Literature DB >> 2482415

Phylogenetic comparative analysis of RNA secondary structure.

B D James, G J Olsen, N R Pace.   

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Year:  1989        PMID: 2482415     DOI: 10.1016/0076-6879(89)80104-1

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


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  31 in total

1.  Predicting oligonucleotide affinity to nucleic acid targets.

Authors:  D H Mathews; M E Burkard; S M Freier; J R Wyatt; D H Turner
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

2.  Tracing the evolution of RNA structure in ribosomes.

Authors:  Gustavo Caetano-Anollés
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

3.  Specificity of RNA-RNA helix recognition.

Authors:  Daniel J Battle; Jennifer A Doudna
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-20       Impact factor: 11.205

4.  A comparative method for finding and folding RNA secondary structures within protein-coding regions.

Authors:  Jakob Skou Pedersen; Irmtraud Margret Meyer; Roald Forsberg; Peter Simmonds; Jotun Hein
Journal:  Nucleic Acids Res       Date:  2004-09-24       Impact factor: 16.971

5.  Computational approaches for RNA energy parameter estimation.

Authors:  Mirela Andronescu; Anne Condon; Holger H Hoos; David H Mathews; Kevin P Murphy
Journal:  RNA       Date:  2010-10-12       Impact factor: 4.942

6.  Grass evolution inferred from chromosomal rearrangements and geometrical and statistical features in RNA structure.

Authors:  Gustavo Caetano-Anollés
Journal:  J Mol Evol       Date:  2005-05       Impact factor: 2.395

7.  The human immunodeficiency virus type 1 packaging signal and major splice donor region have a conserved stable secondary structure.

Authors:  G P Harrison; A M Lever
Journal:  J Virol       Date:  1992-07       Impact factor: 5.103

8.  A computer method for finding common base paired helices in aligned sequences: application to the analysis of random sequences.

Authors:  L Chan; M Zuker; A B Jacobson
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

9.  A comparison of optimal and suboptimal RNA secondary structures predicted by free energy minimization with structures determined by phylogenetic comparison.

Authors:  M Zuker; J A Jaeger; D H Turner
Journal:  Nucleic Acids Res       Date:  1991-05-25       Impact factor: 16.971

Review 10.  Computational methods in noncoding RNA research.

Authors:  Ariane Machado-Lima; Hernando A del Portillo; Alan Mitchell Durham
Journal:  J Math Biol       Date:  2007-09-04       Impact factor: 2.259

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