
survival, and maintenance of homeostasis.[1] Disruption and/or perturbation of cap-dependent translation is associated
with many pathophysiological processes such as Wolcott–Rallison
syndrome, fragile X syndrome,[2] neurodegenerative
disorders such as Alzheimer’s disease, and proliferative disorders
such as malignant transformation.[3,4] Translation
initiation commences with the binding of the eukaryotic initiation
factor 4E (eIF4E) to the mRNA 5′-end-cap (m7GpppN,
where N is any nucleotide and m is a methyl group) structure, which
is present in all mRNAs. Protein–protein interaction between
eIF4E and eIF4G, the scaffolding protein, enables the recruitment
of eIF4A, a DEAD-box RNA helicase, and formation of the eIF4F complex
that unwinds the secondary structure of mRNAs and allows the docking
and assembly of the 43S pre-initiation complex.[5] The 40S ribosome complex then traverses the 5′ untranslated
region (UTR) until it recognizes the initiation codon AUG, followed
by the 60S large ribosomal subunit binding to form the 80S initiation
complex, which is competent to enter the elongation cycle.[6,7]Under normal cellular conditions, eIF4F complex is limited
as eIF4E
is secluded from eIF4G by binding to hypophosphorylated eIF4E binding
proteins (4E-BP). Stimulation of the phosphatidylinositol 3-kinase/AKT/mTOR
pathway leads to hierarchical 4E-BP phosphorylation, dislodging hyperphosphorylated
4E-BP from eIF4E and enabling assembly of eIF4F complex. Because both
the 4E-BPs and eIF4G share the same binding motif on eIF4E,[8−10] the former can function as an endogenous inhibitor of cap-dependent
translation initiation. As such, ectopic overexpression of 4E-BP can
inhibit cap-dependent protein synthesis, inhibit tumor growth, and
revert the malignant phenotype of eIF4E-overexpressing cancer cells.eIF4F complex assembly is rate limiting for translation initiation
and is predominantly dependent on the availability of eIF4E. Although
eIF4F complex formation increases the translation of all cap-dependent
mRNAs and thereby increases global protein synthesis rate, mRNAs vary
widely in their inherent “translatability”, that is,
primarily dictated by the length and structure of their 5′-UTRs.
mRNAs with long and structurally complex 5′-UTRs (i.e., “weak”
mRNAs) are most sensitive to restrictive abundance of eIF4E and therefore
to the limited availability of the eIF4F complex. These “weak”
mRNAs, which encode proteins that play important roles in cell growth,
proliferation, and apoptosis,[11,12] are poorly translated
when eIF4F complex is scarce, due to inefficient unwinding of “weak”
mRNA and subsequently preventing ribosome loading. In contrast, most
mRNAs that are characterized by relatively short, unstructured 5′UTRs,
the so-called “strong” mRNAs, express housekeeping proteins
such as β-actin, continue to be efficiently scanned to achieve
robust initiation codon recognition, effective ribosome loading, and
efficient translation even when eIF4F complex levels are limiting.[13]Dysregulated eIF4E-dependent translational
control is implicated
in the pathobiology of human disorders including autism,[14] fragile X syndrome,[15] tuberous sclerosis,[16] and some cancers.[17] eIF4E function is particularly critical for
the expression of a wide array of proteins that contribute to all
aspects of malignancy, including growth factors such as c-myc and
cyclin D1, angiogenesis factors such as VEGF and FGF-2, and antiapoptotic
proteins such as survivin and Bcl-2.[13] Inhibition
of either eIF4E expression by antisense RNA or the eIF4E/eIF4G interaction
by overexpression of 4E-BPs reverses the malignant phenotype in vitro
and in vivo.[18] Hence, disrupting the formation
of eIF4F complex will retard translation initiation in general and
in particular translation initiation of “weak” mRNAs
that encode a wide array of proteins involved in pathophysiological
processes, including pro-oncogenes, growth factors, cell cycle regulators,
and transcription factors, will yield powerful molecular probes and
may lead to novel drug candidates.[19−21]We have previously
reported the discovery of (2-(2-(4-(3,4-dichlorophenyl)thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
acid) (1), the eIF4E/eIF4G inhibitor-1 (4EGI-1), which
inhibits protein–protein interaction.[22] The high throughput screening (HTS) campaign of small molecule libraries
employed a cell free fluorescence polarization assay (FP). In vitro, 1 inhibits expression of regulatory proteins such as cyclins
D1 and E, C-myc, and Bcl-2 without affecting the expression of housekeeping
proteins such as actin and α-tubulin and enhances the dissociation
of eIF4G from eIF4E. Moreover, we reported significantly lower IC50 for the inhibition of proliferation of transformed malignant
Ph+, which is transformed by the bcr-abl, cells than that for nonmalignant nontransformed Ph– cells
by 1.[22] Similarly, Tamburini
et al. reported that 1 dramatically reduces the clonogenic
growth of AML progenitors with a moderate impairment of normal CD34+
hematopoietic progenitor cologenicity.[23] Together, these studies support the proposition that inhibition
of cap-dependent translation initiation will affect predominantly
cells whose growth is fast or unregulated rather than normal cells.[8] In vivo, it effectively inhibits xenograft tumor
growth in a mouse model of humancancer.[24] Moreover, 1 proved to be an important molecular probe
in understanding the role of eIF4F in memory formation and consolidation,[25] autism spectrum disorders,[26] and viral infection.[27]Titration of GB1-eIF4E, a fusion protein tagged with a solubility
enhancing domain, with 1 and measuring the 15N-HSQC spectrum suggests that it is binding to residues present on
the eIF4G-binding surface of eIF4E.[22] In
the absence of high resolution structure of the complex of 1 with eIF4E we carried out extensive structure–activity relationship
studies to identify the essential pharmacophore and understand the
structural latitude presented by this prototypical inhibitor of eIF4E/eIF4G
interaction.[28,29] Structural rigidification that
introduces conformational constraint around rotatable bonds was practiced
advantageously in many systems and was reported to contribute to higher
specificity and potency, greater metabolic stability, and improved
bioavailability.[30−36]In light of the importance of the phenyl substitution on position
4 of the thiazolidine ring, we sought to delineate the spatial relationship
between these two aromatic moieties by restricting the rotation around
the bond connecting the two rings. Ring closure between the 1- or
6-position of the 3,4-dichlorophenyl ring (C) and the
5-position of the thiazolidine ring (B) in 1 will generate nearly coplanar, condensed, and rigid tricyclic systems
that are formally formed by rotamers representing dihedral angles
of 0° and 180° around the bond connecting the 4-thiazolyl
and the phenyl ring (Scheme 1, structures type
P1 and type P2). Specifically, the resultant rigid tricyclic scaffolds
generated by bridging position 5 of the thiazolidine with the ortho position of the phenyl ring (substituting position
4 of the same thiazolidine ring) via one of the following linkers,
ethylene, methylene oxide, methylenesulfide, methylenesulfoxide, and
methylenesulfone, will fuse the thiazolidine ring to 3,4-dihydrotetralin,
chromene, thiachromene, oxothiachromene, and thiodioxochromene, respectively.
Evidently, these fused tricyclic scaffolds are found in many biological
active compounds. For example: 4,5-dihydronaphtho[1,2-d]thiazole scaffold is found in a ligand that has significant 5-HT3
receptor affinity[37] and in ligands that
act as allosteric enhancers of A1 adenosine receptors;[38] 4H-chromeno[4,3-d]thiazole scaffold is present in some antibacterial agents;[39] 4H-thiochromeno[4,3-d]thiazole scaffold has been reported to constitute agents
with antimicrobial, analgesic, anti-inflammatory, and anesthetic activities,[40,41] and 4H-sulfoxo- and 4H-sulfonochromeno[4,3-d]thiazole scaffolds constitute some antifungal agents.[42]
Scheme 1
Strategy for the Rigidification of 1
With the intention
to characterize the impact of partial molecular
rigidification, we connected rings B and C forming either the 3,4-dihydrotetralin or chromene ring systems.
We have focused our study on the previously reported prototypic 1 and kept the o-NO2-substitution
on ring A and the dichloro-substitution on ring C. In addition, we substituted ring C with the
more polar dimethoxy-substitutions. Our study reported herein explored
the role of conformational rigidification of the 4-[3′,4′-dichlorophenyl]thiazolyl
part of 1 on its potency to inhibit eIF4E/eIF4G interaction
employing a fluorescence polarization assay and proliferation of humancancer cells.
Results and Discussion
Chemistry
Conceptually,
there are two possible modes
for connecting rings B and C of 1 by forming a new six-membered ring that is part of the fused tricyclic
system. In the first mode (P1), position C5 of the 2-thiazolyl (ring B) and the position C2′ of 3′,4′-dichlorphenyl
(ring C) are connected to form the new six-membered ring
(Scheme 1, system I). In the second
mode (P2), the same position of the 2-thiazolyl (ring B) is connected to C6′ of 3′,4′-dichlorphenyl
(ring C), again forming another variant of a fused tricyclic
system (Scheme 1, system II).
In addition, the availability of (E)- and (Z)-configurations around the carbimino bond of the hydrazono
function enables formation of two geometrical isomers for each of
the two cyclization modes described above. While the mode of cyclization
is dictated by the choice of starting material, isomers (E) and (Z) are generated simultaneously as a mixture
that requires chromatographic separation. The purity of the final
rigidified 1 mimetic was established by analytical RP-HPLC
and exceeded 95%, and their structural integrity and identity was
established by 1H- and 13C NMR and HR-MS.Our stepwise synthetic strategy followed the general pathway used
in the synthesis of (E/Z)-1 (Scheme 2).[43] Accordingly, α-bromination of the bicyclic ketone 2 generated the corresponding phenacyl bromide 3. Reaction
of the bromide 3 with the thiosemicarbazide led to the
formation of the 2-hydrazinyl-thiazole 4 that was then
condensed with the o-nitro-phenylpyruvic acid to
generate the partially rigidified (E/Z)-1 mimetic 5 (Scheme 2).
Scheme 2
Synthetic Strategy of Partially Rigidified 1 Mimetic
Synthesis of the 4,5-dihydronaphtho[1,2-d]thiazolyl-containing 1 mimetic 13a and 13b is outlined
in Scheme 3. Friedel–Crafts acylation
of o-dichlorobenzene, 6, with succinic
anhydride in the presence of AlCl3 or n-BuLi[44] led to the formation of the respective
isomers 4-(3,4-dichlorophenyl)- and 4-(2,3-dichlorophenyl)-4-oxobutanoic
acid (7a and 7b, respectively). Clemmensen
reduction of the ketones[45,46] was followed by intramolecular
polyphosphoric acid-mediated acylation,[47] generating the corresponding α-tetralone derivatives 9a(45) and 9b(46) that were then α-brominated to the corresponding
2-bromo-6,7-dichloro-3,4-dihydronaphthalen-1(2H)-one, 10a,[46,48] and 2-bromo-5,6-dichloro-3,4-dihydronaphthalen-1(2H)-one, 10b. Hantzsch-type reaction[49] between thiosemicabazide and these α-bromoketones
generated predominantly the corresponding hydrazines11a and 11b in moderate yields side-by-side with lesser
amounts of the side-product amines12a and 12b. Finally, condensation between 4,5-dihydronaphtho[1,2-d]thiazol-2-yl)hydrazines, 11a and 11b,
with 2-(o-nitrophenyl)pyruvic acid in the presence
of 5% acetic acid afforded the isomeric mixture of the desired rigidified 1 mimetic, (E/Z)-13a (type P1) and (E/Z)-13b (type P2) in 35–40% yield. The individual (E)- and (Z)-isomers were separated by reverse phase
column chromatography. In a separate reaction, when a mixture of 11a and 12a treated with 2-(o-nitrophenyl)pyruvic acid under similar reaction conditions only
the formation (E/Z)-13a was observed with the unreacted diazine 12a, presumably
due to its weak nucleophilicity relative to 11a. And
also considering the tedious chromatographic process required for
the isolation of the hydrazine (11a) and the thiadiazine
(12a), it was decided to use the crude amine mixtures
in the syntheses of other analogical derivatives of 1 (compounds (E/Z)-23a–b, (E/Z)-29a–b, (E/Z)-32a–b, (E/Z)-35a–b, and (E/Z)-46a–c, Schemes 4–7). The respective yields of the hydrazines were based on the LCMS
analyses of the mixtures.
Scheme 3
Synthesis of 4,5-Dihydronaphtho[1,2-d]thiazolyl-Containing 1 Mimetic
Synthesis of 4,5-Dihydronaphtho[1,2-d]thiazolyl-Containing 1 Mimetic
(i) Succinic anhydride, AlCl3, 65 °C, 80%; (ii) succinic anhydride, n-BuLi, −78 C, 30%; (iii) Zn(Hg), concd HCl, toluene, reflux,
36 h, 30–60%; (iv) polyphosphoric acid, 130 °C, 12 h,
30%; (v) Br2, ether, 30 min, 88–90%; (vi) thiosemicarbazide,
dioxane, 48 h, 40–50%; (vii) 2-(o-nitrophenyl)pyruvic
acid, 5% AcOH in EtOH (1:2, v/v), reflux, 1 h, 38–45%.Synthesis of rigidified oxymethylene-bridged 1 mimetic
(E/Z)-23a (type P1)
and (E/Z)-23b (type
P2) started with O-alkylation of 2,3-dichloro- and
3,4-dichlorophenol, respectively, with β-propiolacone in the
presence of sodium hydroxide or sodium hydride. This was followed
by acid catalyzed cyclization of the 3-phenoxypropionic acids 15 and 18 into the corresponding chroman-4-one
derivatives 16, 19, and 20.[50] While the cyclization of 3-(2,3-dichlorophenoxy)propanoic
acid (15) in the presence of either HFliq or
Eaton’s reagent[51] afforded 7,8-dichlorochroman-4-one
(16) in good yield, cyclization of 3-(3,4-dichlorophenoxy)propanoic
acid (18) in the presence of HFliq afforded
7,8-dichlorochroman-4-one (19) but in the presence of
Eaton’s reagent it yielded 5,6-dichlorochroman-4-one (20). Because of excessive steric hindrance considerations,
we shelved ketone 20 and carried α-bromination
of 16 and 19 successfully by employing pyridinium
bromide perbromide (PBPB).[52] In contrast,
attempt to use Br2 under conditions similar to those used
for the preparation of 10a and 10b generated
multiple products and mixtures difficult to resolve. Conversion of
the α-bromo ketones21a and 21b followed
to the hydrazines22a and 22b and the subsequent
condensation with 2-(o-nitrophenyl)pyruvic acid followed
the same procedures as described above for the 4,5-dihydronaphtho[1,2-d]thiazolyl-containing 1 mimetic 13a and 13b and generated the anticipated oxymethylene-bridged 1 mimetic (E/Z)-23a and (E/Z)-23b (Scheme 4).
