Literature DB >> 24826117

Glycinium 3-carb-oxy-4-hy-droxy-benzene-sulfonate.

A Thirunavukkarasu1, A Silambarasan1, R Mohan Kumar1, P R Umarani2, G Chakkaravarthi3.   

Abstract

In the anion of the title salt, C2H6NO2 (+)·C7H5O6S(-), the dihedral angle between the carb-oxy-lic acid group and the benzene ring is 5.02 (12)°. In the crystal, the anions are linked into inversion dimers through pairs of O-H⋯O hydrogen bonds between the carb-oxy-lic acid groups and sulfonate O atoms. A pair of C-H⋯O inter-actions is also observed within each dimer. The anion dimers and the cations are linked into a three-dimensional network by N-H⋯O, O-H⋯O and C-H⋯O hydrogen bonds.

Entities:  

Year:  2014        PMID: 24826117      PMCID: PMC3998566          DOI: 10.1107/S1600536814004590

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to non-linear optical materials, see: Yang et al. (2005 ▶); Kumar et al. (2009 ▶). For related structures, see: Krishnakumar et al. (2012 ▶); Sudhahar et al. (2013 ▶).

Experimental

Crystal data

C2H6NO2C7H5O6S M = 293.25 Monoclinic, a = 5.3651 (3) Å b = 24.7207 (15) Å c = 8.6840 (5) Å β = 90.170 (2)° V = 1151.75 (12) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 295 K 0.36 × 0.32 × 0.30 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.893, T max = 0.910 21406 measured reflections 3694 independent reflections 3282 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.117 S = 1.20 3694 reflections 197 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.49 e Å−3 Δρmin = −0.53 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814004590/is5343sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814004590/is5343Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814004590/is5343Isup3.cml CCDC reference: 989106 Additional supporting information: crystallographic information; 3D view; checkCIF report
C2H6NO2+·C7H5O6SF(000) = 608
Mr = 293.25Dx = 1.691 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9634 reflections
a = 5.3651 (3) Åθ = 2.5–32.0°
b = 24.7207 (15) ŵ = 0.32 mm1
c = 8.6840 (5) ÅT = 295 K
β = 90.170 (2)°Block, colourless
V = 1151.75 (12) Å30.36 × 0.32 × 0.30 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3694 independent reflections
Radiation source: fine-focus sealed tube3282 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
ω and φ scanθmax = 32.1°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.893, Tmax = 0.910k = −36→36
21406 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.117w = 1/[σ2(Fo2) + (0.0325P)2 + 1.2564P] where P = (Fo2 + 2Fc2)/3
S = 1.20(Δ/σ)max < 0.001
3694 reflectionsΔρmax = 0.49 e Å3
197 parametersΔρmin = −0.53 e Å3
6 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.071 (3)
xyzUiso*/Ueq
C10.5636 (3)0.41186 (7)0.7824 (2)0.0177 (3)
C20.6669 (3)0.46042 (7)0.8273 (2)0.0194 (3)
H20.80740.46070.89030.023*
