| Literature DB >> 24826150 |
Naresh Sharma1, Goutam Brahmachari2, Suvankar Das2, Rajni Kant1, Vivek K Gupta1.
Abstract
In the title compound, C22H21N3O2, the pyrimidine ring is essentially planar [maximum deviation = 0.018 (2) Å] and forms dihedral angles of 22.70 (8) and 0.97 (7)°, respectively, with the fused benzene ring and the hy-droxy-substituted benzene ring. The piperidine ring has a chair conformation and the pyran ring has a flattened twist-boat conformation. The hy-droxy group was refined as disordered over two sets of sites in a 0.702 (4):0.298 (4) ratio. The disorder corresponds to a rotation of approxomiately 180° about the C-C bond connecting the phenol group to the pyrimidine ring and hence, both the major and minor components of disorder form intra-molecular O-H⋯N hydrogen bonds. In the crystal, pairs of weak C-H⋯π inter-actions form inversion dimers. In addition, π-π inter-actions are observed between the pyrimidine ring and the hy-droxy-substituted benzene ring [centroid-centroid separation = 3.739 (2) Å].Entities:
Year: 2014 PMID: 24826150 PMCID: PMC3998607 DOI: 10.1107/S1600536814005625
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C22H21N3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4022 reflections |
| θ = 3.4–29.1° | |
| µ = 0.09 mm−1 | |
| β = 109.381 (6)° | Block, colourless |
| 0.30 × 0.20 × 0.20 mm | |
| Oxford Diffraction Xcalibur Sapphire3 diffractometer | 3576 independent reflections |
| Radiation source: fine-focus sealed tube | 1918 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.1049 pixels mm-1 | θmax = 26.0°, θmin = 3.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 13349 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3576 reflections | (Δ/σ)max < 0.001 |
| 254 parameters | Δρmax = 0.13 e Å−3 |
| 12 restraints | Δρmin = −0.16 e Å−3 |
| Experimental. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C2 | 0.1453 (2) | 0.07319 (14) | 0.0435 (2) | 0.0477 (6) | |
| C4 | 0.3129 (2) | −0.03037 (14) | 0.1148 (2) | 0.0463 (6) | |
| C5 | 0.3928 (2) | −0.06426 (14) | 0.33523 (19) | 0.0507 (6) | |
| H5A | 0.3894 | −0.1235 | 0.3152 | 0.061* | |
| H5B | 0.4916 | −0.0469 | 0.3622 | 0.061* | |
| C6 | 0.3630 (3) | −0.10672 (16) | 0.5247 (2) | 0.0647 (8) | |
| H6 | 0.4218 | −0.1527 | 0.5280 | 0.078* | |
| C7 | 0.3085 (3) | −0.09410 (19) | 0.6134 (2) | 0.0742 (9) | |
| H7 | 0.3312 | −0.1312 | 0.6758 | 0.089* | |
| C8 | 0.2209 (3) | −0.0268 (2) | 0.6095 (3) | 0.0756 (9) | |
| H8 | 0.1837 | −0.0185 | 0.6691 | 0.091* | |
| C9 | 0.1882 (3) | 0.02815 (18) | 0.5177 (2) | 0.0658 (8) | |
| H9 | 0.1296 | 0.0742 | 0.5147 | 0.079* | |
