Literature DB >> 24826098

Bis{2-[(pyridin-2-yl)methyl-idene-amino]-benzoato-κ(3) N,N',O}chromium(III) nitrate monohydrate.

Elena A Buvaylo1, Vladimir N Kokozay1, Olga Yu Vassilyeva1, Brian W Skelton2.   

Abstract

The title complex salt hydrate, [Cr(C13H9N2O2)2]NO3·H2O, comprises discrete cations, nitrate anions and solvent water mol-ecules. The Cr(III) atom is octa-hedrally coordinated by two anionic Schiff base ligands with the O atoms being cis. The two ligands differ significantly with dihedral angles between the pyridine and benzene rings of 4.8 (2) and 24.9 (2)°. The nitrate anion and solvent water mol-ecule were modelled as being disordered, with the major components having site-occupancy values of 0.856 (14) and 0.727 (16), respectively. The crystal is built of alternating layers of cations and of anions plus water mol-ecules, stacked along the c axis.

Entities:  

Year:  2014        PMID: 24826098      PMCID: PMC3998614          DOI: 10.1107/S1600536814005649

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the Schiff base ligand and the structures of its complexes, see: Dey et al. (2003 ▶), Mukhopadhyay & Pal (2005 ▶); Sen et al. (2006 ▶).

Experimental

Crystal data

[Cr(C13H9N2O2)2]NO3·H2O M = 582.47 Triclinic, a = 7.9131 (11) Å b = 11.4929 (15) Å c = 13.5627 (18) Å α = 86.105 (11)° β = 79.290 (11)° γ = 85.566 (11)° V = 1206.5 (3) Å3 Z = 2 Cu Kα radiation μ = 4.47 mm−1 T = 100 K 0.11 × 0.05 × 0.03 mm

Data collection

Oxford Diffraction Gemini diffractometer Absorption correction: analytical (Clark & Reid, 1995 ▶) T min = 0.681, T max = 0.892 9601 measured reflections 4251 independent reflections 2790 reflections with I > 2σ(I) R int = 0.083