C30.5608 (3)0.50936 (7)0.7784 (2)0.0198 (3)
C40.3495 (4)0.50846 (8)0.6831 (2)0.0244 (4)
C50.2445 (4)0.45897 (8)0.6403 (3)0.0283 (4)
H50.10270.45830.57850.034*
C60.3505 (4)0.41112 (8)0.6893 (2)0.0244 (4)
H60.28010.37830.66030.029*
C70.6683 (4)0.56133 (7)0.8269 (2)0.0248 (4)
C80.8846 (4)0.69748 (7)0.6240 (2)0.0213 (3)
C90.8379 (4)0.71637 (8)0.7865 (2)0.0221 (3)
H9A0.90960.69080.85890.026*
H9B0.91660.75120.80280.026*
N10.5669 (3)0.72092 (7)0.81273 (19)0.0219 (3)
O10.2384 (3)0.55374 (7)0.6301 (2)0.0398 (4)
O20.8214 (3)0.32854 (7)0.69766 (18)0.0377 (4)
O30.5004 (3)0.31390 (6)0.88206 (18)0.0305 (3)
O40.8755 (3)0.36047 (6)0.9590 (2)0.0364 (4)
O50.8540 (3)0.55664 (6)0.9256 (2)0.0364 (4)
O60.5921 (3)0.60513 (6)0.7813 (2)0.0380 (4)
O71.1214 (3)0.68486 (8)0.60241 (19)0.0386 (4)
O80.7240 (3)0.69592 (6)0.52779 (16)0.0278 (3)
S10.70129 (8)0.349884 (16)0.83495 (5)0.01747 (12)
H1A0.489 (6)0.6942 (10)0.771 (4)0.059 (10)*
H1B0.515 (6)0.7512 (8)0.774 (4)0.059 (10)*
H1C0.528 (6)0.7171 (14)0.9088 (15)0.059 (10)*
H5A0.910 (6)0.5865 (7)0.949 (4)0.051 (9)*
H71.134 (6)0.6766 (12)0.5112 (15)0.048 (9)*
H10.320 (6)0.5791 (10)0.665 (4)0.064 (11)*
U11U22U33U12U13U23
C10.0206 (8)0.0139 (7)0.0186 (8)−0.0001 (6)−0.0015 (6)−0.0008 (6)
C20.0198 (8)0.0163 (7)0.0219 (8)−0.0006 (6)−0.0050 (6)−0.0003 (6)
C30.0229 (8)0.0147 (7)0.0218 (8)−0.0006 (6)−0.0037 (6)0.0001 (6)
C40.0261 (9)0.0201 (8)0.0270 (9)0.0030 (7)−0.0065 (7)0.0031 (7)
C50.0249 (9)0.0258 (9)0.0342 (11)0.0013 (7)−0.0141 (8)−0.0010 (8)
C60.0249 (9)0.0196 (8)0.0286 (9)−0.0025 (6)−0.0071 (7)−0.0034 (7)
C70.0292 (10)0.0161 (7)0.0291 (9)−0.0014 (6)−0.0055 (8)0.0003 (7)
C80.0271 (9)0.0181 (7)0.0186 (8)−0.0005 (6)0.0015 (7)0.0008 (6)
C90.0255 (9)0.0238 (8)0.0169 (8)−0.0034 (7)−0.0012 (6)−0.0017 (6)
N10.0278 (8)0.0198 (7)0.0181 (7)−0.0003 (6)0.0008 (6)−0.0003 (6)
O10.0426 (9)0.0232 (7)0.0534 (11)0.0065 (7)−0.0235 (8)0.0052 (7)
O20.0510 (10)0.0343 (8)0.0279 (8)0.0189 (7)0.0124 (7)0.0003 (6)
O30.0374 (8)0.0217 (6)0.0324 (8)−0.0097 (6)0.0019 (6)0.0069 (6)
O40.0463 (9)0.0209 (7)0.0419 (9)0.0003 (6)−0.0261 (8)−0.0003 (6)
O50.0452 (9)0.0190 (7)0.0449 (9)−0.0059 (6)−0.0232 (8)−0.0013 (6)
O60.0492 (10)0.0150 (6)0.0496 (10)0.0014 (6)−0.0166 (8)0.0022 (6)
O70.0282 (8)0.0602 (11)0.0274 (8)0.0057 (7)0.0009 (6)−0.0083 (7)
O80.0328 (8)0.0322 (7)0.0183 (6)0.0033 (6)−0.0035 (5)−0.0020 (5)
S10.0230 (2)0.01263 (18)0.0168 (2)−0.00042 (14)−0.00211 (14)−0.00052 (13)
C1—C21.378 (2)C8—O71.322 (2)
C1—C61.399 (3)C8—C91.508 (3)
C1—S11.7605 (17)C9—N11.477 (3)
C2—C31.402 (2)C9—H9A0.9700
C2—H20.9300C9—H9B0.9700
C3—C41.402 (3)N1—H1A0.863 (10)
C3—C71.470 (2)N1—H1B0.866 (10)
C4—O11.348 (2)N1—H1C0.865 (10)
C4—C51.397 (3)O1—H10.823 (10)
C5—C61.379 (3)O2—S11.4559 (15)
C5—H50.9300O3—S11.4570 (14)
C6—H60.9300O4—S11.4478 (15)
C7—O61.223 (2)O5—H5A0.822 (10)
C7—O51.317 (2)O7—H70.821 (10)
C8—O81.199 (2)