Synthesis of Chromene
Derived 1 Mimetic
(i) β-Propiolactone,
NaH, DMF, 100 °C, 42%; (ii) β-propiolactone, NaOH, H2O, 100 °C, 50%; (iii) HFliq, −78 °C,
12 h, 76%; (iv) Eaton’s Reagent, 70 °C, 75%; (v) pyridinium
bromide perbromide, CHCl3–EtOH, 50 °C, 74–76%;
(vi) thiosemicarbazide, dioxane, 40–50%; (vii) 2-(o-nitrophenyl)pyruvic acid, 5% AcOH–ethanol (1:2, v/v), reflux,
1 h, 35–40%.As a logical extension
of oxymethylene to thiomethylene rigidified
analogues of 1, the synthesis of a set of rigidified
mimetic of 1, 29a, and 29b was
performed. The synthetic protocol started from the S-alkylation of 2,3- and 3,4-dichlorothiophenol with 3-bromopropionic
acid in the presence of sodium hydroxide at elevated temperature,
yielding respective thioaryl propionic acids, 25a and 25b, which on H2SO4 cyclization afforded
4-thiochroman-1-ones, 26a and 26b, in excellent
yield.[53] The 2-bromo-4-thiochroman-4-ones,[54]27a and 27b, obtained
from the thiachromanones25a and 25b, respectively,
gave thiomethylene rigidified mimetic of 1, (E/Z)-29a and (E/Z)-29b in 35–40% yields (Scheme 5) by following the general
synthetic steps described in Scheme 2.
(i) 3-Bromopropionic acid,
NaOH, 100 °C, 88–94%; (ii) concd H2SO4, −10 °C–RT, 90%; (iii) Br2, 60–69%;
(iv) thiosemicarbazide, dioxane, 40–50%; (vi) 2-(o-nitrophenyl)pyruvic acid, 5% AcOH–ethanol (1:2, v/v), reflux,
1 h, 35–40%.With a view to functionalize
the thiochromene derived mimetic on
the sulfur atom, α-bromo thiochromenes, 27a and 27b, were subjected to oxidation at different conditions[55] to afford 33a and 33b, which on treatment with thiosemicarbazide followed by 2-(o-nitrophenyl)pyruvic acid gave the methylene sulfoxide
and methylene sulfone bridged 1 mimetic (E/Z)-32a, (E/Z)-32b, (E/Z)-35a, and (E/Z)-35b, respectively (Scheme 6).
Scheme 6
Synthesis of Methylene Sulfoxide and Methylene
Sulfone Derived 1 Mimetic
Synthesis of Methylene Sulfoxide and Methylene
Sulfone Derived 1 Mimetic
(i) m-Chloroperbenzoic
acid (1 equiv), CHCl3, RT, 70–76%; (ii) m-chloroperbenzoic acid (4 equiv), CHCl3, reflux,
72–83%; (iii) thiosemicarbazide, dioxane, 40–50%; (iv)
2-(o-nitrophenyl)pyruvic acid, acetic acid, 2 h,
RT, 40–42%; (v) 2-(o-nitrophenyl)pyruvic acid,
acetic acid, 30 min, RT, 35–45%.To
examine the effect of a dimethoxy substituent on the ring A replacing a dichloro substituent, we synthesized three dimethoxy
substituted rigidified analogues of 1 starting from the
respective tetralone and chromanones. Thus, 6,7-dimethoxy-4-chromanone
(43a)[56−58] afforded (E/Z)-46a, while 7,8-dimethoxy-4-chromanone (43b)[59,60] and 6,7-dimethoxy tetralone (43c) obtained from 4-oxo-4-(3,4-dimethoxyphenyl)butanoic
acid (39)[61] yielded (E/Z)-46b and (E/Z)-46c, respectively, in analogy to
Scheme 2 (Scheme 7).
Synthesis of Dimethoxy Derivatives of Tetralin
and Chromene Based 1 Mimetic
Our previously
described fluorescence polarization
(FP) assay was used to measure the binding efficiency of new 1 mimetic to eIF4E by competing with a fluorogenic eIF4G derived
peptide containing the conserved eIF4E-binding motif (KRYDREFLLGF).[22] Displacement of the Nα-fluorescein
tagged eIF4G-drived peptide by a competing ligand causes a measurable
decrease in FP. The nontagged version of the same eIF4G-derived peptide
and DMSO were used as positive and negative controls, respectively.
The binding affinity of the new rigidified mimetic of 1 in which the 3,4-dichlorphenylthiazol-2-yl system was replaced with
either 4,5-dihydronaphthol[1,2-d]thiazol-3-yl or
4H-chromeno[4,3-d]thiazol-3-yl moieties
or 4H-thiochromeno[4,3-d]thiazol-3-yl
or 4H-sulfoxo- and sulfonochromeno[4,3-d]thiazol-3-yl moieties was tested in the FP assay and were compared
to that of (Z)-isomer of parent 1. The
results were presented as a ratio between the IC50 of (Z)-1; the concentration of (Z)-1 needed to displace 50% of the fluorescent-tagged
peptide, and the IC50 of the new 1 analogue,
and the concentration of the new analogue needed to displace 50% of
the fluorescent-tagged peptide when measured in the same 384-well
plate (Figure 1).
Figure 1
Dose Dependent Inhibition of eIF4E/eIF4G interaction
by rigidified
1 mimetic.
Dose Dependent Inhibition of eIF4E/eIF4G interaction
by rigidified
1 mimetic.The simplest of the rigidified 1 mimetic, (E/Z)-13a, containing an ethylene
bridge between C-6′-(2′,3′-dichlorophenyl) ring
(C) and C-5 of thiazolyl ring (B), and (E/Z)-13b, containing an ethylene
bridge between C-2′-(4′,5′-dichlorophenyl) ring
(C) and C-5 of thiazolyl ring (B), display
a 1.5- to 2-fold increase in binding affinity as compared to parent
(Z)-1 (entries 2–5, Table 1). Linking thiazolyl ring B with the
phenyl ring C via an oxymethylene (entries 6–9,
Table 1) contribute to further increase in
binding affinity, reaching in (Z)-23a a 3-fold increase (IC50 = 15.5 μM) relative to
the parent (Z)-1. However, rigidification
via bridges containing thiomethylene (entries 10–13, Table 1), methylenesulfoxide (entries 14–17, Table 1), or methylenesulfone (entries 18–21, Table 1) reverse the trend and do not contribute to binding
affinity enhancement relative to the nonrigidified parent 1. Interestingly, the most potent binders to eIF4E in this series
are 1 mimics containing the dihydronaphtho- and the chromeno-ring
systems carrying dimethoxy substituents (IC50 = 10.5 μM
for both (E)-46c and (E)-46a, respectively). A plausible explanation for the
decrease in binding affinity of the polar methylenesulfoxide- and
methylenesulfone-containing 1 mimetic relative to the
less polar thiomethylene- and oxymethylene-containing analogues is
the marked decrease in the calculated partition coefficient (CLogP)
associated with the increased polarity. Comparison of CLogPs of (Z)-isomers of 13a (5.21), 23a (4.65), 29a (4.96), 32a (3.15), and 35a (2.88)
that are constrained by the respective ethylene-, oxymethylene-, thiomethylene-,
methylenesolfoxide-, and methylenesulfone-bridges supports the above-mentioned
proposition.
Table 1
Binding of the 1 Rigidified
Mimetic to eIF4E as Measured by Fluorescence Polarization Assay (FP)
and Their Potency to Inhibit Cancer Cells Proliferation As Measured
by Sulforhodamine B (SRB) Assay
SRB assay
IC50 (μM)
entry
compd
X
R1
R2
R3
FP assay
IC50 (μM)
CRL-2813
CRL-2351
1
(Z)-1
Cl
Cl
H
43.5 ± 1.52
15.3 ± 2.5
11.6 ± 0.2
2
(E)-13a
CH2
H
Cl
Cl
21.5 ± 0.70
3.8 ± 0.3
4.1 ± 0.7
3
(Z)-13a
CH2
H
Cl
Cl
34 ± 4.24
12.0 ± 0.6
>20 (NA)a
4
(E)-13b
CH2
Cl
Cl
H
32 ± 1.41
3.6 ± 0.3
4.4 ± 0.6
5
(Z)-13b
CH2
Cl
Cl
H
43.5 ± 2.12
10.6 ± 1.4
11.2 ± 0.6
6
(E)-23a
O
Cl
Cl
H
25 ± 1.41
5.8 ± 0.0
16.6 ± 4.2
7
(Z)-23a
O
Cl
Cl
H
15.5 ± 0.70
12.3 ± 0.4
>20 (NA)
8
(E)-23b
O
H
Cl
Cl
18.5 ± 0.70
3.1 ± 0.1
5.2 ± 0.6
9
(Z)-23b
O
H
Cl
Cl
27 ± 1.41
8.7 ± 4.1
15.4 ± 2.8
10
(E)-29a
S
H
Cl
Cl
15.5 ± 0.70
5.1 ± 0.1
17.6 ± 2.8
11
(Z)-29a
S
H
Cl
Cl
14 ± 0.0
10.5 ± 0.1
17.7 ± 2.7
12
(E)-29b
S
Cl
Cl
H
28 ± 1.41
4.5 ± 0.1
9.1 ± 1.3
13
(Z)-29b
S
Cl
Cl
H
11.5 ± 0.70
7.0 ± 2.2
16.7 ± 0.1
14
(E)-32a
SO
H
Cl
Cl
30.5 ± 2.12
7.5 ± 0.7
>20 (NA)
15
(Z)-32a
SO
H
Cl
Cl
30 ± 1.41
4.1 ± 0.1
10.3 ± 0.4
16
(E)-32b
SO
Cl
Cl
H
48.5 ± 6.36
11.2 ± 1.7
>20 (NA)
17
(Z)-32b
SO
Cl
Cl
H
32.5 ± 2.12
11.4 ± 0.3
19.8 ± 0.3
18
(E)-35a
SO2
H
Cl
Cl
40.5 ± 6.36
>20 (NA)
>20
(NA)
19
(Z)-35a
SO2
H
Cl
Cl
39 ± 5.65
>20 (NA)
>20
(NA)
20
(E)-35b
SO2
Cl
Cl
H
49 ± 2.82
>20 (NA)
>20
(NA)
21
(Z)-35b
SO2
Cl
Cl
H
49 ± 2.82
>20 (NA)
>20
(NA)
22
(E)-46c
CH2
H
OMe
OMe
10.5 ± 0.70
12.1 ± 0.7
>20 (NA)
23
(Z)-46c
CH2
H
OMe
OMe
45 ± 2.82
>20 (NA)
>20
(NA)
24
(E)-46b
O
OMe
OMe
H
16.5 ± 3.53
>20 (NA)
>20
(NA)
25
(Z)-46b
O
OMe
OMe
H
55.5 ± 4.94
>20 (NA)
>20
(NA)
26
(E)-46a
O
H
OMe
OMe
10.5 ± 0.70
>20 (NA)
>20
(NA)
27
(Z)-46a
O
H
OMe
OMe
51.5 ± 4.94
>20 (NA)
>20
(NA)
NA: not active.
NA: not active.Evidently, regardless of the substitution on ring C (dichloro or dimethoxy), we do not observe a significant
difference
in binding affinity trends between type P1 (a series)
and type P2 (b series) for the rigidified 1 mimetic (e.g., cf. IC50 in the FP assay of (E)-13a and (Z)-13a with
(E)-13b and (Z)-13b, 21.5 and 34 with 32 and 43.5 μM, respectively,
or (E)-46a and (Z)-46a with (E)-46b and (Z)-46b, 10.5, 30, and 51.5 with 16.5 and 55.5
μM, respectively).The inhibition of cell proliferation
data obtained in the SRB (sulforhodamine
B) cell proliferation assay with humancancer cell lines CRL-2351
breast and CRL-2813 melanoma indicated that the rigidified 1-derived mimetic inhibited cell proliferation with IC50 values around 1–20 μM. With few exceptions that might
relate to solubility and/or cell penetration issues, almost all compounds
displaying higher affinity to eIF4E than (Z)-1 in the FP assay were also more potent inhibitors in the
SRB cell proliferation assay, suggesting that the compounds inhibit
cell proliferation through inhibition of translation initiation. In
comparison with the parent nonconstrained 1 that inhibits
equally the breast cancer and melanoma cells, the rigidified 1 mimetic compounds were, in general, more potent in inhibiting
proliferation of CRL-2813 melanoma cells vs the CRL-2351 breast cancer
cells. While (Z)-13a, (Z)-23a, (E)-32a, and (E)-32b (IC50= 12.0, 12.3, 7.5, and
11.2 μM, respectively) were slightly more potent than (Z)-1 (IC50= 15.3 μM) in inhibiting
proliferation of the melanoma cells, they did not inhibit the proliferation
of breast cancer cells up to 20 μM. Interestingly, the more
polar rigidified 1 mimetic compounds, those that are
composed of 4H-[1]benzothiopyrano[4,3-d]thiazole, 5,5-dioxide (35a and 35b, CLogP
= 2.88), and dimethoxy-substituted dihydronaphtho[1,2-d]thiazole (Z)-46c, CLogP = 3.63) and
4H-chromeno[4,3-d]thiazole (46a and 46b, CLogP = 2.98), in spite of having
inhibitory binding affinity comparable to that of (Z)-1 (CLogP = 4.76) were devoid of cell proliferation
inhibitory activity up to concentrations of 20 μM.Evidently,
we think of the cancer cell proliferation inhibitory
activities as reporting of global activity that combine on- and off-target
effects. The high sensitivity of the adherent humanmelanomaCRL-2813
relative to the humanbreast cancerCRL-2351 to inhibition of proliferation
by the rigidified 1 mimetic compounds may be attributed
to the presence of a BRAF mutation that makes them
significantly more dependent on highly efficient cap-dependent translation
initiation.[62]
Disruption of eIF4E/eIF4G
Interaction
We chose (E)-29a, a rigidified 1 mimetic
that showed enhanced potency in the FP-assay and the SRB-cell proliferation
assay, and (E)-35b, another 1 mimetic with very low activity in both assays, and tested their
ability to disrupt the eIF4E/eIF4G complex formation in CRL-2813 melanoma
cells (Figure 2). The state of association
of eIF4E with eIF4G and 4E-BP1 was determined by pull-down experiment
on m7GDP agarose resin. This demonstrated that full-length
eIF4G is displaced from eIF4E by (E)-29a that was not the case with the FP-less active derivative (E)-35b, in which no effect was observed. The
disruption of the eIF4E/eIF4G, however, increased the 4E-BP1 binding
to eIF4E, which is consistent with our previous finding that 1 inhibits eIF4E/eIF4G interaction independently of 4E-BP1
binding to eIF4E.[24] We speculated that
this increase in the amount of eIF4E/4E-BP1 complex is likely due
to the dissociation of eIF4G that exposes of a larger 4E-BP1 binding
footprint that is present on eIF4E and is partially obscured by the
bound eIF4G.[22]
Figure 2
eIF4F complex formation
disruption by (E)-29a: (a) (E)-29a displaces eIF4G
from eIF4E and enhances 4E-BP1 binding in melanoma CRL-2813 cell lysate.