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.136 S = 0.99 4251 reflections 379 parameters H-atom parameters constrained Δρmax = 0.43 e Å−3 Δρmin = −0.27 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814005649/tk5300sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814005649/tk5300Isup2.hkl CCDC reference: 991354 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Cr(C13H9N2O2)2]NO3·H2OZ = 2
Mr = 582.47F(000) = 598
Triclinic, P1Dx = 1.603 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54178 Å
a = 7.9131 (11) ÅCell parameters from 1206 reflections
b = 11.4929 (15) Åθ = 3.3–67.2°
c = 13.5627 (18) ŵ = 4.47 mm1
α = 86.105 (11)°T = 100 K
β = 79.290 (11)°Rod, red-brown
γ = 85.566 (11)°0.11 × 0.05 × 0.03 mm
V = 1206.5 (3) Å3
Oxford Diffraction Gemini diffractometer4251 independent reflections
Graphite monochromator2790 reflections with I > 2σ(I)
Detector resolution: 10.4738 pixels mm-1Rint = 0.083
ω scansθmax = 67.0°, θmin = 3.3°
Absorption correction: analytical (Clark & Reid, 1995)h = −9→9
Tmin = 0.681, Tmax = 0.892k = −11→13
9601 measured reflectionsl = −10→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.136H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0496P)2] where P = (Fo2 + 2Fc2)/3
4251 reflections(Δ/σ)max = 0.002
379 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.The nitrate anion and solvent water molecule were modelled as being disordered. The site occupancy factors of the two components of the nitrate refined to 0.856 (14) and its complement. Those for the two components of the disordered water molecule appeared to be significantly different and were refined to 0.727 (16) and its complement. Minor components of the disordered atoms were refined with isotropic displacement parameters. Water molecule hydrogen atoms were not located.
xyzUiso*/UeqOcc. (<1)
Cr10.54166 (9)0.74547 (6)0.61375 (5)0.0373 (2)
N110.7561 (4)0.6436 (3)0.6386 (2)0.0358 (8)
C120.7217 (6)0.5754 (4)0.7256 (3)0.0413 (10)
C130.8463 (6)0.4967 (4)0.7569 (3)0.0477 (11)
H130.8210.45090.81820.057*
C141.0056 (6)0.4866 (4)0.6976 (3)0.0491 (11)
H141.09160.43190.71670.059*
C151.0425 (6)0.5553 (4)0.6101 (3)0.0452 (10)
H151.15390.54990.56920.054*
C160.9120 (5)0.6332 (4)0.5828 (3)0.0382 (9)
H160.93620.68030.52220.046*
C100.5485 (6)0.5899 (4)0.7818 (3)0.0437 (10)
H100.51670.54730.84420.052*
N100.4359 (4)0.6618 (3)0.7463 (2)0.0385 (8)
C210.1464 (6)0.7587 (4)0.7554 (3)0.0445 (10)
C220.2644 (6)0.6824 (4)0.7983 (3)0.0442 (10)
C230.2101 (6)0.6264 (5)0.8926 (3)0.0585 (13)
H230.28780.57340.92150.07*
C240.0447 (7)0.6481 (6)0.9433 (3)0.0738 (17)
H240.01010.61011.00750.089*
C25−0.0730 (7)0.7238 (6)0.9031 (4)0.0772 (19)
H25−0.18720.73810.93870.093*
C26−0.0193 (6)0.7777 (5)0.8101 (4)0.0597 (13)