C2—C1—C6120.16 (16)O7—C8—C9111.59 (17)
C2—C1—S1121.11 (13)N1—C9—C8109.53 (15)
C6—C1—S1118.69 (13)N1—C9—H9A109.8
C1—C2—C3120.21 (16)C8—C9—H9A109.8
C1—C2—H2119.9N1—C9—H9B109.8
C3—C2—H2119.9C8—C9—H9B109.8
C4—C3—C2119.48 (16)H9A—C9—H9B108.2
C4—C3—C7119.94 (16)C9—N1—H1A111 (2)
C2—C3—C7120.58 (16)C9—N1—H1B109 (2)
O1—C4—C5117.33 (17)H1A—N1—H1B110 (3)
O1—C4—C3122.96 (17)C9—N1—H1C112 (2)
C5—C4—C3119.71 (17)H1A—N1—H1C102 (3)
C6—C5—C4120.24 (18)H1B—N1—H1C113 (3)
C6—C5—H5119.9C4—O1—H1106 (3)
C4—C5—H5119.9C7—O5—H5A111 (2)
C5—C6—C1120.18 (17)C8—O7—H7106 (2)
C5—C6—H6119.9O4—S1—O2112.85 (11)
C1—C6—H6119.9O4—S1—O3112.21 (10)
O6—C7—O5122.70 (18)O2—S1—O3109.77 (10)
O6—C7—C3123.42 (18)O4—S1—C1107.75 (8)
O5—C7—C3113.88 (16)O2—S1—C1106.85 (9)
O8—C8—O7125.65 (18)O3—S1—C1107.09 (9)
O8—C8—C9122.73 (18)
C6—C1—C2—C3−0.8 (3)C4—C3—C7—O6−4.4 (3)
S1—C1—C2—C3177.08 (14)C2—C3—C7—O6175.9 (2)
C1—C2—C3—C4−0.2 (3)C4—C3—C7—O5175.01 (19)
C1—C2—C3—C7179.42 (18)C2—C3—C7—O5−4.7 (3)
C2—C3—C4—O1−179.32 (19)O8—C8—C9—N111.5 (2)
C7—C3—C4—O11.0 (3)O7—C8—C9—N1−170.32 (16)
C2—C3—C4—C51.2 (3)C2—C1—S1—O416.02 (18)
C7—C3—C4—C5−178.49 (19)C6—C1—S1—O4−166.12 (16)
O1—C4—C5—C6179.4 (2)C2—C1—S1—O2−105.50 (17)
C3—C4—C5—C6−1.1 (3)C6—C1—S1—O272.36 (17)
C4—C5—C6—C10.1 (3)C2—C1—S1—O3136.93 (15)
C2—C1—C6—C50.8 (3)C6—C1—S1—O3−45.21 (17)
S1—C1—C6—C5−177.06 (16)
D—H···AD—HH···AD···AD—H···A
O1—H1···O60.82 (1)1.89 (2)2.631 (2)150 (4)
N1—H1A···O60.86 (1)2.27 (3)2.878 (2)127 (3)
N1—H1A···O7i0.86 (1)2.46 (3)3.134 (2)135 (3)
N1—H1B···O3ii0.87 (1)2.06 (2)2.876 (2)157 (3)
N1—H1C···O3iii0.87 (1)1.98 (2)2.811 (2)161 (3)
O5—H5A···O4iv0.82 (1)1.92 (2)2.702 (2)159 (3)
O7—H7···O2v0.82 (1)1.84 (1)2.646 (2)169 (3)
C2—H2···O5iv0.932.453.370 (2)168
C9—H9A···O4iv0.972.333.292 (2)172
C6—H6···O8vi0.932.463.273 (2)147
C9—H9B···O2vii0.972.373.324 (2)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O60.82 (1)1.89 (2)2.631 (2)150 (4)
N1—H1A⋯O60.86 (1)2.27 (3)2.878 (2)127 (3)
N1—H1A⋯O7i 0.86 (1)2.46 (3)3.134 (2)135 (3)
N1—H1B⋯O3ii 0.87 (1)2.06 (2)2.876 (2)157 (3)
N1—H1C⋯O3iii 0.87 (1)1.98 (2)2.811 (2)161 (3)
O5—H5A⋯O4iv 0.82 (1)1.92 (2)2.702 (2)159 (3)
O7—H7⋯O2v 0.82 (1)1.84 (1)2.646 (2)169 (3)
C2—H2⋯O5iv 0.932.453.370 (2)168
C9—H9A⋯O4iv 0.972.333.292 (2)172
C6—H6⋯O8vi 0.932.463.273 (2)147
C9—H9B⋯O2vii 0.972.373.324 (2)167

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  4-Methyl-pyridinium 4-hy-droxy-benzoate.

Authors:  S Sudhahar; M Krishnakumar; B M Sornamurthy; G Chakkaravarthi; R Mohankumar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-01-23

3.  1-Methyl-4-(4-methylstyryl)pyridinium 4-methylbenzenesulfonate.

Authors:  M Krishnakumar; S Sudhahar; A Silambarasan; G Chakkaravarthi; R Mohankumar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-03

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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