Literature DB >> 24819338

Microsatellite polymorphism and its association with body weight and selected morphometrics of farm red fox (Vulpes vulpes L.).

Magdalena Zatoń-Dobrowolska1, Anna Mucha, Heliodor Wierzbicki, David Morrice, Magdalena Moska, Maciej Dobrowolski, Piotr Przysiecki.   

Abstract

Polymorphism of 30 canine-derived microsatellites was studied in a group of 200 red foxes kept on 2 Polish farms. 22 out of 30 microsatellites were selected to study association between marker genotypes and body weight (BW), body length (BL), body circumference (BC), tail length (TL), ear height (EH), length of the right front limb (FRLL), length of the right rear limb (RRLL), length of the right front foot (FRFL) and length of the right rear foot (RRFL). A total of 112 alleles and 243 genotypes were found at 22 autosomal microsatellite loci. Three monomorphic loci deemed as uninformative were excluded from the study. The association between marker genotypes and the studied traits was analysed using general linear model (GLM) procedure and least squares means (LSM). Linkage disequilibrium (LD) was estimated to assess non-random association between microsatellite loci. Out of 19 microsatellites studied four markers showed no association with the studied traits, three markers had a significant effect on one trait, and another three markers had significant effect on two traits. Among ten microsatellites with significant effect on four economically important traits (BW, BL, BC, TL) four were associated with two characters: marker FH2613 with BW and BC, marker FH2097withBL and BC, marker ZUBECA6 with BW and BC, whereas marker REN75M10 was associated with BL and TL. The strongest LD (r(2) ranged from 0.15 to 0.33) was estimated between nine loci with significant effect on economically important traits (BW, BL, BC, TL).

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Year:  2014        PMID: 24819338      PMCID: PMC4185101          DOI: 10.1007/s13353-014-0217-x

Source DB:  PubMed          Journal:  J Appl Genet        ISSN: 1234-1983            Impact factor:   3.240


  24 in total

1.  Association of MC3R gene polymorphisms with body weight in the red fox and comparative gene organization in four canids.

Authors:  A Skorczyk; K Flisikowski; M Szydlowski; J Cieslak; R Fries; M Switonski
Journal:  Anim Genet       Date:  2011-02       Impact factor: 3.169

2.  Canid genomics: mapping genes for behavior in the silver fox.

Authors:  Tyrone C Spady; Elaine A Ostrander
Journal:  Genome Res       Date:  2007-02-06       Impact factor: 9.043

