Literature DB >> 24827278

Dynamical maximum entropy approach to flocking.

Andrea Cavagna1, Irene Giardina1, Francesco Ginelli2, Thierry Mora3, Duccio Piovani4, Raffaele Tavarone4, Aleksandra M Walczak5.   

Abstract

We derive a new method to infer from data the out-of-equilibrium alignment dynamics of collectively moving animal groups, by considering the maximum entropy model distribution consistent with temporal and spatial correlations of flight direction. When bird neighborhoods evolve rapidly, this dynamical inference correctly learns the parameters of the model, while a static one relying only on the spatial correlations fails. When neighbors change slowly and the detailed balance is satisfied, we recover the static procedure. We demonstrate the validity of the method on simulated data. The approach is applicable to other systems of active matter.

Year:  2014        PMID: 24827278     DOI: 10.1103/PhysRevE.89.042707

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  10 in total

1.  Fluctuating fitness shapes the clone-size distribution of immune repertoires.

Authors:  Jonathan Desponds; Thierry Mora; Aleksandra M Walczak
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-28       Impact factor: 11.205

2.  Emergent behavioural phenotypes of swarming models revealed by mimicking a frustrated anti-ferromagnet.

Authors:  D J G Pearce; M S Turner
Journal:  J R Soc Interface       Date:  2015-10-06       Impact factor: 4.118

3.  Body size affects the strength of social interactions and spatial organization of a schooling fish (Pseudomugil signifer).

Authors:  Maksym Romenskyy; James E Herbert-Read; Ashley J W Ward; David J T Sumpter
Journal:  R Soc Open Sci       Date:  2017-04-26       Impact factor: 2.963

4.  Three-dimensional trajectories and network analyses of group behaviour within chimney swift flocks during approaches to the roost.

Authors:  Dennis J Evangelista; Dylan D Ray; Sathish K Raja; Tyson L Hedrick
Journal:  Proc Biol Sci       Date:  2017-02-22       Impact factor: 5.349

5.  Detecting intermittent switching leadership in coupled dynamical systems.

Authors:  Violet Mwaffo; Jishnu Keshavan; Tyson L Hedrick; Sean Humbert
Journal:  Sci Rep       Date:  2018-07-09       Impact factor: 4.379

6.  Screening by changes in stereotypical behavior during cell motility.

Authors:  Luke Tweedy; Patrick Witzel; Doris Heinrich; Robert H Insall; Robert G Endres
Journal:  Sci Rep       Date:  2019-06-19       Impact factor: 4.379

7.  Learning the distribution of single-cell chromosome conformations in bacteria reveals emergent order across genomic scales.

Authors:  Joris J B Messelink; Muriel C F van Teeseling; Jacqueline Janssen; Martin Thanbichler; Chase P Broedersz
Journal:  Nat Commun       Date:  2021-03-30       Impact factor: 14.919

8.  On the dimensionality of behavior.

Authors:  William Bialek
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-29       Impact factor: 12.779

9.  Local equilibrium in bird flocks.

Authors:  Thierry Mora; Aleksandra M Walczak; Lorenzo Del Castello; Francesco Ginelli; Stefania Melillo; Leonardo Parisi; Massimiliano Viale; Andrea Cavagna; Irene Giardina
Journal:  Nat Phys       Date:  2016-08-15       Impact factor: 20.034

Review 10.  An introduction to the maximum entropy approach and its application to inference problems in biology.

Authors:  Andrea De Martino; Daniele De Martino
Journal:  Heliyon       Date:  2018-04-13
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.