After incubation of CRL-2813 cells with 30 μM of each compound
for 3 h, the cells lysate was then used. A cap-affinity chromatography
and SDS-PAGE immunoblotting were used to detect eIF4E, eIF4G, and
4E-BP1. The eIF4E lanes shown come from the same gel and Western blot.
(b) Quantitative analysis of the effect of (E)-29a and (E)-35b on complex protein
levels relative to eIF4E.
eIF4F complex formation
disruption by (E)-29a: (a) (E)-29a displaces eIF4G
from eIF4E and enhances 4E-BP1 binding in melanomaCRL-2813 cell lysate.
After incubation of CRL-2813 cells with 30 μM of each compound
for 3 h, the cells lysate was then used. A cap-affinity chromatography
and SDS-PAGE immunoblotting were used to detect eIF4E, eIF4G, and
4E-BP1. The eIF4E lanes shown come from the same gel and Western blot.
(b) Quantitative analysis of the effect of (E)-29a and (E)-35b on complex protein
levels relative to eIF4E.
Conclusions
In an effort to optimize 1, the hit compound that
was found to inhibit eIF4E/eIF4G protein–protein interaction
and translation initiation both in vitro and in vivo, as a molecular
probe and potential drug candidate, we focused on developing a rigidified 1 mimetic. Rigidification of the 2-(4-(3,4-dichlorophenyl)thiazol-2-yl)
moiety by introduction of a ethylene, methylene oxide, methylenesulfide,
methylenesulfoxide, or methylenesulfone bridges locking condensed
tricyclic systems yielded some very potent 1 mimics.
One of these is (E)-29a, which carries
a methylenesulfide bridge, is 3-fold more potent than the parent 1 in competing for the binding to eIF4E in the cell-free FP
assay (Figure 1) with an IC50 =
15.5 μM, disrupts very effectively eIF4E/eIF4G protein–protein
interaction and concomitantly increases very effectively binding of
4E-BP1 to eIF4E (Figure 2), and last but not
least is a potent inhibitor of humanmelanomaCRL-2813 cells proliferation
IC50 = 5.1 μM (Table 1). Taken
together, these results suggest that the binding site on eIF4E for
the 2-(4-(3,4-dichlorophenyl)thiazol-2-yl) moiety in 1 accommodates very nicely the fused nearly coplanar tricyclic system,
which may mimic very closely a rotamer population in 1 that binds to the macromolecular target. Recently, NMR mapping of
a solution of N-terminal fused eIF4E and 1 and high resolution
X-ray analysis of co-crystal structures of eIF4E and 1 or some of its analogues suggest that dissociation of eIF4E–eIF4G
complex in the presence of these inhibitors is through an allosteric
mechanism (unpublished data). It is very likely that the similar activity
profiles of 1 and the rigidified fused tricyclic 1 mimetic reported here strongly suggests that the latter
also share a similar molecular mechanism. For now, we conclude that
the orientation of the phenyl in position 4 relative to the thiazolidine
ring depends on the nature of the bridge in the fused tricyclic system,
the substituents on that phenyl ring, and interplay between the former
two and the configuration around the hydrazone function. Our ongoing
efforts will continue to look at optimization through rigidification
modes introducing conformational and configurational constraints to
develop novel 1 mimetics as effective molecular probes.
We are currently utilizing these optimized 1 mimetics
for the direct confirmation of their allosteric mechanism of action.
Experimental Section
General
All the starting materials were obtained from
commercial sources and used as purchased. Chromatography solvents
were HPLC grade and were used without further purification. Thin layer
chromatography (TLC) analysis was performed using Merck silica gel
60 F-254 thin layer plates. LC-MS analyses were performed on Waters
2695 separator module with (APCI mode) (XTerra C8 30 mm
× 100 mm column) micromass ZQ employing a flow rate of 0.5 mL/min
and a solvent system that includes A, 0.1% v/v formic acid in water,
and B, 0.1% v/v formic acid in acetonitrile. The scan range was m/z 100–1000. HRMS analyses were
performed on Agilent Technologies, 6120 time-of-flight-LC/MS instrument
employing a linear gradient of A, 0.1% v/v FA in water, and B, 0.1%
v/v TFA in acetonitrile. Melting points were measured in open Pyrex
capillaries in MEL TEMP “Electronthermal” apparatus
and are uncorrected. The purity of tested compounds was >95% as
determined
by RP-HPLC on a C18 Xbridge column (4.6 mm × 100 mm, 1 mL/min)
with effluents monitored at 254 nm in Waters 2695 separator module.
Solvent system employed included a linear gradient of A, 0.1% v/v
TFA in water, and B, 0.1% v/v TFA in acetonitrile. NMR spectra were
recorded on a Varian 400 or 500 MHz spectrometers. The signal of the
deuterated solvent was used as internal reference. Chemical shifts
(δ) are given in ppm and are referenced to residual not fully
deuterated solvent signal. Coupling constants (J)
are given in Hz.
Synthesis of 4-(3,4-Dichlorophenyl-1-oxo-butyric
Acid (7a)
AlCl3 (1.99 g, 15 mmol)
was added
to a solution of succinic anhydride (5 g, 50 mmol) in 1,2-dichlorobenzene
(44.1 g, 3 mmol) at RT. The reaction mixture was heated to 60 °C
for 2.5 h and then inverse quenched onto cold water (120 mL), maintaining
the temperature below 50 °C, and stirred for 30 min. Then hexane
(60 mL) was added, and the stirring continued for 2 h to afford 7a as an off-white solid, which was filtered and dried under
vacuum.
7a
White
powder, yield 5.92 g (80%); mp
181–182 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 2.54–2.57 (t, 2H),
3.24 (t, 2H), 7.79 (d, J = 8 Hz, 1H), 7.90–7.93
(dd, J = 8 and 4 Hz, 1H), 8.12 (d, J =J = 4 Hz, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 28.4, 33.9, 128.6,
130.4, 131.7, 136.6, 137.2, 174.3, 197.5. Purity of 100% as determined
by RP-HPLC, tR = 13.55 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C10H8Cl2O3, 247.07; found, m/z = 247.01 (M
– H)−.
Synthesis of 4-(3,4-Dichlorophenyl)butyric
Acid (8a)
Pure Zn dust (98%) (2.6 g, 40 mmol)
and HgCl2, (0.18 g, 0.66 mmol) were stirred with concentrated
HCl (0.25 mL)
and water (0.5 mL) for 10 min. The aqueous solution was then syringed
out and the amalgamated zinc was suspended in a mixture of water (4
mL) and concd HCl (8 mL). To this suspension were added 7a (1.0 g, 4 mmol) followed by toluene (8 mL) and refluxed with stirring
for 36 h with the addition of concd HCl (4 mL) every 5 h. After cooling
to RT, the reaction mixture was filtered and the filtrate was extracted
with ethyl acetate (100 mL), dried over anhydrous Na2SO4, and concentrated under vacuum to give the crude butyric
acid (8a) as oil. It was then chromatographed on a silica
gel column using hexane–ethyl acetate mixture (9:1 v/v) as
eluent.
8a
White
solid, yield 0.3 g (30%), Rf 0.4 (methanol–dichloromethane,
1:9,
v/v); mp 61–63 °C. 1H NMR (CDCl3, 400 MHz) in ppm: δ 1.91–1.97 (m, 2H), 2.35–2.39
(t, 2H), 2.61–2.64 (t, 2H), 7.00–7.02 (dd, J = 8 and 4 Hz, 1H), 7.26 (d, J = 4 Hz, 1H), 7.34
(d, J = 8 Hz, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ 26.0, 33.3, 34.2, 123.2, 125.7, 128.1,
130.5, 131.8, 141.6, 179.9. Purity of 98.4% as determined by RP-HPLC, tR = 15.16 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C10H10Cl2O2, 232.98; found, m/z = 231.02 (M – H)−.
Synthesis of 6,7-Dichloro-3,4-dihydronaphthalen-1(2H)-one (9a)
Polyphosphoric acid (35
g) was heated
to melt at 120 °C for 30 min. To this was added 8a (1.2 g, 5.1 mmol) and heated further with stirring for 10 h at 130
°C. After cooling to RT, dilution with water (100 mL) and extraction
with ethyl acetate (100 mL) yielded an organic phase that was washed
with a saturated solution of NaHCO3 (50 mL), dried over
anhydrous Na2SO4, and evaporated under vacuum.
The oily residue was chromatographed on silica gel column with hexane–ethyl
acetate (98:2, v/v) to obtain 9a.
9a
White solid, yield 0.32 g (30%); mp
110–111 °C. 1H NMR (CDCl3, 500 MHz)
in ppm: δ 2.09–2.14 (m, 2H), 2.62 (t, J = 6.0 Hz, 2H), 2.89 (t, J = 6.0 Hz, 2H), 7.34 (s,
1H), 8.03 (s, 1H). 13C NMR (CDCl3, 125 MHz)
in ppm: δ 23.8, 29.0, 38.7, 129.1, 130.8, 131.5, 132.3, 137.7,
143.9, 196.3. Purity of 100% as determined by RP-HPLC, tR = 16.79 min (linear gradient system of 0–100%
of B in A for 26 min). ESI-MS calcd MW for C10H8Cl2O, 215.08; found, m/z = 214.97 [M + H]+.
Synthesis of 2-Bromo-6,7-dichloro-3,4-dihydronaphthalen-1(2H)-one (10a)
To a solution of 9a (0.1 g, 0.464 mmol) in dry diethyl ether (5 mL) was added
a solution of bromine (0.074 g, 0.464 mmol) in ether (1 mL) and stirred
at RT for 30 min. The residue obtained after the removal of the solvent
under vacuum was treated with an aqueous solution of NaHCO3 (5% w/v, 10 mL) and extracted with dichloromethane (50 mL). The
organic layer was dried over anhydrous Na2SO4, concentrated under vacuum, and chromatographed on a silica gel
column with ethyl acetate–hexane mixture (5:95, v/v) to afford
the pure bromide10a.
10a
White powder, yield 0.120 g (88%);
mp 128–130 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.83–2.88 (m, 2H), 3.22–3.29 (m,
2H), 4.69 (t, 1H), 7.40 (s, 1H), 8.12 (s, 1H). 13C NMR
(CDCl3, 100 MHz) in ppm: δ 25.4, 31.4, 49.2, 129.6,
130.5, 130.8, 132.1, 138.8, 142.3, 188.8. Purity of 98.9% as determined
by RP-HPLC, tR = 18.53 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C10H7BrCl2O, 293.97;
found, m/z = 292.75 (M –
H)−.
Synthesis 1-(7,8-Dichloro-4,5-dihydronaphtho[1,2-d]thiazol-2-yl)hydrazine (11a) and 8,9-Dichloro-5,6-dihydro-4aH-naphtho[1,2-e][1,3,4]thiadiazin-3-amine
(12a)
A solution of 10a (0.4 g,
1.36 mmol) and thiosemicarbazide (0.124 g, 1.36 mmol) in anhydrous
dioxane (20 mL) was heated to 80 °C for 1 h and then stirred
at RT for 48 h. The resulting precipitate was filtered, washed with
dioxane (10 mL), and suspended in 2 M Na2CO3 (15 mL). The pale greenish-yellow solid of 11a and 12a was filtered, washed with water, and separated by preparative
RP-HPLC using a linear gradient system of 10–50% B in A for
25 min.
11a
Off-white solid, yield 0.150 g (39%);
mp 160–162 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 2.86–2.95 (m, 4H),
7.49 (s, 1H), 7.67 (s, 1H), 9.27 (bs, 2H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 21.3, 27.8, 123.9,
129.0, 129.6, 130.5, 131.9, 132.0, 135.9. Purity of 65.5% as determined
by RP-HPLC, tR = 13.20 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C11H9Cl2N3S, 286.18; found, m/z = 285.95
[M + H]+.
12a
Off-white solid, yield 0.077 g (20%);
mp 214–216 °C. 1H NMR (DMSO-d6, 500 MHz) in ppm: δ 1.73–1.84 (m, 2H),
2.77–2.95 (m, 2H), 4.31–4.35 (m, 1H), 7.66 (s, 1H),
8.05 (s, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 25.8, 27.1, 39.6, 127.0, 129.2, 129.7,
130.5, 131.4, 141.6, 148.0, 164.4. Purity of 96.8% as determined by
RP-HPLC, tR = 12.44 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C11H9Cl2N3S, 286.18; found, m/z = 285.95
[M + H]+.
Synthesis of (E/Z)-2-(2-(7,8-Dichloro-4,5-dihydronaphtho[1,2-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic Acid
[(E/Z)-13a]
A suspension of 11a (0.186 g, 0.649 mmol) in 5% (v/v)
acetic acid (7 mL) was added to 2-(o-nitrophenyl)pyruvic
acid (0.135 g, 0.649 mmol) in ethanol (14 mL) and was heated at 90–100
°C for 1 h. The yellow precipitate that formed upon cooling to
RT was filtered, washed with water, and dried. The crude mixture containing
the two isomers, (E)-13a and (Z)-13a, was purified on a RP-C18 FCC (100 g
cartridge, flow rate = 40 mL/min) using a solvent system consisting
of A, triethylammonium bicarbonate buffer (50 mM, pH = 8.5), and B,
methanol. The purified isomers were precipitated from their respective
fractions following acidification with 10% HCl and separated by centrifugation.
Repeated washes of the pellets with 5% HCl followed by thorough washes
with water and drying under vacuum yielded the following:
(E)-13a
Yellow powder;
yield 0.06 g (20%); mp 255–256 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 2.85–2.89
(m, 2H), 2.93–2.97 (m, 2H), 4.27 (s, 2H), 7.05 (d, J = 8.0 Hz, 1H), 7.47–7.51 (m, 2H), 7.55 (s, 1H),
7.60–7.65 (m, 1H), 8.04–8.06 (m, 1H), 12.44 (bs, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm:
δ 21.3, 27.7, 29.8, 123.6, 125.7, 128.5, 129.2, 129.5, 129.7,
130.5, 131.7, 134.5, 136.0, 149.6, 166.0. Purity of 100% as determined
by RP-HPLC, tR = 8.37 min (linear gradient
system of 50–100% B in A for 20 min). HRMS(ESI) m/z calcd for C20H14Cl2N4O4S [M + H]+, 477.01128;
found 477.01929.
(Z)-13a
Yellow powder;
yield 0.055 g (18%); mp 254–255 °C. 1H NMR
(DMSO-d6, 400 MHz) in ppm: δ 2.73–2.80
(m, 2H), 2.88–2.92 (m, 2H), 4.15 (s, 2H), 7.46–7.55
(m, 3H), 7.59 (s, 1H), 7.66–7.70 (m, 1H), 8.02–8.05
(m, 1H), 12.72 (bs, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 21.2, 27.7, 36.7, 123.9, 125.2,
128.9, 129.3, 129.8, 130.4, 132.5, 133.60, 134.2, 135.9, 149.7, 164.7.