3.  Genome sequence, comparative analysis and haplotype structure of the domestic dog.

Authors:  Kerstin Lindblad-Toh; Claire M Wade; Tarjei S Mikkelsen; Elinor K Karlsson; David B Jaffe; Michael Kamal; Michele Clamp; Jean L Chang; Edward J Kulbokas; Michael C Zody; Evan Mauceli; Xiaohui Xie; Matthew Breen; Robert K Wayne; Elaine A Ostrander; Chris P Ponting; Francis Galibert; Douglas R Smith; Pieter J DeJong; Ewen Kirkness; Pablo Alvarez; Tara Biagi; William Brockman; Jonathan Butler; Chee-Wye Chin; April Cook; James Cuff; Mark J Daly; David DeCaprio; Sante Gnerre; Manfred Grabherr; Manolis Kellis; Michael Kleber; Carolyne Bardeleben; Leo Goodstadt; Andreas Heger; Christophe Hitte; Lisa Kim; Klaus-Peter Koepfli; Heidi G Parker; John P Pollinger; Stephen M J Searle; Nathan B Sutter; Rachael Thomas; Caleb Webber; Jennifer Baldwin; Adal Abebe; Amr Abouelleil; Lynne Aftuck; Mostafa Ait-Zahra; Tyler Aldredge; Nicole Allen; Peter An; Scott Anderson; Claudel Antoine; Harindra Arachchi; Ali Aslam; Laura Ayotte; Pasang Bachantsang; Andrew Barry; Tashi Bayul; Mostafa Benamara; Aaron Berlin; Daniel Bessette; Berta Blitshteyn; Toby Bloom; Jason Blye; Leonid Boguslavskiy; Claude Bonnet; Boris Boukhgalter; Adam Brown; Patrick Cahill; Nadia Calixte; Jody Camarata; Yama Cheshatsang; Jeffrey Chu; Mieke Citroen; Alville Collymore; Patrick Cooke; Tenzin Dawoe; Riza Daza; Karin Decktor; Stuart DeGray; Norbu Dhargay; Kimberly Dooley; Kathleen Dooley; Passang Dorje; Kunsang Dorjee; Lester Dorris; Noah Duffey; Alan Dupes; Osebhajajeme Egbiremolen; Richard Elong; Jill Falk; Abderrahim Farina; Susan Faro; Diallo Ferguson; Patricia Ferreira; Sheila Fisher; Mike FitzGerald; Karen Foley; Chelsea Foley; Alicia Franke; Dennis Friedrich; Diane Gage; Manuel Garber; Gary Gearin; Georgia Giannoukos; Tina Goode; Audra Goyette; Joseph Graham; Edward Grandbois; Kunsang Gyaltsen; Nabil Hafez; Daniel Hagopian; Birhane Hagos; Jennifer Hall; Claire Healy; Ryan Hegarty; Tracey Honan; Andrea Horn; Nathan Houde; Leanne Hughes; Leigh Hunnicutt; M Husby; Benjamin Jester; Charlien Jones; Asha Kamat; Ben Kanga; Cristyn Kells; Dmitry Khazanovich; Alix Chinh Kieu; Peter Kisner; Mayank Kumar; Krista Lance; Thomas Landers; Marcia Lara; William Lee; Jean-Pierre Leger; Niall Lennon; Lisa Leuper; Sarah LeVine; Jinlei Liu; Xiaohong Liu; Yeshi Lokyitsang; Tashi Lokyitsang; Annie Lui; Jan Macdonald; John Major; Richard Marabella; Kebede Maru; Charles Matthews; Susan McDonough; Teena Mehta; James Meldrim; Alexandre Melnikov; Louis Meneus; Atanas Mihalev; Tanya Mihova; Karen Miller; Rachel Mittelman; Valentine Mlenga; Leonidas Mulrain; Glen Munson; Adam Navidi; Jerome Naylor; Tuyen Nguyen; Nga Nguyen; Cindy Nguyen; Thu Nguyen; Robert Nicol; Nyima Norbu; Choe Norbu; Nathaniel Novod; Tenchoe Nyima; Peter Olandt; Barry O'Neill; Keith O'Neill; Sahal Osman; Lucien Oyono; Christopher Patti; Danielle Perrin; Pema Phunkhang; Fritz Pierre; Margaret Priest; Anthony Rachupka; Sujaa Raghuraman; Rayale Rameau; Verneda Ray; Christina Raymond; Filip Rege; Cecil Rise; Julie Rogers; Peter Rogov; Julie Sahalie; Sampath Settipalli; Theodore Sharpe; Terrance Shea; Mechele Sheehan; Ngawang Sherpa; Jianying Shi; Diana Shih; Jessie Sloan; Cherylyn Smith; Todd Sparrow; John Stalker; Nicole Stange-Thomann; Sharon Stavropoulos; Catherine Stone; Sabrina Stone; Sean Sykes; Pierre Tchuinga; Pema Tenzing; Senait Tesfaye; Dawa Thoulutsang; Yama Thoulutsang; Kerri Topham; Ira Topping; Tsamla Tsamla; Helen Vassiliev; Vijay Venkataraman; Andy Vo; Tsering Wangchuk; Tsering Wangdi; Michael Weiand; Jane Wilkinson; Adam Wilson; Shailendra Yadav; Shuli Yang; Xiaoping Yang; Geneva Young; Qing Yu; Joanne Zainoun; Lisa Zembek; Andrew Zimmer; Eric S Lander
Journal:  Nature       Date:  2005-12-08       Impact factor: 49.962

Review 4.  The canine genome.