H26−0.09870.83010.7820.072*
C200.1775 (6)0.8256 (4)0.6544 (3)0.0457 (10)
O210.3303 (4)0.8357 (3)0.6057 (2)0.0465 (7)
O220.0532 (4)0.8712 (3)0.6203 (3)0.0635 (9)
N310.6119 (5)0.8854 (3)0.6813 (2)0.0418 (8)
C320.6966 (6)0.9635 (4)0.6123 (3)0.0467 (11)
C330.7415 (6)1.0696 (4)0.6378 (4)0.0548 (12)
H330.79881.12240.5880.066*
C340.7011 (7)1.0973 (4)0.7376 (4)0.0619 (14)
H340.7321.16920.75760.074*
C350.6163 (7)1.0201 (5)0.8070 (4)0.0620 (14)
H350.58751.03840.87560.074*
C360.5720 (6)0.9140 (4)0.7769 (3)0.0538 (12)
H360.51230.86120.82570.065*
C300.7297 (6)0.9282 (4)0.5101 (3)0.0449 (10)
H300.79330.97520.45810.054*
N300.6723 (4)0.8323 (3)0.4901 (2)0.0397 (8)
C410.5867 (5)0.7161 (4)0.3666 (3)0.0399 (10)
C420.6963 (5)0.7961 (4)0.3896 (3)0.0419 (10)
C430.8237 (6)0.8424 (4)0.3149 (3)0.0547 (12)
H430.90.89480.33160.066*
C440.8384 (7)0.8117 (5)0.2164 (3)0.0623 (14)
H440.92610.8420.16580.075*
C450.7261 (7)0.7375 (5)0.1919 (3)0.0571 (13)
H450.73420.71870.1240.069*
C460.6018 (6)0.6903 (4)0.2656 (3)0.0485 (11)
H460.5250.63930.24760.058*
C400.4502 (6)0.6555 (4)0.4412 (3)0.0415 (10)
O410.4786 (4)0.6332 (2)0.53221 (18)0.0402 (7)
O420.3241 (4)0.6254 (3)0.4119 (2)0.0503 (8)
N10.4349 (7)0.7154 (5)1.0410 (3)0.0656 (12)
O110.5173 (8)0.6206 (5)1.0362 (4)0.078 (2)0.856 (14)
O120.2875 (9)0.7275 (7)1.0988 (3)0.078 (2)0.856 (14)
O130.4921 (9)0.8027 (4)0.9909 (3)0.0713 (17)0.856 (14)
O140.354 (3)0.668 (2)1.1045 (15)0.031 (7)*0.144 (14)
O150.561 (5)0.656 (4)0.982 (3)0.089 (12)*0.144 (14)
O160.389 (7)0.816 (4)0.995 (3)0.092 (12)*0.144 (14)
O10.1743 (16)0.9903 (10)0.9800 (8)0.185 (6)0.727 (16)
O20.129 (2)0.9116 (18)1.0468 (15)0.100 (8)*0.273 (16)
U11U22U33U12U13U23
Cr10.0381 (4)0.0373 (4)0.0385 (3)0.0040 (3)−0.0158 (3)0.0012 (3)
N110.037 (2)0.0369 (19)0.0365 (16)0.0042 (15)−0.0163 (15)−0.0046 (14)
C120.046 (3)0.040 (2)0.040 (2)0.003 (2)−0.0167 (19)−0.0007 (18)
C130.055 (3)0.047 (3)0.043 (2)0.010 (2)−0.021 (2)0.0056 (19)
C140.048 (3)0.049 (3)0.052 (2)0.016 (2)−0.025 (2)0.000 (2)
C150.040 (2)0.048 (3)0.050 (2)0.005 (2)−0.0144 (19)−0.011 (2)
C160.044 (3)0.036 (2)0.0366 (19)−0.0026 (18)−0.0126 (18)0.0002 (17)
C100.054 (3)0.043 (2)0.0354 (19)−0.002 (2)−0.0125 (19)0.0000 (18)
N100.040 (2)0.040 (2)0.0370 (16)0.0031 (16)−0.0134 (15)−0.0011 (15)
C210.041 (2)0.049 (3)0.047 (2)0.005 (2)−0.0178 (19)−0.013 (2)
C220.045 (3)0.056 (3)0.034 (2)−0.005 (2)−0.0132 (18)−0.0095 (19)
C230.047 (3)0.091 (4)0.039 (2)0.004 (3)−0.015 (2)−0.004 (2)
C240.052 (3)0.133 (6)0.036 (2)−0.003 (3)−0.008 (2)0.003 (3)
C250.045 (3)0.136 (6)0.050 (3)0.012 (3)−0.011 (2)−0.024 (3)
C260.045 (3)0.078 (4)0.061 (3)0.003 (3)−0.020 (2)−0.019 (3)
C200.041 (3)0.034 (2)0.067 (3)−0.0011 (19)−0.022 (2)−0.006 (2)
O210.0393 (18)0.0467 (18)0.0559 (16)0.0077 (14)−0.0209 (14)0.0026 (14)