Purity of 99.2% as determined by RP-HPLC, tR = 10.79 min (linear gradient system of 50–100% B in A for
20 min). HRMS(ESI) m/z calcd for
C20H14Cl2N4O4S [M+H]+, 477.01128; found 477.01923.
Synthesis
of 4-(2,3-Dichlorophenyl)butyric Acid (7b)
A
solution of 1,2-dichlorobenzene (1.47 g, 10 mmol) in
dry THF (10 mL) was added dropwise to n-butyl lithium
(4 mL, 1.8 M in hexanes) at −78 °C under N2, and the mixture was stirred for half an hour. To the pale-yellow
reaction mixture, a solution of succinic anhydride (1.0 g, 10 mmol)
in dry THF (10 mL) was added slowly (15 min) and stirred for 1 h at
−78 °C. The reaction was quenched by water (20 mL) and
acidified with 5 N HCl. The organic phase obtained following extraction
with DCM (100 mL) was dried over anhydrous Na2SO4 and concentrated under vacuum to yield an oily residue which after
recrystallization in toluene afforded 7b.
7b
White crystals; yield
0.74 g (30%);
mp 116–118 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.81 (t, 2H), 3.20 (t, 2H), 7.25–7.29
(m, 1H), 7.34–7.36 (m, 1H), 7.53–7.55 (m, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ 28.4, 37.6,
126.9, 127.9, 132.4, 134.3, 141.4, 178.7, 200.8. Purity of 99.4% as
determined by RP-HPLC, tR = 12.76 min
(linear gradient system of 0–100% B in A for 26 min). ESI-MS
calcd MW for C10H8Cl2O3, 247.07; found, m/z = 244.96 [M + H]+.
Synthesis
of 5,6-Dichloro-3,4-dihydronaphthalen-1(2H)-one (9b)
Step A
Pure Zn dust (98%) (4.0 g,
61 mmol) and HgCl2, (0.4 g, 1.4 mmol) were stirred with
concd HCl (0.25 mL)
and water (6.6 mL) for 10 min. The aqueous solution was removed, and
the zinc amalgam was then suspended in water (2.5 mL) and concd HCl
(6 mL). The stirred suspension was treated with 7b (2.3
g, 9.3 mmol) and toluene (3.5 mL) and refluxed for 24 h with the addition
of concd HCl (2 mL) in every 6 h. The reaction mixture was cooled
to RT and filtered, and the filtrate was extracted with ethyl acetate
(100 mL). The ethyl acetate fraction was dried over anhydrous Na2SO4 and concentrated under vacuum to give 8b as white solid.
8b
White solid; yield 1.2 g (57%). Purity
of 99.2% as determined by RP-HPLC, tR =
15.01 min (linear gradient system of 0–100% B in A for 26 min).
ESI-MS calcd MW for C10H10Cl2O2, 233.09; found, m/z = 230.74 (M – H)−.
Step B
8b (1.2 g, 5.1 mmol) was added
to a polyphosphoric acid melt (35 g) at 130 °C and stirred for
10 h. The reaction mixture was cooled to RT, and water (100 mL) was
added. This mixture was extracted with ethyl acetate (100 mL) and
washed with saturated solution of NaHCO3 (50 mL). The organic
phase was dried over anhydrous Na2SO4 and concentrated
in vacuum. The oily residue was subjected to silica gel column chromatography
with hexane–ethyl acetate mixture (98:2 v/v) to obtain pure 9b.
9b
Pale-yellow solid; yield 0.32 g (30%);
mp 95–96 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.12–2.17 (m, 2H), 2.59–2.62 (t,
2H), 3.01–3.04 (t, 2H), 7.38 (d, J = 8.0 Hz,
1H), 7.86 (d, J = 8.0 Hz, 1H). 13C NMR
(CDCl3, 100 MHz) in ppm: δ 22.3, 28.1, 38.0, 126.4,
128.4, 128.5, 132.6, 138.5, 143.9, 196.7. Purity of 98.3% as determined
by RP-HPLC, tR = 16.90 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C10H8Cl2O, 215.08;
found, m/z = 214.91 [M + H]+.
Synthesis of 2-Bromo-5,6-dichloro-3,4-dihydronaphthalen-1(2H)-one (10b)
Synthesis of 10b followed the identical procedure as described for 10a.
10b
White
powder; yield 0.13 g (90%);
mp 102–103 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.49–2.59 (m, 2H), 3.16–3.19 (m,
2H), 4.67–4.69 (m, 1H), 7.47 (d, J = 8.0 Hz,
1H), 7.95 (d, J = 8.0 Hz, 1H). 13C NMR
(CDCl3, 100 MHz) in ppm: δ 24.9, 30.6, 48.6, 127.7,
129.0, 132.5, 139.5, 142.5, 189.3. Purity of 98.4% as determined by
RP-HPLC, tR = 18.58 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C10H7BrCl2O, 293.37;
found, m/z = 294.84 (M + H)+.
Synthesis of 1-(8,9-Dichloro-4,5-dihydronaphtho[1,2-d]thiazol-2-yl)hydrazine (11b) and 9,10-Dichloro-5,6-dihydro-4aH-naphtho[1,2-e][1,3,4]thiadiazin-3-amine
(12b)
Synthesis of 11b and 12b followed the identical procedure as described for 11a and 12a adjusted to 0.085 mmol scale for
the 10b and thiosemicarbazide. Both 11b and 12b were purified on a RP-C18 FCC (100 g cartridge,
flow rate = 40 mL/min) using 0–40% B in A in 2 h.
11b
Off-white solid;
yield 0.092 g (38%);
mp 197–199 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 2.88–2.95 (m, 2H),
3.09–3.15 (m, 2H), 7.53 (d, J = 8.0 Hz, 1H),
7.61 (d, J = 8.0 Hz, 1H), 9.74 (bs, 2H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ
20.9, 26.7, 122.6, 123.0, 129.1, 130.3, 131.0, 131.9, 134.9, 143.1,
168.2. Purity of 85.7% as determined by RP-HPLC, tR = 13.39 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C11H9Cl2N3S, 286.18; found, m/z = 283.94 (M – H)−.
12b
Off-white solid; yield 0.051 g (21%);
mp 213-215 °C. 1H NMR (DMSO-d6, 500 MHz) in ppm: δ 1.83–1.90 (m, 2H), 2.79–2.85
(m, 2H), 3.19–3.23 (m, 2H), 4.31–4.35 (m, 1H), 7.62
(d, J = 5.0 Hz, 1H), 7.99 (d, J =
5.0 Hz, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 25.5, 26.1, 34.0, 125.6, 129.5, 129.7,
131.6, 135.1, 140.6, 148.5. Purity of 98.7% as determined by RP-HPLC, tR = 12.7 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C11H9Cl2N3S, 286.18; found, m/z = 283.94 (M – H)−.
Synthesis of (E/Z)-2-(2-(6,7-Dichloro-4,5-dihydronaphtho[1,2-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic Acid
[(E/Z)-13b]
Synthesis of (E)-13b and (Z)-13b followed the identical procedure as described
for (E)-13a and (Z)-13a adjusted to 0.0454 mmol scale for the 11b and 2-(o-nitrophenyl)pyruvic acid.
(E)-13b
Yellow powder;
yield 0.061 g (28%); mp 254–255 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 2.92–2.97(m,
2H), 3.11–3.15 (m, 2H), 4.20 (s, 2H), 7.05–7.08 (m,
1H), 7.45–7.50 (m, 3H), 7.62–7.68 (m, 1H), 8.04–8.07
(m, 1H), 12.3 (bs, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 20.9, 26.6, 29.8, 122.2, 125.7,
128.4, 129.1, 129.5, 130.3, 131.0, 131.8, 134.5, 135.0, 149.7, 166.1.
Purity of 98.7% as determined by RP-HPLC, tR = 8.69 min (linear gradient system of 50–100% B in A for
20 min). HRMS(ESI) m/z calcd for
C20H14Cl2N4O4S [M+H]+, 477.01128; found 477.01951.
(Z)-13b
Yellow powder;
yield 0.036 g (17%); mp 261–262 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 2.84
(t, 2H), 3.06 (t, 2H), 4.15 (s, 2H), 7.44 (d, J =
5 Hz, 1H), 7.49–7.55 (m, 3H), 7.67–7.70 (m, 1H), 8.03–8.05
(m, 1H), 12.70 (bs, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 20.9, 26.5, 36.7, 122.5, 125.2,
128.8, 129.0, 130.4, 130.9, 132.5, 134.1, 134.8, 149.7, 164.7. Purity
of 100% as determined by RP-HPLC, tR =
11.39 min (linear gradient system of 50–100% B in A for 20
min). HRMS(ESI) m/z calcd for C20H14Cl2N4O4S [M+H]+, 477.01128; found 477.01961.
Synthesis
of 3-(2,3-Dichlorophenoxy)propanoic Acid (15)
Oxetan-2-one (0.72 g, 10 mmol) was added dropwise (5 min)
to a solution of 2,3-dichlorophenol, 14 (1.63 g, 10 mmol)
in 0.25 M NaOH (4 mL) and stirred overnight at 100 °C. After
cooling to RT, the reaction mixture was diluted with water (10 mL),
acidified with concd HCl (2 mL), and extracted with diethyl ether
(2 × 20 mL). The combined organic phases were washed with 10%
(w/v) NaHCO3 (100 mL). The solid 15 obtained
upon acidification of the aqueous layer to pH = 2 with concd HCl was
filtered, washed thoroughly with water, and dried under vacuum.
15
White solid; yield
1.0 g (42%); mp
147–150 °C. 1H NMR (CD3OD, 400 MHz)
in ppm: δ 2.00 (t, 2H), 4.28 (t, 2H), 6.98–7.00 (m, 1H),
7.06–7.08 (m, 1H), 7.17–7.21 (m, 1H). 13C
NMR (CD3OD, 100 MHz) in ppm: δ 33.9, 65.2, 111.6,
121.4, 122.2, 127.7, 133.3, 155.8, 173.3. Purity of 91.1% as determined
by RP-HPLC, tR = 13.74 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C9H8Cl2O3, 235.06; found, m/z = 232.84 (M
– H)−.
Synthesis of 3-(3,4-Dichlorophenoxy)propanoic
Acid (18)
A solution of 3,4-dichlorophenol, 17 (1.63
g, 10 mmol) in DMF (5 mL) was added dropwise (5 min) to a stirred
suspension of NaH (0.4 g of 60% suspension in mineral oil, 10 mmol)
in dry DMF (10 mL) and stirred for 30 min at RT and heated for 1 h
at 100 °C. Then oxetan-2-one (0.72 g, 10 mmol) was added dropwise
(5 min) and stirred overnight. After cooling to RT, it was diluted
with water (10 mL), acidified with concd HCl (2 mL), and extracted
with diethyl ether (2 × 20 mL). The combined organic phases were
extracted with 10% (w/v) NaHCO3 (100 mL). The solid 18 obtained upon acidification of the aqueous phase to pH
= 2 with (10 mL) was filtered, washed thoroughly with water, and dried
under vacuum.
18
White solid; yield 1.2 g (50%); mp
114–116 °C. 1H NMR (CD3OD, 400 MHz)
in ppm: δ 2.74 (t, 2H), 4.19 (t, 2H), 6.83–6.86 (m, 1H),
7.06 (d, J = 4.0 Hz, 1H), 7.35 (d, J = 8.0 Hz, 1H). 13C NMR (CD3OD, 100 MHz) in
ppm: δ 33.9, 64.3, 114.7, 116.3, 123.6, 130.6, 132.5, 158.2,
173.4. Purity of 88.6% as determined by RP-HPLC, tR = 14.29 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C9H8Cl2O3, 235.06; found, m/z = 232.87 (M – H)−.
Synthesis of 7,8-Dichloro-2,3-dihydrochromen-4-one
(16) and 6,7-Dichloro-2,3-dihydrochromen-4-one (19)
Method A
Warning! This reaction
was carried out in
a dedicated HF-reaction apparatus type I following strict adherence
to the manufacturer’s instruction. A suspension of 15 or 18 (0.5 g, 2.12 mmol) in liquid HF (50 mL) was allowed
to stir overnight at RT. The residue obtained after removing the HF
under vacuum was dissolved in ether (50 mL) and washed with 10% (w/v)
NaHCO3 (50 mL), and the separated organic phase was dried
over anhydrous MgSO4 to yield 16 or 19.
Method B
15 or 18 (0.5 g,
2.12 mmol) was stirred in Eaton’s Reagent (20 mL) at RT for
1 h followed by 5 h at 70 °C. The dark-red reaction mixture was
cooled to RT and quenched into ice-cold water (100 mL) and left for
30 min. The precipitate obtained from 15 was filtered
and dried under vacuum to afford 16. The reaction of 18 yielded a precipitate containing a mixture of 19 and 20, was dried under vacuum and purified by FCC
on a silica gel column employing ethyl acetate–hexane mixture
(2:8, v/v) to obtain pure 19 and 20.
16
Off-white solid;
yield 0.350 g (76%,
method A), 0.4 g (80%, method B); mp 90–92 °C. 1H NMR (CDCl3, 400 MHz) in ppm: δ 2.82 (t, 2H), 4.65
(t, 2H), 7.10 (d, J = 8.0 Hz, 1H), 7.12 (d, J = 8.0 Hz, 1H). 13C NMR (CDCl3, 100
MHz) in ppm: δ 37.2, 68.2, 120.8, 122.0, 122.9, 125.6, 140.5,
158.5, 190.2. Purity of 99.8% as determined by RP-HPLC, tR = 14.99 min (linear gradient system of 0–100%
B in A for 26 min).
19
Off-white solid; yield 0.350 g (76%,
method A), 0.125 g (27%, method B); mp 131–133 °C. 1H NMR (CDCl3, 400 MHz) in ppm: δ 2.79 (t,
2H), 4.52 (t, 2H), 7.10 (s, 1H), 7.90 (s, 1H). 13C NMR
(CDCl3, 100 MHz) in ppm: δ 37.4, 67.6, 118.0, 120.2,
120.9, 126.0, 128.3, 140.0, 160.3, 189.9. Purity of 94.6% as determined
by RP-HPLC, tR = 15.69 min (linear gradient
system of 0–100% B in A for 26 min).
20
Off-white solid;
yield 0.175 g (38%,
method B); mp 111–114 °C. 1H NMR (CDCl3, 500 MHz) in ppm: δ 2.82–2.84 (m, 2H), 4.50–4.52
(m, 2H), 6.87 (d, 1H, J = 8.5 Hz), 7.47 (d, 1H, J = 8.5 Hz). 13C NMR (CDCl3, 125 MHz)
in ppm: δ 38.8, 67.0, 118.0, 119.9, 127.7, 132.3, 135.6, 161.9,
189.1. Purity of 99.5% as determined by RP-HPLC, tR = 15.54 min (linear gradient system of 0–100%
B in A for 26 min).