Authors:  Elaine A Ostrander; Robert K Wayne
Journal:  Genome Res       Date:  2005-12       Impact factor: 9.043

5.  Mapping Loci for fox domestication: deconstruction/reconstruction of a behavioral phenotype.

Authors:  Anna V Kukekova; Lyudmila N Trut; Kevin Chase; Anastasiya V Kharlamova; Jennifer L Johnson; Svetlana V Temnykh; Irina N Oskina; Rimma G Gulevich; Anastasiya V Vladimirova; Simon Klebanov; Darya V Shepeleva; Svetlana G Shikhevich; Gregory M Acland; Karl G Lark
Journal:  Behav Genet       Date:  2010-12-14       Impact factor: 2.805

6.  Two candidate genes (FTO and INSIG2) for fat accumulation in four canids: chromosome mapping, gene polymorphisms and association studies of body and skin weight of red foxes.

Authors:  M Grzes; I Szczerbal; H Fijak-Nowak; M Szydlowski; M Switonski
Journal:  Cytogenet Genome Res       Date:  2011-08-12       Impact factor: 1.636

Review 7.  Comparative genomics of 3 farm canids in relation to the dog.

Authors:  M Switonski; I Szczerbal; J Nowacka-Woszuk
Journal:  Cytogenet Genome Res       Date:  2009-12-09       Impact factor: 1.636

8.  A simple genetic architecture underlies morphological variation in dogs.

Authors:  Adam R Boyko; Pascale Quignon; Lin Li; Jeffrey J Schoenebeck; Jeremiah D Degenhardt; Kirk E Lohmueller; Keyan Zhao; Abra Brisbin; Heidi G Parker; Bridgett M vonHoldt; Michele Cargill; Adam Auton; Andy Reynolds; Abdel G Elkahloun; Marta Castelhano; Dana S Mosher; Nathan B Sutter; Gary S Johnson; John Novembre; Melissa J Hubisz; Adam Siepel; Robert K Wayne; Carlos D Bustamante; Elaine A Ostrander
Journal:  PLoS Biol       Date:  2010-08-10       Impact factor: 8.029

9.  A meiotic linkage map of the silver fox, aligned and compared to the canine genome.

Authors:  Anna V Kukekova; Lyudmila N Trut; Irina N Oskina; Jennifer L Johnson; Svetlana V Temnykh; Anastasiya V Kharlamova; Darya V Shepeleva; Rimma G Gulievich; Svetlana G Shikhevich; Alexander S Graphodatsky; Gustavo D Aguirre; Gregory M Acland
Journal:  Genome Res       Date:  2007-02-06       Impact factor: 9.043

10.  Sequence comparison of prefrontal cortical brain transcriptome from a tame and an aggressive silver fox (Vulpes vulpes).

Authors:  Anna V Kukekova; Jennifer L Johnson; Clotilde Teiling; Lewyn Li; Irina N Oskina; Anastasiya V Kharlamova; Rimma G Gulevich; Ravee Padte; Michael M Dubreuil; Anastasiya V Vladimirova; Darya V Shepeleva; Svetlana G Shikhevich; Qi Sun; Lalit Ponnala; Svetlana V Temnykh; Lyudmila N Trut; Gregory M Acland
Journal:  BMC Genomics       Date:  2011-10-03       Impact factor: 3.969

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  1 in total

1.  Insight into the Genetic Population Structure of Wild Red Foxes in Poland Reveals Low Risk of Genetic Introgression from Escaped Farm Red Foxes.

Authors:  Heliodor Wierzbicki; Magdalena Zatoń-Dobrowolska; Anna Mucha; Magdalena Moska
Journal:  Genes (Basel)       Date:  2021-04-25       Impact factor: 4.096

  1 in total

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