O220.0394 (18)0.057 (2)0.094 (2)0.0046 (16)−0.0276 (17)0.0244 (18)
N310.043 (2)0.0366 (19)0.0499 (19)0.0056 (16)−0.0218 (16)−0.0053 (16)
C320.040 (2)0.036 (2)0.069 (3)0.006 (2)−0.028 (2)0.003 (2)
C330.045 (3)0.036 (3)0.090 (3)0.007 (2)−0.033 (2)−0.006 (2)
C340.059 (3)0.041 (3)0.096 (4)0.013 (2)−0.042 (3)−0.018 (3)
C350.066 (3)0.055 (3)0.075 (3)0.016 (3)−0.037 (3)−0.022 (3)
C360.053 (3)0.055 (3)0.058 (3)0.008 (2)−0.023 (2)−0.007 (2)
C300.040 (2)0.036 (2)0.060 (3)0.0017 (19)−0.017 (2)0.006 (2)
N300.0346 (19)0.041 (2)0.0443 (18)0.0032 (16)−0.0158 (15)0.0069 (15)
C410.036 (2)0.045 (2)0.038 (2)0.0094 (19)−0.0125 (17)0.0020 (18)
C420.035 (2)0.044 (2)0.045 (2)0.0065 (19)−0.0117 (18)0.0069 (18)
C430.043 (3)0.058 (3)0.060 (3)0.002 (2)−0.008 (2)0.007 (2)
C440.053 (3)0.074 (4)0.051 (3)0.010 (3)0.003 (2)0.012 (2)
C450.054 (3)0.070 (3)0.043 (2)0.016 (3)−0.008 (2)0.005 (2)
C460.049 (3)0.049 (3)0.046 (2)0.019 (2)−0.016 (2)−0.001 (2)
C400.043 (3)0.038 (2)0.045 (2)0.0071 (19)−0.0155 (19)−0.0049 (18)
O410.0452 (17)0.0414 (16)0.0371 (13)−0.0019 (13)−0.0171 (12)0.0030 (11)
O420.0506 (19)0.060 (2)0.0462 (15)−0.0083 (15)−0.0226 (14)0.0020 (14)
N10.085 (4)0.070 (3)0.047 (2)−0.014 (3)−0.024 (2)0.006 (2)
O110.115 (4)0.058 (3)0.068 (4)0.007 (3)−0.040 (3)0.002 (3)
O120.081 (4)0.099 (5)0.051 (2)−0.014 (4)0.001 (2)−0.014 (3)
O130.067 (4)0.077 (3)0.063 (3)0.005 (3)−0.008 (2)0.024 (2)
O10.227 (12)0.165 (10)0.144 (8)0.048 (9)−0.028 (8)0.044 (7)
Cr1—O411.907 (3)N31—C361.334 (6)
Cr1—O211.915 (3)N31—C321.369 (6)
Cr1—N302.041 (3)C32—C331.380 (6)
Cr1—N102.047 (3)C32—C301.442 (6)
Cr1—N112.053 (3)C33—C341.385 (7)
Cr1—N312.065 (3)C33—H330.95
N11—C161.323 (5)C34—C351.367 (8)
N11—C121.367 (5)C34—H340.95
C12—C131.391 (6)C35—C361.401 (7)
C12—C101.443 (6)C35—H350.95
C13—C141.365 (7)C36—H360.95
C13—H130.95C30—N301.287 (5)
C14—C151.377 (6)C30—H300.95
C14—H140.95N30—C421.427 (5)
C15—C161.400 (6)C41—C421.400 (6)
C15—H150.95C41—C461.403 (6)
C16—H160.95C41—C401.513 (6)
C10—N101.304 (5)C42—C431.398 (6)
C10—H100.95C43—C441.387 (7)
N10—C221.418 (6)C43—H430.95
C21—C261.390 (7)C44—C451.375 (8)
C21—C221.409 (6)C44—H440.95
C21—C201.513 (7)C45—C461.380 (7)
C22—C231.401 (6)C45—H450.95
C23—C241.373 (7)C46—H460.95
C23—H230.95C40—O421.222 (5)
C24—C251.386 (8)C40—O411.300 (5)
C24—H240.95N1—O141.11 (2)
C25—C261.375 (8)N1—O111.225 (7)
C25—H250.95N1—O131.239 (7)
C26—H260.95N1—O121.282 (8)
C20—O221.229 (5)N1—O151.33 (4)
C20—O211.275 (5)N1—O161.33 (4)
O41—Cr1—O2189.52 (12)O22—C20—O21120.4 (4)
O41—Cr1—N3091.12 (13)O22—C20—C21119.0 (4)
O21—Cr1—N3092.67 (13)O21—C20—C21120.6 (4)
O41—Cr1—N1094.27 (13)C20—O21—Cr1131.4 (3)
O21—Cr1—N1092.10 (14)C36—N31—C32118.1 (4)
N30—Cr1—N10172.82 (14)C36—N31—Cr1129.7 (3)
O41—Cr1—N1192.27 (12)C32—N31—Cr1111.8 (3)
O21—Cr1—N11173.61 (13)N31—C32—C33122.8 (4)