Synthesis of 3-Bromo-7,8-dichloro-2,3-dihydrochromen-4-one
(21a) and 3-Bromo-6,7-dichloro-2,3-dihydrochromen-4-one
(21b)
Pyridinium bromide perbromide (0.147 g,
0.46
mmol) was added to a solution of 16 or 19 (0.1 g, 0.46 mmol) in a mixture of anhydrous ethanol and chloroform
(1:1 v/v, 10 mL) during 10 min. The reddish-brown mixture was stirred
at 50 °C for 30 min and cooled to RT. The residue obtained after
removal of solvent under vacuum was suspended in water (20 mL) and
extracted with dichloromethane (20 mL). The organic phase was washed
with 5% (w/v) NaHCO3 (20 mL) followed by water (20 mL),
dried over anhydrous Na2SO4, and concentrated
under vacuum. The crude mixture was purified by FCC using hexane–ethyl
acetate (9:1, v/v) solvent mixtures to yield pure 21a and 21b.
21a
Pale-yellow solid; yield 0.1 g (74%);
mp 134–136 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 4.62–4.64 (m, 1H), 4.75–4.80 (m,
2H), 7.20 (d, J = 8.8 Hz, 1H), 7.79 (d, J = 8.8 Hz, 1H). 13C NMR (CDCl3, 100 MHz) in
ppm: δ 44.0, 72.2, 118.2, 122.2, 123.9, 126.6, 141.5, 157.3,
184.0. Purity of 97.5% as determined by RP-HPLC, tR = 12.29 min (linear gradient system of 30–100%
B in A for 26 min). ESI-MS calcd MW for
C9H5BrCl2O2, 295.94; found, m/z = 294.84 (M – H)−.
21b
White powder; yield 0.104 g, (76%);
mp 100–107 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 4.59–4.66 (m, 3H), 7.20 (s, 1H), 7.98
(s, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ
44.3, 71.7, 118.4, 120.2, 127.1, 129.3, 141.1, 159.0, 183.5. Purity
of 98.4% as determined by RP-HPLC, tR =
11.61 min (linear gradient system of 30–100% B in A for 26
min). ESI-MS calcd MW for C9H5BrCl2O2, 295.94; found, m/z = 294.02 (M – H)−.
Synthesis of (E/Z)-2-(2-(6,7-Dichloro-4H-chromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-23a]
A solution of 21a (0.2 g, 0.67
mmol) and thiosemicarbazide (0.07 g, 0.67 mmol) in anhydrous dioxane
(20 mL) was stirred at 60 °C for 24 h. The precipitate formed
after cooling to RT was filtered, washed with dioxane (10 mL), and
suspended in 2 M Na2CO3 (20 mL). The brown product
was filtered, washed with water, and dried to yield crude 22a and used as such in the next step.
22a
Yield 0.08 g (39%). ESI-MS calcd MW for C10H7Cl2N3OS, 288.15; found, m/z = 291.94 (M + H)+.Synthesis
of (E)-23a and (Z)-23a followed the identical
procedure as described for (E)-13a and
(Z)-13a adjusted to 0.27 mmol scale
for the 22a and 2-(o-nitrophenyl)pyruvic
acid.
(E)-23a
Pale-brown fluffy
solid; yield 0.028 g (22%); mp 252–253 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ
4.27 (s, 2H), 5.55 (s, 2H), 7.05 (d, 1H, J = 4 Hz),
7.19 (d, 1H, J = 8 Hz), 7.33 (d, 1H, J = 8 Hz), 7.49–7.51 (m, 1H), 7.61–7.65 (m, 1H), 8.05
(d, 1H, J = 8 Hz),12.40 (bs, 1H). 13C
NMR (DMSO-d6, 100 MHz) in ppm: δ
29.9, 66.3, 119.8, 121.4, 123.5, 125.7, 128.5, 129.5, 131.4, 131.6,
134.5, 149.6, 150.7, 165.9. Purity of 99.5% as determined by RP-HPLC, tR = 11.60 min (linear gradient system of 30–100%
B in A for 20 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O5S [M+H]+, 478.99054; found 479.00179.
(Z)-23a
Bright-yellow
fluffy solid; yield 0.016 g (12%); mp 253–254 °C. 1H NMR (DMSO-d6, 500 MHz) in ppm:
δ 4.17 (s, 2H), 5.47 (s, 2H), 7.18–7.20 (m, 1H), 7.40
(d, 1H, J = 5 Hz), 7.51–7.56 (m, 2H), 7.68–7.71
(m, 1H), 8.05 (d, 1H, J = 5 Hz), 12.72 (bs, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm:
δ 36.8, 66.2, 119.7, 121.8, 123.5, 125.3, 128.9, 131.5, 132.4,
133.7, 134.2, 149.6, 150.6, 164.7. Purity of 100% as determined by
RP-HPLC, tR = 13.60 min (linear gradient
system of 30–100% B in A for 20 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O5S [M+H]+, 478.99054;
found 479.02029.
Synthesis of (E/Z)-2-(2-(7,8-Dichloro-4H-chromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-23b]
Synthesis of 22b followed the identical
procedure as described for 22a.
22b
Yield 0.11 g (57%).
ESI-MS calcd MW for C10H7Cl2N3OS, 288.15; found, m/z = 291.88 (M + H)+.
Step
B
Synthesis of (E)-23b and
(Z)-23b followed the identical
procedure as described for (E)-13a and
(Z)-13a adjusted to 0.48 mmol scale
for 22b and 2-(o-nitrophenyl)pyruvic
acid.
(E)-23b
Yellow powder;
yield 0.055 g (24%); mp 260–261 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 4.28
(s, 2H), 5.45 (s, 2H), 7.06 (d, J =5.0 Hz, 1H), 7.17
(s, 1H), 7.43 (s, 1H), 7.50 (t, 1H), 7.64 (t, 1H), 8.05 (d, J =10.0 Hz, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 30.0, 65.6, 118.8, 123.2,
124.2, 125.7, 128.5, 129.6, 130.6, 131.7, 134.5, 149.6, 152.9, 165.9.
Purity of 98.0% as determined by RP-HPLC, tR = 12.77 min (linear gradient system of 30–100% B in A for
20 min). HRMS(ESI) m/z calcd for
C19H12Cl2N4O5S [M+H]+, 478.99054; found 478.99796.
(Z)-23b
Yellow powder;
yield 0.037 g (16%); mp 265–266 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 4.17
(s, 2H), 5.38 (s, 2H), 7.16 (s, 1H), 7.51–7.56 (m, 3H), 7.69
(s, 1H), 8.04 (d, J =10.0 Hz, 1H). 13C
NMR (DMSO-d6, 125 MHz) in ppm: δ
36.8, 65.5, 118.7, 123.6, 124.3, 125.2, 129.0, 130.7, 132.4, 133.7,
134.2, 149.6, 152.8, 164.6. Purity of 99.5% as determined by RP-HPLC, tR = 14.74 min (linear gradient system of 30–100%
B in A for 20 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O5S [M+H]+, 478.99054; found 478.99785.
Synthesis of 3-(3,4-Dichlorophenylthio)propanoic Acid (25a) and 3-(2,3-Dichlorophenylthio)propanoic Acid (25b)
An ice-cold mixture consisting of 3-bromopropionic acid
(2.12 g, 13.6 mmol) and Na2CO3 (1.172 g, 13.6
mmol) dissolved in water (10 mL) was added dropwise to a solution
of either 3,4-dichlorobenzenethiol or 2,3-dichlorobenzenethiol (2.5
g, 13.6 mmol) in aqueous 2N NaOH solution (6 mL) and ethanol (2 mL).
This reaction mixture was heated at 100 °C for 4 h, cooled to
RT, and extracted with ether. The precipitate formed after acidification
of the aqueous portion with ice-cold 3 N HCl to pH = 2 followed by
cooling to 0 °C for 30 min was filtered off and dried to give
either 25a or 25b.
25a
White solid; yield 3.0 g (88%); mp
70–72 °C. 1H NMR (CDCl3, 400 MHz)
in ppm: δ 2.68 (t, 2H, J = 8 Hz), 3.15 (t,
2H, J = 8 Hz), 7.16–7.18 (m, 1H), 7.35 (d, J = 8.0 Hz, 1H), 7.41–7.43 (m, 1H), 11.40 (bs, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ 28.9, 34.2,
129.3, 130.9, 131.1, 131.4, 133.2, 135.6, 178.1. Purity of 99.3% as
determined by RP-HPLC, tR = 15.33 min
(linear gradient system of 0–100% B in A for 26 min). ESI-MS
calcd MW for C9H8Cl2O2S, 251.13, found: m/z = 249.01 (M – H)−.
25b
Off-white solid;
yield 2.8 g (82%);
mp 139–142 °C. 1H NMR (CDCl3, 500
MHz) in ppm: δ 2.61 (t, 2H), 3.20 (t, 2H), 7.31–7.36
(m, 1H), 7.39–7.42 (m, 1H), 12.43 (s, 1H). 13C NMR
(CDCl3, 125 MHz) in ppm: δ 27.4, 33.6, 125.8, 127.2,
129.0, 129.2, 132.8, 139.2, 173.1. Purity of 95.6% as determined by
RP-HPLC, tR = 14.96 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C9H8Cl2O2S, 251.13; found, m/z = 250.57
(M – H)−.
Synthesis of 6,7-Dichlorothiochroman-4-one
(26a) and 7,8-Dichlorothiochroman-4-one (26b)
Ketones25a or 25b (2.8 g, 11.1
mmol) were added portionwise
to stirred concd H2SO4 (50 mL), previously cooled
to −10 °C, and warmed to RT and left stand for 2 h. The
dark-red reaction mixture was poured slowly over ice-cold water (400
mL) and kept aside for 1 h to form a white precipitate. Pure 26a and 26b were obtained after recrystallization
from ethanol.
26a
White crystals; yield 2.0 g (77%);
mp 143–146 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.92 (m, 2H), 3.21–3.25 (m, 2H), 7.36
(s, 1H), 8.10 (s, 1H). 13C NMR (CDCl3, 100 MHz)
in ppm: δ 26.8, 39.1, 129.1, 129.8, 130.3, 130.7, 138.1, 141.8,
192.2. Purity of 100% as determined by RP-HPLC, tR = 17.33 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C9H6Cl2OS, 233.11; found, m/z = 232.81 and 234.83 (M + H)+.
26b
Off-white solid; yield 2.3 g (88%);
mp 112–115 °C. 1H NMR (CDCl3, 500
MHz) in ppm: δ 2.87 (m, 2H), 3.37 (m, 2H), 7.42–7.45
(m, 1H), 7.87–7.89 (m, 1H). 13C NMR (CDCl3, 125 MHz) in ppm: δ 26.0, 37.8, 126.4, 128.5, 128.7, 131.4,
137.5, 144.3, 192.9. Purity of 99.1% as determined by RP-HPLC, tR = 16.88 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C9H6Cl2OS, 233.11; found, m/z = 232.81 and 234.83 (M + H)+.
Synthesis of 3-Bromo-6,7-dichloro-2,3-dihydrothiochromen-4-one
(27a) and 3-Bromo-7,8-dichloro-2,3-dihydrothiochromen-4-one
(27b)
To a solution of (0.5 g, 2.14 mmol) 26a or 26b dissolved in dry chloroform (20 mL)
was added dropwise a solution of bromine (0.342 g, 2.14 mmol) in chloroform
(5 mL). The reaction mixture was stirred at RT for 2 h and then at
60 °C for 1 h. It was then cooled to RT and extracted with 10%
(w/v) Na2S2O3 solution (25 mL). The
organic phase was washed with water (50 mL), dried over anhydrous
Na2SO4, filtered, and concentrated under vacuum
to give crude bromide. It was subjected to silica gel FCC using hexane–ethyl
acetate (9:1, v/v) solvent mixture to yield pure 27a and 27b.
27a
Off-white solid; yield 0.4 g (60%);
mp 128–131 °C. 1H NMR (CDCl3, 500
MHz) in ppm: δ 3.44–3.48 (m, 1H), 3.67–3.70 (m,
1H), 4.90–4.92 (m, 1H), 7.40 (s, 1H), 8.18 (s, 1H). 13C NMR (CDCl3, 125 MHz) in ppm: δ 35.0, 48.2, 128.8,
130.6, 132.0, 139.0, 140.6, 185.4. Purity of 98.4% as determined by
RP-HPLC, tR = 18.61 min (linear gradient
system of 0–100% B in A for 26 min).
27b
Off-white solid;
yield 0.461 g (69%);
mp 104–106 °C. 1H NMR (CDCl3, 500
MHz) in ppm: δ 3.47–3.54 (m, 1H), 3.67–3.71 (m,
1H), 4.90–4.92 (m, 1H), 7.31 (d, 1H), 8.01 (d, 1H). 13C NMR (CDCl3, 125 MHz) in ppm: δ 34.6, 47.6, 126.7,
128.2, 129.5, 139.5, 142.9, 185.9. Purity of 99.1% as determined by
RP-HPLC, tR = 18.23 min (linear gradient
system of 0–100% B in A for 26 min).
Synthesis
of (E/Z)-2-(2-(7,8-Dichloro-4H-thiachromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-29a]
A solution of 27a (0.5 g, 1.6 mmol)
and thiosemicarbazide (0.145 g, 1.6 mmol) in anhydrous dioxane (20
mL) was stirred at RT for 24 h and then heated to 80 °C for 12
h. The reaction mixture was then cooled to RT, and the precipitate
was filtered, washed with dioxane (20 mL), and dried. The solid was
triturated with 2 M Na2CO3 (40 mL), filtered,
thoroughly washed with water, and dried to yield 28a,
which was used as such in the next step.
28a
Yield 0.304 g (62%). ESI-MS calcd MW for C10H7Cl2N3S2, 304.22; found, m/z = 303.92 and 305.94 (M + H)+.A suspension of 28a (0.304 g, 1
mmol) in 5% (v/v) acetic acid (7 mL) was added to 2-(o-nitrophenyl)pyruvic acid (0.209 g, 1 mmol) in ethanol (14 mL) and
was heated at 90–100 °C for 2 h. The yellow precipitate
that formed upon cooling to RT was filtered, washed with water, and
dried. The crude mixture containing the two isomers, (E)-29a and (Z)-29a, were
purified on a RP-C18 FCC (100 g cartridge, flow rate =
40 mL/min) using a linear gradient of 0–60% B in A for 3 h
(A, triethylammonium bicarbonate buffer (50 mM, pH = 8.5), and B,
methanol). The purified isomers were precipitated from their respective
pooled fractions following acidification with 10% (v/v) HCl to pH
= 2 and separated by centrifugation. The pellets were washed consecutively
with 5% (v/v) HCl and water and dried under vacuum to yield the following:
(E)-29a
Brown powder;
yield 0.096 g (20%); mp 259–260 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 4.26
(s, 2H), 4.28 (s, 2H), 7.06 (d, J =10.0 Hz, 1H),
7.48–7.52 (m, 1H), 7.51 (s, 1H), 7.58–7.66 (m, 1H),
7.69 (s, 1H), 8.06 (d, 1H), 12.10 (bs, 1H), 12.77 (bs, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ
23.8, 29.9, 125.7, 128.5, 128.7, 128.8, 129.5, 130.2, 131.6, 132.1,
134.5, 149.6, 165.9. Purity of 99.2% as determined by RP-HPLC, tR = 10.33 min (linear gradient system of 50–100%
B in A for 20 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O4S2 [M+H]+, 494.96770; found 494.97625.