| C11 | 0.3132 (2) | −0.01433 (14) | 0.2289 (2) | 0.0443 (6) | |
| C12 | 0.3321 (3) | −0.05240 (15) | 0.4307 (2) | 0.0499 (6) | |
| C13 | 0.2437 (3) | 0.01392 (16) | 0.4299 (2) | 0.0522 (7) | |
| C14 | 0.2228 (3) | 0.04870 (15) | 0.2367 (2) | 0.0483 (6) | |
| C16 | 0.3602 (3) | −0.11949 (17) | −0.0314 (2) | 0.0693 (8) | |
| H16A | 0.4132 | −0.0854 | −0.0688 | 0.083* | |
| H16B | 0.2598 | −0.1115 | −0.0730 | 0.083* | |
| C17 | 0.3982 (3) | −0.21068 (17) | −0.0359 (2) | 0.0731 (9) | |
| H17A | 0.3828 | −0.2264 | −0.1159 | 0.088* | |
| H17B | 0.3360 | −0.2449 | −0.0078 | 0.088* | |
| C18 | 0.5505 (3) | −0.22899 (19) | 0.0357 (3) | 0.0843 (10) | |
| H18A | 0.6137 | −0.2019 | 0.0009 | 0.101* | |
| H18B | 0.5674 | −0.2892 | 0.0374 | 0.101* | |
| C19 | 0.5809 (3) | −0.19662 (19) | 0.1583 (2) | 0.0783 (9) | |
| H19A | 0.5263 | −0.2288 | 0.1963 | 0.094* | |
| H19B | 0.6808 | −0.2040 | 0.2020 | 0.094* | |
| C20 | 0.5425 (3) | −0.10490 (16) | 0.1567 (2) | 0.0618 (7) | |
| H20A | 0.5606 | −0.0853 | 0.2355 | 0.074* | |
| H20B | 0.6010 | −0.0723 | 0.1229 | 0.074* | |
| C21 | 0.0531 (2) | 0.12112 (13) | −0.0572 (2) | 0.0488 (6) | |
| C22 | 0.0519 (3) | 0.10222 (18) | −0.1690 (2) | 0.0599 (7) | |
| H22 | 0.1079 | 0.0582 | −0.1794 | 0.072* | 0.702 (4) |
| O27A | 0.1226 (5) | 0.0461 (3) | −0.1909 (5) | 0.076 (3) | 0.298 (4) |
| H27A | 0.1672 | 0.0216 | −0.1308 | 0.114* | 0.298 (4) |
| C23 | −0.0300 (3) | 0.14697 (19) | −0.2643 (3) | 0.0711 (8) | |
| H23 | −0.0277 | 0.1340 | −0.3379 | 0.085* | |
| C24 | −0.1140 (3) | 0.2101 (2) | −0.2497 (3) | 0.0745 (9) | |
| H24 | −0.1694 | 0.2404 | −0.3140 | 0.089* | |
| C25 | −0.1190 (3) | 0.23027 (16) | −0.1420 (3) | 0.0728 (9) | |
| H25 | −0.1787 | 0.2729 | −0.1336 | 0.087* | |
| C26 | −0.0337 (3) | 0.18620 (15) | −0.0448 (3) | 0.0604 (7) | |
| H26 | −0.0350 | 0.2006 | 0.0286 | 0.072* | 0.298 (4) |
| O27B | −0.0379 (3) | 0.21092 (14) | 0.0561 (2) | 0.0703 (11) | 0.702 (4) |
| H27B | 0.0250 | 0.1872 | 0.1079 | 0.105* | 0.702 (4) |
| N1 | 0.1407 (2) | 0.09492 (12) | 0.14824 (18) | 0.0522 (5) | |
| N3 | 0.2261 (2) | 0.01277 (12) | 0.02367 (17) | 0.0499 (5) | |
| N15 | 0.3930 (2) | −0.09248 (12) | 0.08946 (17) | 0.0536 (6) | |
| O10 | 0.20328 (18) | 0.07135 (10) | 0.33851 (15) | 0.0621 (5) |
| C2 | 0.0481 (15) | 0.0410 (14) | 0.0520 (16) | −0.0057 (12) | 0.0137 (12) | −0.0011 (12) |
| C4 | 0.0432 (14) | 0.0424 (14) | 0.0499 (15) | −0.0060 (12) | 0.0107 (12) | −0.0062 (12) |
| C5 | 0.0486 (15) | 0.0474 (15) | 0.0501 (16) | 0.0009 (12) | 0.0083 (12) | −0.0074 (12) |
| C6 | 0.0749 (19) | 0.0566 (18) | 0.0548 (18) | −0.0014 (14) | 0.0110 (15) | −0.0021 (15) |
| C7 | 0.095 (2) | 0.071 (2) | 0.0508 (18) | −0.0174 (19) | 0.0165 (16) | 0.0041 (15) |
