Literature DB >> 24816661

SNP genotyping: the KASP assay.

Chunlin He1, John Holme, Jeffrey Anthony.   

Abstract

The KASP genotyping assay utilizes a unique form of competitive allele-specific PCR combined with a novel, homogeneous, fluorescence-based reporting system for the identification and measurement of genetic variation occurring at the nucleotide level to detect single nucleotide polymorphisms (SNPs) or inserts and deletions (InDels). The KASP technology is suitable for use on a variety of equipment platforms and provides flexibility in terms of the number of SNPs and the number of samples able to be analyzed. The KASP chemistry functions equally well in 96-, 384-, and 1,536-well microtiter plate formats and has been utilized over many years in large and small laboratories by users across the fields of human, animal, and plant genetics.

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Year:  2014        PMID: 24816661     DOI: 10.1007/978-1-4939-0446-4_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  74 in total

1.  How reliable is internet-based self-reported identity, socio-demographic and obesity measures in European adults?

Authors:  Carlos Celis-Morales; Katherine M Livingstone; Clara Woolhead; Hannah Forster; Clare B O'Donovan; Anna L Macready; Rosalind Fallaize; Cyril F M Marsaux; Lydia Tsirigoti; Eirini Efstathopoulou; George Moschonis; Santiago Navas-Carretero; Rodrigo San-Cristobal; Silvia Kolossa; Ulla L Klein; Jacqueline Hallmann; Magdalena Godlewska; Agnieszka Surwiłło; Christian A Drevon; Jildau Bouwman; Keith Grimaldi; Laurence D Parnell; Yannis Manios; Iwona Traczyk; Eileen R Gibney; Lorraine Brennan; Marianne C Walsh; Julie A Lovegrove; J Alfredo Martinez; Hannelore Daniel; Wim H M Saris; Mike Gibney; John C Mathers
Journal:  Genes Nutr       Date:  2015-07-05       Impact factor: 5.523

2.  Identification of a missense variant in the WFS1 gene that causes a mild form of Wolfram syndrome and is associated with risk for type 2 diabetes in Ashkenazi Jewish individuals.

Authors:  Vikas Bansal; Bernhard O Boehm; Ariel Darvasi
Journal:  Diabetologia       Date:  2018-07-16       Impact factor: 10.122

3.  Association mapping and genetic dissection of nitrogen use efficiency-related traits in rice (Oryza sativa L.).

Authors:  Zhiyi Liu; Chengsong Zhu; Yue Jiang; Yunlu Tian; Jun Yu; Hongzhou An; Weijie Tang; Juan Sun; Jianpeng Tang; Gaoming Chen; Huqu Zhai; Chunming Wang; Jianmin Wan
Journal:  Funct Integr Genomics       Date:  2016-02-27       Impact factor: 3.410

4.  Combined linkage and association mapping identifies a major QTL (qRtsc8-1), conferring tar spot complex resistance in maize.

Authors:  George Mahuku; Jiafa Chen; Rosemary Shrestha; Luis A Narro; Karen Viviana Osorio Guerrero; Alba Lucia Arcos; Yunbi Xu
Journal:  Theor Appl Genet       Date:  2016-03-12       Impact factor: 5.699

5.  Genome-wide association study identifies novel susceptibility loci for KIT D816V positive mastocytosis.

Authors:  Gabriella Galatà; Andrés C García-Montero; Thomas Kristensen; Ahmed A Z Dawoud; Javier I Muñoz-González; Manja Meggendorfer; Paola Guglielmelli; Yvette Hoade; Ivan Alvarez-Twose; Christian Gieger; Konstantin Strauch; Luigi Ferrucci; Toshiko Tanaka; Stefania Bandinelli; Theresia M Schnurr; Torsten Haferlach; Sigurd Broesby-Olsen; Hanne Vestergaard; Michael Boe Møller; Carsten Bindslev-Jensen; Alessandro M Vannucchi; Alberto Orfao; Deepti Radia; Andreas Reiter; Andrew J Chase; Nicholas C P Cross; William J Tapper
Journal:  Am J Hum Genet       Date:  2021-01-08       Impact factor: 11.025

6.  The role of pre-, peri-, and postnatal risk factors in bipolar disorder and adult ADHD.

Authors:  Franziska Tole; Juliane Kopf; Katrin Schröter; Viola Stella Palladino; Christian P Jacob; Andreas Reif; Sarah Kittel-Schneider
Journal:  J Neural Transm (Vienna)       Date:  2019-02-13       Impact factor: 3.575

7.  Shifting Zebrafish Lethal Skeletal Mutant Penetrance by Progeny Testing.

Authors:  Elliott P Brooks; James T Nichols
Journal:  J Vis Exp       Date:  2017-09-01       Impact factor: 1.355

8.  CRTC2 polymorphism as a risk factor for the incidence of metabolic syndrome in patients with solid organ transplantation.

Authors:  L Quteineh; P-Y Bochud; D Golshayan; S Crettol; J-P Venetz; O Manuel; Z Kutalik; A Treyer; R Lehmann; N J Mueller; I Binet; C van Delden; J Steiger; P Mohacsi; J-F Dufour; P M Soccal; M Pascual; C B Eap
Journal:  Pharmacogenomics J       Date:  2015-12-08       Impact factor: 3.550

9.  Multiple Avirulence Loci and Allele-Specific Effector Recognition Control the Pm3 Race-Specific Resistance of Wheat to Powdery Mildew.

Authors:  Salim Bourras; Kaitlin Elyse McNally; Roi Ben-David; Francis Parlange; Stefan Roffler; Coraline Rosalie Praz; Simone Oberhaensli; Fabrizio Menardo; Daniel Stirnweis; Zeev Frenkel; Luisa Katharina Schaefer; Simon Flückiger; Georges Treier; Gerhard Herren; Abraham B Korol; Thomas Wicker; Beat Keller
Journal:  Plant Cell       Date:  2015-10-09       Impact factor: 11.277

10.  Clinical-pharmacogenetic predictive models for MTX discontinuation due to adverse events in rheumatoid arthritis.

Authors:  B Jenko; L Lusa; M Tomsic; S Praprotnik; V Dolzan
Journal:  Pharmacogenomics J       Date:  2016-05-24       Impact factor: 3.550

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