(Z)-29a
Brown powder;
yield 0.035 g (7%); mp 230–231 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 4.15 (s, 2H), 4.17
(s, 2H), 7.49–7.56 (m, 3H), 7.66–7.72 (m, 2H), 8.03
(d, J = 8 Hz, 1H), 12.66 (bs, 1H). 13C
NMR (DMSO-d6, 100 MHz) in ppm: δ
23.7, 36.8, 125.2, 125.9, 128.6, 128.9, 130.3, 132.0, 132.4, 133.6,
134.2, 149.7, 164.7. Purity of 99.8% as determined by RP-HPLC, tR = 13.33 min (linear gradient system of 50–100%
B in A for 20 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O4S2 [M+H]+, 494.96770; found 494.97396.
Synthesis of (E/Z)-2-(2-(6,7-Dichloro-4H-thiachromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-29b]
Synthesis of 28b followed the identical
procedure as described for 28a.
28b
Yield 0.280 g
(57%). ESI-MS calcd MW for C10H7Cl2N3S2, 304.22; found, m/z = 303.92 and 305.94 (M + H)+.Synthesis of (E)-29b and (Z)-29b followed the identical
procedure as described for (E)-29a and
(Z)-29a adjusted to 0.82 mmol scale
for the 28a and 2-(o-nitrophenyl)pyruvic
acid.
(E)-29b
Orange powder;
yield 0.090 g (22%); mp 225–226 °C. 1H NMR
(DMSO-d6, 400 MHz) in ppm: δ 4.27
(s, 2H), 4.32 (s, 2H), 7.05 (d, J = 8 Hz, 1H), 7.39
(d, J = 8 Hz, 1H), 7.47–7.52 (m, 1H), 7.59–7.68
(m, 2H), 8.05 (d, J = 8 Hz, 1H), 12.21 (s, 1H), 12.74
(s, 1H). 13C NMR (DMSO-d6,
100 MHz) in ppm: δ 24.2, 29.9, 124.2, 125.7, 127.5, 128.5, 129.5,
131.1, 131.7, 134.5, 148.5, 149.6, 166.0. Purity of 99.9% as determined
by RP-HPLC, tR = 15.66 min (linear gradient
system of 30–100% B in A for 20 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O4S2 [M+H]+,
494.96770; found 494.97248.
(Z)-29b
Pale-brown powder;
yield 0.035 g (9%); mp 229–230 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 4.15 (s, 2H), 4.24
(s, 2H), 7.36–7.39 (m, 1H), 7.49–7.55 (m, 2H), 7.61–7.64
(m, 1H), 7.67–7.70 (m, 1H), 8.03 (d, J = 7.6
Hz, 1H), 12.65 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 24.1, 36.8, 124.5, 125.2,
127.4, 128.3, 128.9, 130.4, 131.2, 132.4, 133.6, 134.2, 149.7, 164.7.
Purity of 99.4% as determined by RP-HPLC, tR = 18.23 min (linear gradient system of 50–100% B in A for
20 min). HRMS(ESI) m/z calcd for
C19H12Cl2N4O4S2 [M+H]+, 494.96770; found 494.97512.
Synthesis of 3-Bromo-6,7-dichlorothiochroman-4-one 1-oxide (30a) and 3-Bromo-7,8-dichloro-2,3-dihydrothiochromen-4-one-1-oxide
(30b)
A solution of m-chloroperbenzoic
acid (0.287 g, 1.72 mmol) in chloroform (10 mL) was added dropwise
to a solution of 27a or 27b (0.4 g, 1.72
mmol) in chloroform (10 mL) over a period of 30 min. The resultant
mixture was stirred at RT for 90 min and treated with saturated NaHCO3 solution (20 mL). The separated organic phase was washed
with water (50 mL), dried over anhydrous Na2SO4, filtered, and evaporated under vacuum to yield 30a or 30b, respectively.
30a
White solid; yield 0.428 g (76%);
mp 201–202 °C. Purity of 96.9% as determined by RP-HPLC, tR = 7.37 min (linear gradient system of 30–100%
B in A for 26 min). ESI-MS calcd MW for
C9H5BrCl2O2S, 328.01;
found, m/z = 326.87 (M –
H)−.
30b
White solid; yield 0.430 g (76%);
mp 211–212 °C. 1H NMR (DMSO-d6, 500 MHz) in ppm: δ 4.19 (dd, 1H, J1 = 4 Hz, J2 = 14 Hz), 4.31
(t, 1H, J = 14 Hz), 6.11 (dd, 1H, J1 = 4 Hz, J2 = 13 Hz), 8.06
(s, 2H). 13C NMR (DMSO-d6,
100 MHz) in ppm: δ 44.8, 52.2, 129.8, 130.3, 133.8, 135.0, 139.3,
142.8, 186.5. Purity of 92.2% as determined by RP-HPLC, tR = 11.74 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C9H5BrCl2O2S, 328.01;
found, m/z = 326.74 (M –
H)−.
Synthesis of (E/Z)-2-(2-(7,8-Dichloro-5-oxido-4H-thiochromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-32a]
A solution of 30a (0.380 g, 1.15
mmol) and thiosemicarbazide (0.105 g, 1.15 mmol) in anhydrous dioxane
(20 mL) was stirred at RT for 24 h and then heated at 70 °C for
24 h. The mixture was cooled to RT, and the resulting precipitate
was filtered, washed with dioxane (20 mL), and dried. The solid was
triturated with 2 M Na2CO3 (40 mL), filtered,
washed with water, and dried under vacuum to yield the crude 31a.
31a
Yield 0.240 g (65%). ESI-MS calcd MW for C10H7Cl2N3OS2, 320.22; found, m/z = 321.83 (M + H)+.To a suspension
of 31a (0.186 g,
0.581 mmol) in acetic acid (10 mL) was added 2-(o-nitrophenyl)pyruvic acid (0.121 g, 0.581 mmol). The reaction mixture
was stirred at RT for 2 h and diluted with water (20 mL), forming
a brown precipitate that was filtered, washed with water (40 mL),
and dried. The crude mixture of the two isomers, (E)-32a and (Z)-32a, were
purified on a RP-C18 FCC (100 g cartridge, flow rate =
40 mL/min) using a linear gradient system of 0–100% of B in
A for 3h (A, water, and B, methanol).
(E)-32a
Brown fluffy
solid; yield 0.044 g (17%) mp: 204–206 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ
4.30 (s, 2H), 4.35 (d, 1H, J = 16.0 Hz), 4.80 (d,
1H, J = 16.0 Hz), 7.08 (d, 1H, J = 8.0 Hz), 7.48–7.52 (m, 1H), 7.62–7.66 (m, 1H), 7.89
(s, 1H), 8.06 (d, 1H, J = 8.0 Hz), 8.14 (s, 1H),
12.26–12.95 (m, 2H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 30.0, 45.1, 125.7, 126.4,
128.5, 129.7, 131.0, 131.9, 134.5, 136.1, 136.9, 149.7, 165.8. Purity
of 96.5% as determined by RP-HPLC, tR =
9.82 min (linear gradient system of 30–100% B in A for 20 min).
HRMS(ESI) m/z calcd for C19H12Cl2N4O5S2 [M+H]+, 510.96261; found 510.97205.
(Z)-32a
Brown fluffy
solid; yield 0.02 g (8%); mp 200–202 °C. 1H
NMR (DMSO-d6, 500 MHz) in ppm: δ
4.19 (s, 2H), 4.29 (d, 1H, J = 15.0 Hz), 4.73 (d,
1H, J = 20.0 Hz), 7.52–7.57 (m, 2H), 7.69–7.72
(m, 1H), 8.00 (s, 1H), 8.05 (d, 1H, 5.0 Hz), 8.13 (s, 1H), 12.71 (s,
1H). 13C NMR (DMSO-d6, 125
MHz) in ppm: δ 36.8, 45.1, 115.8, 125.2, 126.7, 128.9, 129.1,
131.1, 131.7, 132.3, 134.1, 149.8, 164.6, 167.4. Purity of 95.1% as
determined by RP-HPLC, tR = 10.38 min
(linear gradient system of 30–100% B in A for 20 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O5S2 [M+H]+, 510.96261; found 510.97105.
Synthesis of (E/Z)-2-(2-(7,8-Dichloro-4H-5-oxothiochromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-32b]
Synthesis of 31b followed the identical
procedure as described for 31a.
31b
Yield 0.186 g
(50%). ESI-MS calcd MW for C10H7Cl2N3OS2, 320.22; found, m/z = 319.77 (M – H)−.Synthesis of (E)-32b and (Z)-32b followed the identical
procedure as described for (E)-29a and
(Z)-29a adjusted to 0.58 mmol scale
for the 31b and 2-(o-nitrophenyl)pyruvic
acid.
(E)-32b
Brown fluffy
solid; yield 0.056 g (18%); mp 190–192 °C (dec). 1H NMR (DMSO-d6, 500 MHz) in ppm:
δ 4.27–4.31 (m, 3H), 4.95–5.01 (m, 1H), 7.06–7.07
(m, 1H), 7.48–7.51 (m, 1H), 7.62–7.65 (m, 1H), 7.86–7.94
(m, 1H), 8.05–8.08 (m, 1H), 12.24 (s, 1H). 13C NMR
(DMSO-d6, 125 MHz) in ppm: δ 30.0,
40.4, 125.5, 125.7, 128.5, 129.5, 131.6, 133.4, 134.6, 134.9, 136.6,
149.6, 165.9. Purity of 98.2% as determined by RP-HPLC, tR = 8.74 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O5S2 [M+H]+, 510.96261; found 510.96985.
(Z)-32b
Brown fluffy
solid; yield 0.015 g (5%); mp > 300 °C. 1H NMR
(DMSO-d6, 400 MHz) in ppm: δ 4.17–4.29
(m, 3H), 4.90 (d, 1H, J = 17.6 Hz), 7.51–7.59
(m, 2H), 7.68–7.73 (m, 1H), 7.89–7.96 (m, 2H), 8.04
(d, 1H, J = 8 Hz), 13.03 (s, 1H). 13C
NMR (DMSO-d6, 100 MHz) in ppm: δ
45.0, 125.2, 125.8, 128.9, 129.9, 131.6, 132.6, 133.3, 133.6, 134.2,
134.8, 136.6, 149.8. Purity of 96.0% as determined by RP-HPLC, tR = 10.12 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O5S2 [M+H]+, 510.96261; found 510.96978.
Synthesis of 1,1-Dioxo-3-bromo-6,7-dichloro-2,3-dihydrothiochromen-4-one
(33a)
A solution of m-chloroperbenzoic
acid (2.21 g, 12.8 mmol) in chloroform (10 mL) was added dropwise
over 30 min to a stirred solution of 27a (1.0 g, 3.20
mmol) in chloroform (40 mL) at 60 °C. The resultant mixture was
refluxed for 6 h and cooled to RT. The precipitated sulfone was filtered
and dried. Additional product was obtained by consecutive washings
of the filtrate with saturated NaHCO3 solution (100 mL)
and water (100 mL). The separated organic phase was dried over anhydrous
Na2SO4, filtered, and evaporated under vacuum
and combined with the previously obtained precipitate to afford the
sulfone33a.
33a
Off-white solid; yield 0.8 g (72%);
mp 255–256 °C. 1H NMR (DMSO-d6, 500 MHz) in ppm: δ 4.65–4.68 (m, 1H),
4.77–4.82 (m, 1H), 5.87–5.91 (m, 1H), 8.22 (d, 1H),
8.28 (d, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 46.4, 56.6, 126.2, 128.4, 131.37, 137.7,
139.2, 141.5, 184.2. Purity of 100% as determined by RP-HPLC, tR = 8.79 min (linear gradient system of 30–100%
B in A for 20 min). ESI-MS calcd MW for
C9H5BrCl2O3S, 344.01;
found, m/z = 342.76 (M –
H)−.
Synthesis of 1,1-Dioxo-3-bromo-7,8-dichloro-2,3-dihydrothiochromen-4-one
(33b)
A solution of m-chloroperbenzoic
acid (1.21 g, 6.9 mmol) in chloroform (15 mL) was added dropwise over
30 min to a solution of 27b (0.543 g 1.74 mmol) in chloroform
(10 mL) that was kept at 60 °C. After refluxing the reaction
mixture for 12 h, it was cooled to RT, diluted with dichloromethane
(50 mL), and washed with saturated NaHCO3 solution (3 ×
100 mL) and water (100 mL). The organic phase was dried over anhydrous
Na2SO4, filtered, and evaporated under vacuum
to yield an oily residue, which yielded 33b following
trituration with ice-cold hexane.
33b
White solid; yield 0.5 g (83%); mp
254–255 °C (dec.). Purity of 98.1% as determined by RP-HPLC, tR = 14.55 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C9H5BrCl2O3S, 344.01;
found, m/z = 342.82 [M –
H]−.
Synthesis of (E/Z)-2-(2-(7,8-Dichloro-4H-thiodioxochromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-35a]
A solution of 33a (0.7 g, 2 mmol)
and thiosemicarbazide (0.181 g, 2 mmol) in anhydrous dioxane (30 mL)
was stirred at 90 °C for 2 d. Cooling the reaction mixture to
RT resulted in a precipitate that was filtered, washed with dioxane
(10 mL), and dried. The solid was triturated in 2 M Na2CO3 (40 mL), filtered, washed thoroughly with water, and
dried to yield the respective crude 34a.
34a
Yield 0.230 g
(33%). ESI-MS calcd MW for C10H7Cl2N3O2S2, 336.22; found, m/z = 337.84 (M
+ H)+.The 2-(o-nitrophenyl)pyruvic
acid (0.154 g, 0.74 mmol) was added to a suspension of 34a (0.25 g, 0.74 mmol) in acetic acid (20 mL), and the reaction mixture
was stirred at RT for 4 h. The formed precipitate was filtered, washed
thoroughly with glacial acetic acid (20 mL), and dried to give (E)-35a. Diluting the combined acetic acid filtrates
with water (100 mL) generated a precipitate that was washed with methanol
to afford (Z)-35a.