| C8 | 0.082 (2) | 0.093 (2) | 0.055 (2) | −0.0225 (19) | 0.0271 (17) | −0.0147 (18) |
| C9 | 0.0647 (19) | 0.073 (2) | 0.0583 (19) | −0.0039 (15) | 0.0189 (15) | −0.0157 (16) |
| C11 | 0.0454 (14) | 0.0373 (13) | 0.0461 (15) | −0.0035 (11) | 0.0099 (12) | −0.0056 (11) |
| C12 | 0.0515 (15) | 0.0461 (15) | 0.0446 (15) | −0.0074 (13) | 0.0061 (12) | −0.0082 (12) |
| C13 | 0.0559 (16) | 0.0523 (16) | 0.0424 (15) | −0.0050 (13) | 0.0082 (13) | −0.0069 (13) |
| C14 | 0.0527 (15) | 0.0434 (14) | 0.0469 (15) | −0.0046 (12) | 0.0139 (12) | −0.0095 (12) |
| C16 | 0.080 (2) | 0.0724 (19) | 0.0500 (17) | 0.0152 (16) | 0.0138 (14) | −0.0087 (14) |
| C17 | 0.084 (2) | 0.0658 (19) | 0.0637 (19) | 0.0169 (16) | 0.0171 (16) | −0.0174 (15) |
| C18 | 0.085 (2) | 0.080 (2) | 0.081 (2) | 0.0266 (18) | 0.0185 (18) | −0.0180 (17) |
| C19 | 0.0648 (19) | 0.087 (2) | 0.072 (2) | 0.0243 (17) | 0.0071 (15) | −0.0029 (17) |
| C20 | 0.0479 (16) | 0.075 (2) | 0.0596 (17) | −0.0004 (14) | 0.0144 (13) | −0.0148 (14) |
| C21 | 0.0495 (15) | 0.0381 (14) | 0.0547 (16) | −0.0058 (12) | 0.0117 (12) | 0.0047 (12) |
| C22 | 0.0549 (17) | 0.0660 (19) | 0.0544 (18) | −0.0102 (15) | 0.0121 (14) | 0.0054 (15) |
| O27A | 0.057 (4) | 0.109 (6) | 0.061 (4) | 0.019 (4) | 0.017 (3) | 0.009 (4) |
| C23 | 0.0653 (19) | 0.079 (2) | 0.0622 (19) | −0.0111 (17) | 0.0115 (15) | 0.0125 (17) |
| C24 | 0.070 (2) | 0.070 (2) | 0.069 (2) | −0.0155 (17) | 0.0042 (16) | 0.0223 (17) |
| C25 | 0.0633 (19) | 0.0512 (18) | 0.092 (2) | 0.0057 (14) | 0.0092 (17) | 0.0127 (17) |
| C26 | 0.0659 (18) | 0.0452 (16) | 0.0648 (19) | −0.0019 (14) | 0.0146 (15) | 0.0029 (14) |
| O27B | 0.083 (2) | 0.0662 (18) | 0.061 (2) | 0.0287 (14) | 0.0220 (14) | 0.0006 (14) |
| N1 | 0.0570 (13) | 0.0442 (12) | 0.0518 (13) | 0.0029 (10) | 0.0132 (10) | −0.0018 (10) |
| N3 | 0.0503 (12) | 0.0461 (12) | 0.0507 (13) | 0.0030 (10) | 0.0132 (10) | −0.0030 (10) |
| N15 | 0.0529 (13) | 0.0540 (13) | 0.0486 (13) | 0.0093 (10) | 0.0097 (10) | −0.0106 (10) |
| O10 | 0.0786 (13) | 0.0545 (11) | 0.0527 (11) | 0.0138 (9) | 0.0208 (9) | −0.0054 (9) |
| C2—N3 | 1.326 (3) | C17—C18 | 1.509 (4) |
| C2—N1 | 1.341 (3) | C17—H17A | 0.9700 |
| C2—C21 | 1.479 (3) | C17—H17B | 0.9700 |
| C4—N3 | 1.349 (3) | C18—C19 | 1.517 (3) |
| C4—N15 | 1.368 (3) | C18—H18A | 0.9700 |
| C4—C11 | 1.416 (3) | C18—H18B | 0.9700 |
| C5—C12 | 1.495 (3) | C19—C20 | 1.504 (3) |
| C5—C11 | 1.504 (3) | C19—H19A | 0.9700 |
| C5—H5A | 0.9700 | C19—H19B | 0.9700 |
| C5—H5B | 0.9700 | C20—N15 | 1.458 (3) |
| C6—C7 | 1.379 (4) | C20—H20A | 0.9700 |
| C6—C12 | 1.387 (3) | C20—H20B | 0.9700 |
| C6—H6 | 0.9300 | C21—C26 | 1.388 (3) |