N30—Cr1—N1193.43 (14)N31—C32—C30114.8 (4)
N10—Cr1—N1181.65 (14)C33—C32—C30122.4 (5)
O41—Cr1—N31170.57 (13)C32—C33—C34118.4 (5)
O21—Cr1—N3186.65 (13)C32—C33—H33120.8
N30—Cr1—N3180.47 (14)C34—C33—H33120.8
N10—Cr1—N3194.47 (14)C35—C34—C33119.3 (5)
N11—Cr1—N3192.48 (13)C35—C34—H34120.3
C16—N11—C12118.7 (3)C33—C34—H34120.3
C16—N11—Cr1130.0 (3)C34—C35—C36120.0 (5)
C12—N11—Cr1111.3 (3)C34—C35—H35120
N11—C12—C13121.7 (4)C36—C35—H35120
N11—C12—C10115.7 (4)N31—C36—C35121.4 (5)
C13—C12—C10122.6 (4)N31—C36—H36119.3
C14—C13—C12118.5 (4)C35—C36—H36119.3
C14—C13—H13120.7N30—C30—C32119.4 (4)
C12—C13—H13120.7N30—C30—H30120.3
C13—C14—C15120.4 (4)C32—C30—H30120.3
C13—C14—H14119.8C30—N30—C42121.3 (4)
C15—C14—H14119.8C30—N30—Cr1113.3 (3)
C14—C15—C16118.4 (4)C42—N30—Cr1125.3 (3)
C14—C15—H15120.8C42—C41—C46117.7 (4)
C16—C15—H15120.8C42—C41—C40125.8 (3)
N11—C16—C15122.3 (4)C46—C41—C40116.5 (4)
N11—C16—H16118.9C43—C42—C41120.7 (4)
C15—C16—H16118.9C43—C42—N30120.6 (4)
N10—C10—C12119.5 (4)C41—C42—N30118.7 (4)
N10—C10—H10120.2C44—C43—C42119.8 (5)
C12—C10—H10120.2C44—C43—H43120.1
C10—N10—C22122.7 (4)C42—C43—H43120.1
C10—N10—Cr1111.8 (3)C45—C44—C43120.1 (5)
C22—N10—Cr1125.4 (3)C45—C44—H44119.9
C26—C21—C22118.3 (4)C43—C44—H44119.9
C26—C21—C20114.1 (4)C44—C45—C46120.3 (4)
C22—C21—C20127.6 (4)C44—C45—H45119.9
C23—C22—C21119.2 (4)C46—C45—H45119.9
C23—C22—N10120.3 (4)C45—C46—C41121.3 (5)
C21—C22—N10120.5 (4)C45—C46—H46119.4
C24—C23—C22120.1 (5)C41—C46—H46119.4
C24—C23—H23120O42—C40—O41123.6 (4)
C22—C23—H23120O42—C40—C41118.6 (4)
C23—C24—C25121.7 (5)O41—C40—C41117.6 (4)
C23—C24—H24119.2C40—O41—Cr1124.6 (3)
C25—C24—H24119.2O11—N1—O13121.1 (6)
C26—C25—C24117.9 (5)O11—N1—O12120.9 (6)
C26—C25—H25121O13—N1—O12118.0 (6)
C24—C25—H25121O14—N1—O15119 (2)
C25—C26—C21122.7 (5)O14—N1—O16126 (2)
C25—C26—H26118.6O15—N1—O16111 (2)
C21—C26—H26118.6
Table 1

Selected bond lengths (Å)

Cr1—O411.907 (3)
Cr1—O211.915 (3)
Cr1—N302.041 (3)
Cr1—N102.047 (3)
Cr1—N112.053 (3)
Cr1—N312.065 (3)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A quasi-tetrahedral Cu4 cluster and a helical-chain copper (II) complex with single syn-anti carboxylate bridges: crystal structure and magnetic properties.

Authors:  Subrata Kumar Dey; Bappaditya Bag; K M Abdul Malik; M Salah El Fallah; Joan Ribas; Samiran Mitra
Journal:  Inorg Chem       Date:  2003-06-30       Impact factor: 5.165

  2 in total
  1 in total

1.  Crystal structure of bis-(2-{[(pyridin-2-yl)methyl-idene]amino}-benzoato-κ(3) N,N',O)cobalt(II) N,N-di-methyl-formamide sesquisolvate.

Authors:  Elena A Buvaylo; Vladimir N Kokozay; Olga Yu Vassilyeva; Brian W Skelton
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-09-06
  1 in total

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