(E)-35a
Brown fluffy
solid; yield 0.16 g, (41%). mp 240–241 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ
4.28 (s, 2H), 5.11 (s, 2H), 7.06 (d, 1H, J = 8 Hz),
7.48–7.52 (m, 1H), 7.61–7.65 (m, 1H), 7.91 (s, 1H),
8.02–8.07 (m, 2H), 12.32 (bs, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 30.1, 49.2, 125.7,
125.8, 126.0, 127.5, 128.5, 129.6, 131.4, 131.5, 131.6, 134.6, 135.3,
137.4, 149.6, 165.8. Purity of 98.7% as determined by RP-HPLC, tR = 12.41 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O6S2 [M+H]+, 526.95753; found 526.96875.
(Z)-35a
Gray fluffy solid;
yield 0.065 g, (17%). mp 248–249 °C. 1H NMR
(DMSO-d6, 400 MHz) in ppm: δ 4.18
(s, 2H), 5.04 (s, 2H), 7.51–7.71 (m, 3H), 8.02–8.05
(m, 3H), 12.74 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 36.9, 49.17, 117.5, 125.2,
125.8, 129.0, 131.2, 131.7, 132.2, 133.6, 134.2, 135.2, 136.2, 137.5,
140.7, 149.6, 164.7, 167.5. Purity of 99.2% as determined by RP-HPLC, tR = 13.63 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O6S2 [M+H]+, 526.95753; found 526.96705.
Synthesis of (E/Z)-2-(2-(7,8-Dichloro-4H-thiodioxochromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-35b]
Step A: Synthesis of 7,8-Dichloro-2-hydrazinyl-4H-thiochromeno[4,3-d]thiazole 5,5-Dioxide (34b)
Synthesis of 34b followed the identical
procedure as described for 34a.
34b
Yield 0.350 g
(50%). ESI-MS calcd MW for C10H7Cl2N3O2S2, 336.22; found, m/z = 337.97 (M
+ H)+.To a suspension of 34b (0.25 g,
0.74 mmol) in acetic acid (20 mL) was added 2-(o-nitrophenyl)pyruvic
acid (0.155 g, 0.74 mmol). The reaction mixture was stirred at RT
for 4 h and then diluted with water (100 mL). The precipitated solid
was filtered and dried. The crude mixture was purified on a RP-C18 FCC (100 g cartridge, flow rate = 40 mL/min) using a solvent
system consisting of A, triethylammonium bicarbonate buffer (50 mM,
pH = 8.5), and B, methanol. The purified isomers (E)-35b and (Z)-35b were
precipitated from their respective pooled fractions following addition
of 10% HCl (pH = 2) and separated by centrifugation. The pellets were
washed consecutively with 5% (v/v) HCl and water and dried under vacuum
to yield the following:
(E)-35b
Off-white fluffy
solid; yield 0.080 g (20%); mp 236–237 °C. 1H NMR (DMSO-d6, 500 MHz) in ppm: δ
4.29 (s, 2H), 5.19 (s, 2H), 7.07 (d, 1H, J = 5 Hz),
7.49–7.51 (m, 1H), 7.62–7.65 (m, 1H), 7.84–7.87
(m, 1H), 7.94–7.98 (m, 1H), 8.05–8.07 (m, 1H), 12.20
(s, 1H). 13C NMR (DMSO-d6,
125 MHz) in ppm: δ 30.1, 51.1, 125.7, 126.5, 128.5, 128.7, 129.6,
131.5, 133.4, 134.4, 134.5, 135.2, 149.6, 165.8. Purity of 99.9% as
determined by RP-HPLC, tR = 11.48 min
(linear gradient system of 30–100% B in A for 26 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O6S2 [M + H]+, 526.95753; found 526.95913.
(Z)-35b
Pale-green fluffy
solid; yield 0.045 g (11%); mp 247–248 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ
4.18 (s, 2H), 5.13 (s, 2H), 7.51–7.57 (m, 2H), 7.70 (t, 1H, J = 8 Hz), 7.90–7.95 (m, 2H), 8.04 (d, 1H, J = 8 Hz), 12.70 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm: δ 36.9, 51.0, 115.9,
125.2, 126.9, 128.5, 129.0, 132.1, 132.3, 133.5, 133.6, 134.2, 134.3,
135.8, 136.1, 141.4, 149.6, 164.7, 167.3. Purity of 99.9% as determined
by RP-HPLC, tR = 12.41 min (linear gradient
system of 30–100% B in A for 26 min). HRMS(ESI) m/z calcd for C19H12Cl2N4O6S2 [M + H]+, 526.95753; found 526.96467.
Synthesis of 3-Chloro-1-(2-hydroxy-4,5-dimethoxyphenyl)propan-1-one
(37)
The borontrifluoride etherate (1.25 mL,
10 mmol) was added dropwise over 3 min to a mixture of 3,4-dimethoxyphenol
(1.5 g, 10 mmol) and 2-chloropropanoyl chloride (1.8 mL, 20 mmol)
and kept at 60 °C for 3 h. The reaction was quenched by pouring
the mixture into a mixture of ice-cold water (30 mL) and dichloromethane
(30 mL) and stirred overnight at RT. The organic phase was separated,
dried with anhydrous Na2SO4, and concentrated
under vacuum. The crude product was subjected to silica gel FCC employing
hexane–ethyl acetate mixture (9:1, v/v) as eluent followed
by recrystallization from dichloromethane to obtain 37.
37
Yellow
crystals; Rf 0.85 (dichloromethane, silica
gel); yield 1.0 g (44%);
mp 133–135 °C. 1H NMR (CDCl3, 500
MHz) in ppm: δ 3.36 (t, 2H), 3.83 (s, 3H), 3.88 (s, 3H), 3.87–3.90
(m, 2H), 6.42 (s, 1H), 6.98 (s, 1H). 13C NMR (CDCl3, 125 MHz) in ppm: δ 38.7, 40.7, 56.4, 56.8, 100.8,
110.6, 111.3, 142.3, 157.3, 160.5, 200.1. Purity of 96.7% as determined
by RP-HPLC, tR = 13.98 min (linear gradient
system of 0–100% B in A for 26 min).
Synthesis
of 6,7-Dimethoxy-2,3-dihydrochromene-4-one (43a)
A mixture of 37 (0.2 g, 0.8 mmol)
and K2CO3 (0.56 g, 40 mmol) in ethanol (10 mL)
was stirred for 20 h at RT. The reaction mixture was filtered, and
the filtrate was concentrated under vacuum to afford a yellow residue.
The residue was diluted with ethyl acetate (20 mL) and water (20 mL).
The organic phase was washed with 5% (w/v) NaHCO3 solution
(20 mL), dried over anhydrous Na2SO4, and concentrated
under vacuum. The resultant residue was purified on a silica gel FCC
using cyclohexane–ethyl acetate mixture (7:3, v/v) as eluent
to yield.
43a
Off-white solid; Rf 0.35 (cyclohexane–ethyl
acetate, 7:3 (v/v), silica
gel); yield 0.07 g (42%); mp 124–127 °C. 1H
NMR (CDCl3, 400 MHz) in ppm: δ 2.70–2.73 (m,
2H), 3.82 (s, 3H), 3.88 (s, 3H), 4.45–4.49 (m, 2H), 6.39 (s,
1H), 7.26 (s, 1H). 13C NMR (CDCl3, 100 MHz)
in ppm: δ 37.4, 56.3, 56.4, 67.7, 100.2, 106.9, 113.7, 114.6,
156.2, 158.5, 190.7. Purity of 98.9% as determined by RP-HPLC, tR = 9.75 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C11H12O4, 208.21; found, m/z = 206.73 (M – H)−.
Synthesis of 3-Bromo-6,7-dimethoxy-2,3-dihydrochromen-4-one
(44a)
Synthesis of 44a followed
the identical procedure as described for 21a adjusted
to 2.8 mmol scale for the 43a and pyridinium bromide
perbromide.
44a
Off-white solid; Rf 0.41 (cyclohexane–ethyl
acetate, 7:3 (v/v), silica
gel); yield 0.6 g (75%); mp 154–156 °C. 1H
NMR (CDCl3, 400 MHz) in ppm: δ 3.89 (s, 3H), 3.90
(s, 3H), 4.53–4.62 (m, 3H), 6.46 (s, 1H), 7.27 (s, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ 45.4, 56.4,
56.6, 72.1, 100.1, 107.5, 111.1, 145.5, 157.1, 157.5, 184.1. Purity
of 97.1% as determined by RP-HPLC, tR =
5.77 min (linear gradient system of 30–100% B in A for 26 min).
ESI-MS calcd MW for C11H11BrO4, 287.11; found, m/z = 288.95 [M + H]+.
Synthesis
of (E/Z)-2-(2-(7,8-Dimethoxy-4H-chromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-46a]
Step A: Synthesis of 1-(7,8-Dimethoxy-4H-chromeno[4,3-d]thiazol-2-yl)hydrazine (45a)
A solution
of 3-bromo-6,7-dimethoxy-2,3-dihydrochromen-4-one (0.5 g, 1.7 mmol)
and thiosemicarbazide (0.157 g, 1.7 mmol) in anhydrous dioxane (20
mL) was stirred at 80 °C for 2 d. The resulting yellow precipitate
was filtered, washed with dioxane (10 mL), triturated in 2 M Na2CO3 solution (30 mL), and filtered, and washed
thoroughly with water and dried to afford the crude 45a.
45a
Off-white solid; yield 0.34 g (72%).
ESI-MS calcd MW for C12H13N3O3S, 279.31; found, m/z = 279.73 (M – H)−.Synthesis of (E)-46a, and (Z)-46a followed the identical
procedure as described for (E)-13a and
(Z)-13a adjusted to 0.7 mmol scale for
the 45a and 2-(o-nitrophenyl)pyruvic
acid.
(E)-46a
Yellow powder;
yield 0.055 g (17%); mp 202–204 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 3.67
(s, 3H), 3.73 (s, 3H), 4.29 (s, 2H), 5.29 (s, 2H), 6.61 (s, 1H), 6.98
(s, 1H), 7.08 (d, 1H, J = 7.5 Hz), 7.49–7.52
(m, 1H), 7.63–7.66 (m, 1H), 8.06 (d, 1H, J = 8.5 Hz), 12.58 (s, 2H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 29.8, 56.3, 56.4, 64.7, 102.2,
106.1, 125.7, 128.5, 129.5, 131.7, 134.5, 144.3, 147.9, 149.7, 149.8,
166.1. Purity of 99.0% as determined by RP-HPLC, tR = 9.07 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C21H18N4O7S [M + H]+, 471.08961; found 471.09633.
(Z)-46a
Yellow powder;
yield 0.06 g (18%); mp 238–240 °C. 1H NMR (DMSO-d6, 500 MHz) in ppm: δ 3.67 (s, 6H), 4.16
(s, 2H), 5.20 (s, 2H), 6.57 (s, 1H), 7.02 (s, 1H), 7.50–7.55
(m, 2H), 7.67–7.69 (m, 1H), 8.03–8.05 (m, 1H), 12.78
(s, 1H). 13C NMR (DMSO-d6,
125 MHz) in ppm: δ 36.7, 56.3, 56.5, 64.6, 102.1, 106.4, 125.2,
128.9, 132.5, 133.6, 134.2, 144.3, 147.8, 149.7, 149.9, 164.7. Purity
of 99.5% as determined by RP-HPLC, tR =
10.90 min (linear gradient system of 30–100% B in A for 26
min). HRMS(ESI) m/z calcd for C21H18N4O7S [M + H]+, 471.08961; found 471.09668.
Synthesis of 3-(2,3-Dimethoxyphenoxy)propanoic
Acid (42)
The oxetan-2-one (1.8 g, 2.5 mmol)
was added dropwise
during 5 min to a stirred solution of 2,3-dimethoxyphenol (4.0 g,
25 mmol) in 0.625 M NaOH (40 mL), and the mixture was kept at 100
°C for 3 h. After cooling to RT, the reaction mixture was diluted
with water (50 mL) followed by acidification with concd HCl (10 mL).
The product was extracted into diethyl ether (2 × 100 mL), and
the combined ethereal phases were then washed with 10% (w/v) NaHCO3 solution (100 mL). The separated aqueous phase was acidified
with concd HCl to pH = 2 and kept at 4 °C overnight to afford 42.
42
Off-white solid; yield 2.5 g (40%);
mp 104–106 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.89 (t, 2H, J = 6.4 Hz), 3.81
(s, 3H), 3.85 (s, 3H), 4.29 (t, 2H, J = 6.4 Hz),
6.59 (d, 2H, J = 8.8 Hz), 6.94–6.97 (m, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ 34.6, 56.3,
61.0, 64.6, 106.1, 107.4, 123.8, 138.9, 152.4, 153.8, 177.0. Purity
of 93.5% as determined by RP-HPLC, tR =
9.81 min (linear gradient system of 0–100% B in A for 26 min).
ESI-MS calcd MW for C11H14O5, 226.23; found, m/z = 224.99 (M – H)−.
Synthesis
of 7,8-Dimethoxy-2,3-dihydrochromen-4-one (43b)
To a solution of 42 (1.1 g, 4.8 mmol) dissolved
in dry benzene (40 mL) was added phosphorus pentoxide (6 g) and refluxed
for 4 h and then cooled to RT. Benzene was decanted off, and the residue
was triturated with benzene (2 × 10 mL) and collected with the
previously decanted solvent. Ice-cold water (20 mL) was added dropwise
to the residual slurry of phosphorus pentoxide, and the mixture was
extracted with benzene (20 mL). The combined benzene fractions were
washed successively with 10% (v/v) NaHCO3 (40 mL), 1N NaOH
(40 mL), and water (40 mL). The organic phase was dried over anhydrous
Na2SO4, filtered, and evaporated under vacuum
to yield 43b.
43b
Pale-yellow solid; yield 0.8 g (79%);
mp 102–104 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.72–2.75 (m, 2H), 3.83 (s, 3H), 3.89
(s, 3H), 4.53–4.56 (m, 2H), 6.60 (d, 1H, J = 8.0 Hz), 7.64 (d, 1H, J = 8.0 Hz). 13C NMR (CDCl3, 100 MHz) in ppm: δ 37.7, 56.3, 61.2,
67.8, 105.7, 116.7, 123.3, 136.9, 155.9, 158.7, 190.8. Purity of 95.81%
as determined by RP-HPLC, tR = 9.44 min
(linear gradient system of 0–100% B in A for 26 min). ESI-MS
calcd MW for C11H12O4, 208.21; found, m/z = 208.91 (M + H)+.
Synthesis of 3-Bromo-7,8-dimethoxy-2,3-dihydrochromen-4-one
(44b)
Synthesis of 44b followed
the identical procedure as described for 21a adjusted
to 2.4 mmol scale for ketone43b and pyridinium bromide
perbromide.