| C7—C8 | 1.371 (4) | C21—C22 | 1.395 (3) |
| C7—H7 | 0.9300 | C22—O27A | 1.220 (5) |
| C8—C9 | 1.373 (4) | C22—C23 | 1.378 (3) |
| C8—H8 | 0.9300 | C22—H22 | 0.9300 |
| C9—C13 | 1.379 (3) | O27A—H27A | 0.8200 |
| C9—H9 | 0.9300 | C23—C24 | 1.357 (4) |
| C11—C14 | 1.372 (3) | C23—H23 | 0.9300 |
| C12—C13 | 1.371 (3) | C24—C25 | 1.371 (4) |
| C13—O10 | 1.394 (3) | C24—H24 | 0.9300 |
| C14—N1 | 1.338 (3) | C25—C26 | 1.397 (4) |
| C14—O10 | 1.370 (3) | C25—H25 | 0.9300 |
| C16—N15 | 1.467 (3) | C26—O27B | 1.309 (3) |
| C16—C17 | 1.503 (3) | C26—H26 | 0.9300 |
| C16—H16A | 0.9700 | O27B—H27B | 0.8200 |
| C16—H16B | 0.9700 | ||
| N3—C2—N1 | 125.1 (2) | C17—C18—C19 | 109.9 (2) |
| N3—C2—C21 | 118.0 (2) | C17—C18—H18A | 109.7 |
| N1—C2—C21 | 116.9 (2) | C19—C18—H18A | 109.7 |
| N3—C4—N15 | 116.3 (2) | C17—C18—H18B | 109.7 |
| N3—C4—C11 | 120.8 (2) | C19—C18—H18B | 109.7 |
| N15—C4—C11 | 122.8 (2) | H18A—C18—H18B | 108.2 |
| C12—C5—C11 | 111.9 (2) | C20—C19—C18 | 110.4 (2) |
| C12—C5—H5A | 109.2 | C20—C19—H19A | 109.6 |
| C11—C5—H5A | 109.2 | C18—C19—H19A | 109.6 |
| C12—C5—H5B | 109.2 | C20—C19—H19B | 109.6 |
| C11—C5—H5B | 109.2 | C18—C19—H19B | 109.6 |
| H5A—C5—H5B | 107.9 | H19A—C19—H19B | 108.1 |
| C7—C6—C12 | 121.5 (3) | N15—C20—C19 | 110.3 (2) |
| C7—C6—H6 | 119.2 | N15—C20—H20A | 109.6 |
| C12—C6—H6 | 119.2 | C19—C20—H20A | 109.6 |
| C8—C7—C6 | 120.0 (3) | N15—C20—H20B | 109.6 |
| C8—C7—H7 | 120.0 | C19—C20—H20B | 109.6 |
| C6—C7—H7 | 120.0 | H20A—C20—H20B | 108.1 |
| C7—C8—C9 | 120.0 (3) | C26—C21—C22 | 117.6 (2) |
| C7—C8—H8 | 120.0 | C26—C21—C2 | 122.1 (2) |
| C9—C8—H8 | 120.0 | C22—C21—C2 | 120.3 (2) |
| C8—C9—C13 | 118.9 (3) | O27A—C22—C23 | 114.5 (4) |
| C8—C9—H9 | 120.5 | O27A—C22—C21 | 123.7 (4) |
| C13—C9—H9 | 120.5 | C23—C22—C21 | 121.8 (3) |
| C14—C11—C4 | 114.4 (2) | C23—C22—H22 | 119.1 |
| C14—C11—C5 | 119.7 (2) | C21—C22—H22 | 119.1 |
| C4—C11—C5 | 125.7 (2) | C22—O27A—H27A | 109.5 |
| C13—C12—C6 | 116.7 (2) | C24—C23—C22 | 119.3 (3) |
| C13—C12—C5 | 121.2 (2) | C24—C23—H23 | 120.4 |
| C6—C12—C5 | 122.1 (2) | C22—C23—H23 | 120.4 |
| C12—C13—C9 | 122.9 (3) | C23—C24—C25 | 121.3 (3) |
| C12—C13—O10 | 121.5 (2) | C23—C24—H24 | 119.3 |
| C9—C13—O10 | 115.6 (2) | C25—C24—H24 | 119.3 |
| N1—C14—O10 | 110.9 (2) | C24—C25—C26 | 119.5 (3) |
| N1—C14—C11 | 125.8 (2) | C24—C25—H25 | 120.2 |
| O10—C14—C11 | 123.3 (2) | C26—C25—H25 | 120.2 |
| N15—C16—C17 | 110.1 (2) | O27B—C26—C21 | 122.8 (3) |
| N15—C16—H16A | 109.6 | O27B—C26—C25 | 116.7 (3) |
| C17—C16—H16A | 109.6 | C21—C26—C25 | 120.5 (3) |
| N15—C16—H16B | 109.6 | C21—C26—H26 | 119.8 |
| C17—C16—H16B | 109.6 | C25—C26—H26 | 119.8 |
