Literature DB >> 24814066

The hybrid nature of the Eukaryota and a consilient view of life on Earth.

James O McInerney1, Mary J O'Connell2, Davide Pisani3.   

Abstract

The origin of the eukaryotic cell, which is known as eukaryogenesis, has puzzled scientists for more than 100 years, and many hypotheses have been proposed. Recent analyses of new data enable the safe elimination of some of these hypotheses, whereas support for other hypotheses has increased. In this Opinion article, we evaluate the available theories for their compatibility with empirical observations and conclude that cellular life consists of two primary, paraphyletic prokaryotic groups and one secondary, monophyletic group that has symbiogenic origins - the eukaryotes.

Mesh:

Year:  2014        PMID: 24814066     DOI: 10.1038/nrmicro3271

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  77 in total

1.  Eukaryotic genes of archaebacterial origin are more important than the more numerous eubacterial genes, irrespective of function.

Authors:  James A Cotton; James O McInerney
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-17       Impact factor: 11.205

2.  Modeling compositional heterogeneity.

Authors:  Peter G Foster
Journal:  Syst Biol       Date:  2004-06       Impact factor: 15.683

Review 3.  Evaluating hypotheses for the origin of eukaryotes.

Authors:  Anthony M Poole; David Penny
Journal:  Bioessays       Date:  2007-01       Impact factor: 4.345

4.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

5.  Reassessing the first appearance of eukaryotes and cyanobacteria.

Authors:  Birger Rasmussen; Ian R Fletcher; Jochen J Brocks; Matt R Kilburn
Journal:  Nature       Date:  2008-10-23       Impact factor: 49.962

6.  The hydrogen hypothesis for the first eukaryote.

Authors:  W Martin; M Müller
Journal:  Nature       Date:  1998-03-05       Impact factor: 49.962

7.  The archaebacteria and eukaryotic origins.

Authors:  L M Van Valen; V C Maiorana
Journal:  Nature       Date:  1980-09-18       Impact factor: 49.962

8.  Planctomycetes and eukaryotes: a case of analogy not homology.

Authors:  James O McInerney; William F Martin; Eugene V Koonin; John F Allen; Michael Y Galperin; Nick Lane; John M Archibald; T Martin Embley
Journal:  Bioessays       Date:  2011-08-22       Impact factor: 4.345

9.  Stability of heterochiral hybrid membrane made of bacterial sn-G3P lipids and archaeal sn-G1P lipids.

Authors:  Haruo Shimada; Akihiko Yamagishi
Journal:  Biochemistry       Date:  2011-04-20       Impact factor: 3.162

10.  An evolutionary network of genes present in the eukaryote common ancestor polls genomes on eukaryotic and mitochondrial origin.

Authors:  Thorsten Thiergart; Giddy Landan; Marc Schenk; Tal Dagan; William F Martin
Journal:  Genome Biol Evol       Date:  2012-02-21       Impact factor: 3.416

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  54 in total

Review 1.  Early Microbial Evolution: The Age of Anaerobes.

Authors:  William F Martin; Filipa L Sousa
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-12-18       Impact factor: 10.005

2.  Evolution: Steps on the road to eukaryotes.

Authors:  T Martin Embley; Tom A Williams
Journal:  Nature       Date:  2015-05-06       Impact factor: 49.962

3.  Mosaic nature of the mitochondrial proteome: Implications for the origin and evolution of mitochondria.

Authors:  Michael W Gray
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

4.  Asgard archaea illuminate the origin of eukaryotic cellular complexity.

Authors:  Katarzyna Zaremba-Niedzwiedzka; Eva F Caceres; Jimmy H Saw; Disa Bäckström; Lina Juzokaite; Emmelien Vancaester; Kiley W Seitz; Karthik Anantharaman; Piotr Starnawski; Kasper U Kjeldsen; Matthew B Stott; Takuro Nunoura; Jillian F Banfield; Andreas Schramm; Brett J Baker; Anja Spang; Thijs J G Ettema
Journal:  Nature       Date:  2017-01-11       Impact factor: 49.962

Review 5.  The origin of phagocytosis in Earth history.

Authors:  Daniel B Mills
Journal:  Interface Focus       Date:  2020-06-12       Impact factor: 3.906

6.  Early photosynthetic eukaryotes inhabited low-salinity habitats.

Authors:  Patricia Sánchez-Baracaldo; John A Raven; Davide Pisani; Andrew H Knoll
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-14       Impact factor: 11.205

7.  Microbiology: Mind the gaps in cellular evolution.

Authors:  James O McInerney; Mary J O'Connell
Journal:  Nature       Date:  2017-01-11       Impact factor: 49.962

Review 8.  The Physiology of Phagocytosis in the Context of Mitochondrial Origin.

Authors:  William F Martin; Aloysius G M Tielens; Marek Mentel; Sriram G Garg; Sven B Gould
Journal:  Microbiol Mol Biol Rev       Date:  2017-06-14       Impact factor: 11.056

9.  Evolution: A four billion year old metabolism.

Authors:  James O McInerney
Journal:  Nat Microbiol       Date:  2016-07-25       Impact factor: 17.745

10.  The multiple evolutionary origins of the eukaryotic N-glycosylation pathway.

Authors:  Jonathan Lombard
Journal:  Biol Direct       Date:  2016-08-04       Impact factor: 4.540

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