44b
Pale-yellow solid; yield 0.33 g (48%);
mp 118–120 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 3.86 (s, 3H), 3.92 (s, 3H), 4.57–4.60
(m, 1H), 4.63–4.68 (m, 2H), 6.69 (d, 1H, J = 8.0 Hz), 7.69 (d, 1H, J = 8.0 Hz). 13C NMR (CDCl3, 100 MHz) in ppm: δ 45.4, 56.5, 61.4,
71.9, 106.8, 113.9, 124.5, 136.8, 154.8, 159.4, 184.4. Purity of 97.3%
as determined by RP-HPLC, tR = 5.84 min
(linear gradient system of 30–100% B in A for 26 min). ESI-MS
calcd MW for C11H11BrO4, 287.11; found, m/z = 286.84 [M + H]+.
Synthesis of (E/Z)-2-(2-(6,7-Dimethoxy-4H-chromeno[4,3-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic
Acid [(E/Z)-46b]
Step A: Synthesis of 1-(6,7-Dimethoxy-4H-chromeno[4,3-d]thiazol-2-yl)hydrazine, (45b)
A
solution of 44b (0.4 g, 1.36 mmol) and thiosemicarbazide
(0.158 g, 1.36 mmol) in anhydrous dioxane (20 mL) was stirred at 50
°C for 24 h, and the resulting precipitate was filtered, washed
with dioxane (10 mL), and triturated with 2 M Na2CO3 (15 mL) to afford the crude 45b, which was used
as such in the next step.
45b
White powder; yield 0.18 g (38%).
ESI-MS calcd MW for C12H13N3O3S, 279.31; found, m/z = 279.90 (M + H)+.Synthesis of (E)-46b and
(Z)-46b followed the identical
procedure as described for (E)-13a and
(Z)-13a adjusted to 0.5 mmol scale for
the 45b and 2-(o-nitrophenyl)pyruvic
acid.
(E)-46b
Yellow solid;
yield 0.08 g (34%); mp 258–260 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 3.67 (s, 3H), 3.74
(s, 3H), 4.27 (s, 2H), 5.34 (s, 2H), 6.62 (d, 1H, J = 8 Hz), 7.06 (d, 1H, J = 8 Hz), 7.12 (d, 1H, J = 8 Hz), 7.49–7.51 (m, 1H), 7.63–7.65 (m,
1H), 8.05 (d, 1H, J = 8 Hz), 12.70 (s, 1H). 13C NMR (DMSO-d6, 100 MHz) in ppm:
δ 29.8, 56.4, 60.9, 64.9, 125.6, 128.4, 131.7, 134.5, 137.9,
147.1, 148.5, 149.6, 166.1. Purity of 100% as determined by RP-HPLC, tR = 8.78 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C21H18N4O7S [M + H]+, 471.08961; found 471.09530.
(Z)-46b
Yellow solid;
yield 0.03 g (13%); mp 239–241 °C. 1H NMR (DMSO-d6, 400 MHz) in ppm: δ 3.66 (s, 3H), 3.75
(s, 3H), 4.16 (s, 2H), 5.27 (s, 2H), 6.63 (d, 1H, J = 8.8 Hz), 7.16 (d, 1H, J = 8.8 Hz), 7.50–7.56
(m, 2H), 7.67–7.71 (m, 1H), 8.03–8.05 (m, 1H), 12.78
(bs, 1H). 13C NMR (DMSO-d6,
100 MHz) in ppm: δ 36.8, 56.4, 60.9, 64.8, 106.0, 117.6, 125.2,
128.9, 132.5, 133.6, 134.2, 137.8, 147.0, 149.6, 153.8, 164.7. Purity
of 97.9% as determined by RP-HPLC, tR =
10.38 min (linear gradient system of 30–100% B in A for 26
min). HRMS(ESI) m/z calcd for C21H18N4O7S [M + H]+, 471.08961; found 471.09987.
Synthesis of 4-(3,4-Dimethoxyphenyl)-4-oxobutanoic
Acid (39)
Veratrole, 38 (7.0 g,
50 mmol),
was added dropwise over 30 min to a stirred suspension of succinic
anhydride (6.0 g, 60 mmol) and AlCl3 (16.0 g, 120 mmol)
in nitrobenzene (40 mL) that was maintained at 10 °C. The temperature
was then slowly raised to RT, and the stirring continued for 12 h.
The reaction mixture was then poured into ice-cold water and acidified
with concd HCl to pH = 2. The formed precipitate was filtered off,
redissolved in 1N NaOH (50 mL), and extracted with ether (100 mL).
The precipitate formed upon the acidification of the aqueous phase
to pH = 2 with concd HCl was filtered, washed with water, and dried
to yield 39.
39
Pale-yellow solid; yield 5.4 g (46%);
mp 169–171 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.52–2.55 (m, 2H), 3.17–3.20 (m,
2H), 3.79 (s, 3H), 3.82 (s, 3H), 7.04 (d, J = 8.0
Hz, 1H), 7.43 (d, J = 4.0 Hz, 1H), 7.62–7.64
(m, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ
28.6, 33.3, 56.1, 56.3, 110.7, 11.5, 123.1, 130.0, 149.1, 153.6, 174.5,
197.4. Purity of 92.7% as determined by RP-HPLC, tR = 9.22 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C12H14O5, 238.24; found, m/z = 238.80 (M + H)+.
Synthesis of 6,7-Dimethoxy-3,4-dihydronaphthalen-1(2H)-one (43c)
Step 1
Synthesis
of 40 followed the identical
procedure as described for 8a adjusted to 18 mmol scale
for 39 and used in the next step without purification.
40
Brownish
oil; yield 3.0 g (70%). Purity
of 60.5% as determined by RP-HPLC, tR =
10.64 min (linear gradient system of 0–100% B in A for 26 min).
ESI-MS calcd MW for C12H16O4, 224.25; found, m/z = 224.93 (M + H)+.
Step
2
40 (3.0 g, 13.3 mmol) was added
to a melt of polyphosphoric acid (50 g) and stirred for 6 h at 90
°C. The reaction mixture was cooled to RT and diluted with ice-cold
water (100 mL). It was extracted with ethyl acetate (100 mL), washed
with a saturated solution of NaHCO3 (100 mL), dried over
anhydrous Na2SO4, and evaporated under vacuum.
The oily residue was crystallized from hexane–ethyl acetate
(1:1) followed by trituration with diethyl ether to afford 43c.
43c
Colorless solid; yield 2.0 g (57%);
mp 98–100 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.03–2.08 (m, 2H), 2.50–2.54 (m,
2H), 2.81–2.84 (m, 2H), 3.84 (s, 3H), 3.87 (s, 3H), 6.61 (s,
1H), 7.45 (s, 1H). 13C NMR (CDCl3, 100 MHz)
in ppm: δ 23.8, 29.6, 30.7, 56.1, 56.2, 108.6, 110.3, 125.9,
139.5, 148.0, 153.6, 197.3. Purity of 98.99% as determined by RP-HPLC, tR = 10.82 min (linear gradient system of 0–100%
B in A for 26 min). ESI-MS calcd MW for
C12H14O3, 206.24; found, m/z = 207.97 (M + H)+.
Synthesis of 2-Bromo-6,7-dimethoxy-3,4-dihydronaphthalen-1(2H)-one (44c)
Synthesis of 44c followed the identical procedure as described for 21a adjusted to 2.4 mmol scale for the 43c, and the crude
was purified by silica gel FCC using a mixture of hexane–ethyl
acetate (8:2, v/v).
44c
Off-white solid; yield 0.5 g (74%);
mp 110–112 °C. 1H NMR (CDCl3, 400
MHz) in ppm: δ 2.39–2.49 (m, 2H), 2.75–2.81 (m,
1H), 3.18–3.24 (m, 1H), 3.86 (s, 3H), 3.90 (s, 3H), 4.64–4.65
(m, 1H), 6.64 (s, 1H), 7.47 (s, 1H). 13C NMR (CDCl3, 100 MHz) in ppm: δ 26.0, 32.4, 56.2, 56.3, 109.7,
110.2, 123.1, 138.3, 148.5, 154.4, 189.7. Purity of 97.0% as determined
by RP-HPLC, tR = 13.24 min (linear gradient
system of 0–100% B in A for 26 min). ESI-MS calcd MW for C12H13BrO3, 285.13;
found, m/z = 287.97 (M + H)+.
Synthesis of (E/Z)-2-(2-(7,8-Dimethoxy-4,5-dihydronaphtho[1,2-d]thiazol-2-yl)hydrazono)-3-(2-nitrophenyl)propanoic Acid
[(E/Z)-46c]
Step
A: Synthesis of 1-(7,8-Dimethoxy-4,5-dihydronaphtho[1,2-d]thiazol-2-yl)hydrazine (45c)
A solution
of 44c (0.4 g, 1.4 mmol) and thiosemicarbazide (0.127
g, 1.4 mmol) in anhydrous dioxane (20 mL) was stirred at 80 °C
for 2 d. Cooling to RT afforded a yellow precipitate that was filtered,
washed with dioxane (10 mL), and dried. The solid was triturated with
a 2 M Na2CO3 (40 mL), filtered, washed thoroughly
with water, and dried to yield crude 45c. 45c: Off-white powder, yield 0.25 g (64%). ESI-MS calcd MW for C13H15N3O2S, 277.34; found, m/z = 278.01
(M + H)+.Synthesis of (E)-46c and (Z)-46c followed
the identical
procedure as described for (E)-13a and
(Z)-13a adjusted to 0.5 mmol scale for
the 45c and 2-(o-nitrophenyl)pyruvic
acid.
(E)-46c
Yellow powder;
yield 0.058 g (25%); mp 183–184 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 2.77–2.80
(m, 2H), 2.86–2.89 (m, 2H), 3.67 (s, 3H), 3.70 (s, 3H), 4.27
(s, 2H), 6.86 (s, 1H), 7.05 (d, 1H, J = 8.0 Hz),
7.13 (s, 1H), 7.47–7.50 (m, 1H), 7.61–7.65 (m, 1H),
8.04 (d, 1H, J = 8.5 Hz). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 21.9, 28.4, 29.7,
56.0, 56.2, 106.7, 113.0, 125.6, 127.4, 128.4, 129.6, 131.9, 134.4,
148.0, 148.2, 149.7, 166.2. Purity of 97.6% as determined by RP-HPLC, tR = 10.00 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C22H20N4O6S [M + H]+, 469.11035; found 469.11588.
(Z)-46c
Yellow powder;
yield 0.037 g (16%); mp 259–260 °C. 1H NMR
(DMSO-d6, 500 MHz) in ppm: δ 2.72–2.74
(m, 2H), 2.82–2.85 (m, 2H), 3.73 (s, 6H), 4.16 (s, 2H), 6.84
(s, 1H), 7.15 (s, 1H), 7.49–7.56 (m, 2H), 7.67–7.71
(m, 1H), 8.03–8.05 (m, 1H). 13C NMR (DMSO-d6, 125 MHz) in ppm: δ 21.8, 28.3, 36.6,
56.2, 125.2, 127.4, 128.8, 132.7, 133.5, 134.1, 148.0, 148.4, 149.7,
164.6. Purity of 99.3% as determined by RP-HPLC, tR = 11.22 min (linear gradient system of 30–100%
B in A for 26 min). HRMS(ESI) m/z calcd for C22H20N4O6S [M + H]+, 469.11035; found 469.11944.
Fluorescent Polarization Assay
The C-terminal fluorescein-labeled
peptide KKQYDREFLLDFQFK was synthesized by Research Genetics. This
sequence contains the Y(X)4LΦ motif and was optimized
for solubility and binding to eIF4E. A truncated eIF4E containing
a deletion of N-terminal 26 amino acids was expressed as a GST fusion
protein (GST-DN26-eIF4E). For the screening assay, a solution containing
approximately 0.5 mM GST-DN26-eIF4E, 20 nM labeled peptide, and 2
mM DTT in a buffer composed of 50 mM sodium phosphate and 50 mM potassium
chloride at pH 6.5 was used. Measurements of FP and fluorescent anisotrophy
(FA) were made in black 384-well plates (Corning) using a Perkin Elmer
Wallac EnVision 2100 Multilabel Reader.
Antiproliferation Activity
The antiproliferation activity
of rigidified mimetic of 1 were investigated on CRL-2813
cell lines and CRL-2351 cell lines by sulforhodamine B (SRB) assay.
Adherent humanbreast cancer and melanoma cells (CRL-2351 and CRL-2813)
were plated in 96-well plates and maintained for 5 days in the presence
of 0.54–20 μM compounds, and cell proliferation was measured
by the SRB assay. Briefly, cells were fixed in 10% cold trichloroacetic
acid at 4 °C overnight, extensively washed with double-distilled
H2O, and air-dried. Plates were then incubated with 0.057%
SRB in 1% acetic acid for 1 h at RT, washed with 1% acetic acid to
remove the unbound dye, and air-dried. The bound dye was solubilized
by addition of 10 mM Tris (pH 10), and the absorbance was determined
in a Thermo Scientific Multiskan FC plate reader at 510 nm. The data
calculations were carried out as described.[64]
Assessment of the Disruption of eIF4E/eIF4G Interaction by the
m7GTP Pull-Down Assay
MelanomaCRL-2813 cell lines
were incubated for 3 h in the presence of the 30 μM of each
of the compounds and 0.4% DMSO, harvested by centrifugation, and lysed
by multiple freeze–thaw cycles. Subsequently, the lysate was
incubated with m7GTP–Sepharose beads for 1 h at 4 °C to
pull-down eIF4E. The beads were separated, extensively washed, and
the bound eIF4E eluted with free m7GTP, the supernatant
was separated by SDS-PAGE, and Western blotted by polyclonal antibodies
against 4E-BP1 and monoclonal antibodies against eIF4E and eIF4G.
Western Blot Analysis
Western blot analysis was carried
out as described.[65] Anti-eIF4E antibody
(catalogue no. 610269) was from BD Transduction Laboratories (San
Jose, CA). anti-4EBP-1 (catalogue no. 9452S) and anti-eIF4G (catalogue
no. 2498S) antibodies were purchased from Cell Signaling Technology,
Inc. (Danvers, MA).
Authors: Mahendra D Chordia; Lauren J Murphree; Timothy L Macdonald; Joel Linden; Ray A Olsson Journal: Bioorg Med Chem Lett Date: 2002-06-17 Impact factor: 2.823
Authors: Nuria Vilaboa; Alba Boré; Francisco Martin-Saavedra; Melanie Bayford; Natalie Winfield; Stuart Firth-Clark; Stewart B Kirton; Richard Voellmy Journal: Nucleic Acids Res Date: 2017-06-02 Impact factor: 16.971
Authors: Olumide Kayode; Zunnan Huang; Alexei S Soares; Thomas R Caulfield; Zigang Dong; Ann M Bode; Evette S Radisky Journal: PLoS One Date: 2017-05-02 Impact factor: 3.240