| H16A—C16—H16B | 108.2 | C26—O27B—H27B | 109.5 |
| C16—C17—C18 | 112.5 (2) | C14—N1—C2 | 115.1 (2) |
| C16—C17—H17A | 109.1 | C2—N3—C4 | 118.7 (2) |
| C18—C17—H17A | 109.1 | C4—N15—C20 | 122.37 (19) |
| C16—C17—H17B | 109.1 | C4—N15—C16 | 119.1 (2) |
| C18—C17—H17B | 109.1 | C20—N15—C16 | 111.89 (19) |
| H17A—C17—H17B | 107.8 | C14—O10—C13 | 117.75 (19) |
| C12—C6—C7—C8 | 0.4 (4) | C26—C21—C22—C23 | 1.1 (2) |
| C6—C7—C8—C9 | −0.4 (4) | C2—C21—C22—C23 | −178.3 (2) |
| C7—C8—C9—C13 | 0.6 (4) | O27A—C22—C23—C24 | 179.2 (2) |
| N3—C4—C11—C14 | −1.7 (3) | C21—C22—C23—C24 | −1.3 (3) |
| N15—C4—C11—C14 | −178.1 (2) | C22—C23—C24—C25 | 0.0 (4) |
| N3—C4—C11—C5 | 173.0 (2) | C23—C24—C25—C26 | 1.4 (4) |
| N15—C4—C11—C5 | −3.4 (4) | C22—C21—C26—O27B | −177.9 (2) |
| C12—C5—C11—C14 | 15.2 (3) | C2—C21—C26—O27B | 1.5 (3) |
| C12—C5—C11—C4 | −159.2 (2) | C22—C21—C26—C25 | 0.3 (3) |
| C7—C6—C12—C13 | −0.6 (4) | C2—C21—C26—C25 | 179.8 (2) |
| C7—C6—C12—C5 | 178.7 (2) | C24—C25—C26—O27B | 176.8 (2) |
| C11—C5—C12—C13 | −17.3 (3) | C24—C25—C26—C21 | −1.5 (4) |
| C11—C5—C12—C6 | 163.5 (2) | O10—C14—N1—C2 | −175.57 (18) |
| C6—C12—C13—C9 | 0.8 (4) | C11—C14—N1—C2 | 3.3 (3) |
| C5—C12—C13—C9 | −178.4 (2) | N3—C2—N1—C14 | −2.0 (3) |
| C6—C12—C13—O10 | −178.6 (2) | C21—C2—N1—C14 | 178.36 (19) |
| C5—C12—C13—O10 | 2.1 (3) | N1—C2—N3—C4 | −0.9 (3) |
| C8—C9—C13—C12 | −0.8 (4) | C21—C2—N3—C4 | 178.68 (18) |
| C8—C9—C13—O10 | 178.7 (2) | N15—C4—N3—C2 | 179.44 (19) |
| C4—C11—C14—N1 | −1.5 (3) | C11—C4—N3—C2 | 2.9 (3) |
| C5—C11—C14—N1 | −176.5 (2) | N3—C4—N15—C20 | 137.0 (2) |
| C4—C11—C14—O10 | 177.2 (2) | C11—C4—N15—C20 | −46.5 (3) |
| C5—C11—C14—O10 | 2.2 (3) | N3—C4—N15—C16 | −12.1 (3) |
| N15—C16—C17—C18 | −54.4 (3) | C11—C4—N15—C16 | 164.4 (2) |
| C16—C17—C18—C19 | 53.0 (3) | C19—C20—N15—C4 | 148.4 (2) |
| C17—C18—C19—C20 | −54.2 (3) | C19—C20—N15—C16 | −60.5 (3) |
| C18—C19—C20—N15 | 58.2 (3) | C17—C16—N15—C4 | −149.8 (2) |
| N3—C2—C21—C26 | −179.10 (19) | C17—C16—N15—C20 | 58.0 (3) |
| N1—C2—C21—C26 | 0.6 (3) | N1—C14—O10—C13 | 160.0 (2) |
| N3—C2—C21—C22 | 0.4 (3) | C11—C14—O10—C13 | −18.9 (3) |
| N1—C2—C21—C22 | −179.98 (17) | C12—C13—O10—C14 | 16.6 (3) |
| C26—C21—C22—O27A | −179.45 (14) | C9—C13—O10—C14 | −162.9 (2) |
| C2—C21—C22—O27A | 1.1 (2) |
| H··· | ||||
| O27 | 0.82 | 1.78 | 2.535 (3) | 151 |
| O27 | 0.82 | 1.83 | 2.551 (3) | 146 |
| C5—H5 | 0.97 | 2.67 | 3.59 | 159 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C6–C9/C12/C13 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O27 | 0.82 | 1.78 | 2.535 (3) | 151 |
| O27 | 0.82 | 1.83 | 2.551 (3) | 146 |
| C5—H5 | 0.97 | 2.67 | 3.59 | 159 |
Symmetry code: (i) .