Literature DB >> 24813708

The dynamic nature of DNA methylation: a role in response to social and seasonal variation.

Sebastian Alvarado1, Russell D Fernald2, Kenneth B Storey2, Moshe Szyf3.   

Abstract

An organism's ability to adapt to its environment depends on its ability to regulate and maintain tissue specific, temporal patterns of gene transcription in response to specific environmental cues. Epigenetic mechanisms are responsible for many of the intricacies of a gene's regulation that alter expression patterns without affecting the genetic sequence. In particular, DNA methylation has been shown to have an important role in regulating early development and in some human diseases. Within these domains, DNA methylation has been extensively characterized over the past 60 years, but the discovery of its role in regulating behavioral outcomes has led to renewed interest in its potential roles in animal behavior and phenotypic plasticity. The conservation of DNA methylation across the animal kingdom suggests a possible role in the plasticity of genomic responses to environmental cues in natural environments. Here, we review the historical context for the study of DNA methylation, its function and mechanisms, and provide examples of gene/environment interactions in response to social and seasonal cues. Finally, we discuss useful tools to interrogate and dissect the function of DNA methylation in non-model organisms.
© The Author 2014. Published by Oxford University Press on behalf of the Society for Integrative and Comparative Biology. All rights reserved. For permissions please email: journals.permissions@oup.com.

Entities:  

Mesh:

Year:  2014        PMID: 24813708      PMCID: PMC4133575          DOI: 10.1093/icb/icu034

Source DB:  PubMed          Journal:  Integr Comp Biol        ISSN: 1540-7063            Impact factor:   3.326


  112 in total

Review 1.  Long non-coding RNAs: insights into functions.

Authors:  Tim R Mercer; Marcel E Dinger; John S Mattick
Journal:  Nat Rev Genet       Date:  2009-03       Impact factor: 53.242

2.  Variable patterns of total DNA and rDNA methylation in animals.

Authors:  A P Bird; M H Taggart
Journal:  Nucleic Acids Res       Date:  1980-04-11       Impact factor: 16.971

Review 3.  DNA methylation and gene function.

Authors:  A Razin; A D Riggs
Journal:  Science       Date:  1980-11-07       Impact factor: 47.728

4.  The absence of detectable methylated bases in Drosophila melanogaster DNA.

Authors:  S Urieli-Shoval; Y Gruenbaum; J Sedat; A Razin
Journal:  FEBS Lett       Date:  1982-09-06       Impact factor: 4.124

5.  Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells.

Authors:  M Ehrlich; M A Gama-Sosa; L H Huang; R M Midgett; K C Kuo; R A McCune; C Gehrke
Journal:  Nucleic Acids Res       Date:  1982-04-24       Impact factor: 16.971

6.  Absence of cytosine methylation at C-C-G-G and G-C-G-C sites in the rDNA coding regions and intervening sequences of Drosophila and the rDNA of other insects.

Authors:  P M Rae; R E Steele
Journal:  Nucleic Acids Res       Date:  1979-07-11       Impact factor: 16.971

7.  Hypomethylation of ras oncogenes in primary human cancers.

Authors:  A P Feinberg; B Vogelstein
Journal:  Biochem Biophys Res Commun       Date:  1983-02-28       Impact factor: 3.575

8.  Hypomethylation distinguishes genes of some human cancers from their normal counterparts.

Authors:  A P Feinberg; B Vogelstein
Journal:  Nature       Date:  1983-01-06       Impact factor: 49.962

9.  Lasting epigenetic influence of early-life adversity on the BDNF gene.

Authors:  Tania L Roth; Farah D Lubin; Adam J Funk; J David Sweatt
Journal:  Biol Psychiatry       Date:  2009-01-15       Impact factor: 13.382

10.  The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores.

Authors:  Rafael A Irizarry; Christine Ladd-Acosta; Andrew P Feinberg; Bo Wen; Zhijin Wu; Carolina Montano; Patrick Onyango; Hengmi Cui; Kevin Gabo; Michael Rongione; Maree Webster; Hong Ji; James Potash; Sarven Sabunciyan
Journal:  Nat Genet       Date:  2009-01-18       Impact factor: 38.330

View more
  16 in total

1.  Methylation of insulin DNA in response to proinflammatory cytokines during the progression of autoimmune diabetes in NOD mice.

Authors:  Jinxiu Rui; Songyan Deng; Jasmin Lebastchi; Pamela L Clark; Sahar Usmani-Brown; Kevan C Herold
Journal:  Diabetologia       Date:  2016-02-24       Impact factor: 10.122

Review 2.  Epigenetics in comparative biology: why we should pay attention.

Authors:  Warren W Burggren; David Crews
Journal:  Integr Comp Biol       Date:  2014-04-09       Impact factor: 3.326

3.  A Novel Single-Nucleotide Deletion (c.1020delA) in NSUN2 Causes Intellectual Disability in an Emirati Child.

Authors:  Makanko Komara; Aisha M Al-Shamsi; Salma Ben-Salem; Bassam R Ali; Lihadh Al-Gazali
Journal:  J Mol Neurosci       Date:  2015-06-09       Impact factor: 3.444

4.  DNA methylation studies of depression with onset in the peripartum: A critical systematic review.

Authors:  Sarah Ellen Braun; Dana Lapato; Roy E Brown; Eva Lancaster; Timothy P York; Ananda B Amstadter; Patricia A Kinser
Journal:  Neurosci Biobehav Rev       Date:  2019-04-11       Impact factor: 8.989

5.  Effects of different energy diets on DNA methylation and mRNA expression in follicle stimulating hormone receptor gene promoter region of Duolang sheep during estrus.

Authors:  Bo Liu; Hongjian Li; Weikun Tao; Fei Huang; Xue Rui; Jie Wang; Peng Niu; Di Fang; Qinghua Gao
Journal:  Mol Biol Rep       Date:  2022-01-17       Impact factor: 2.316

6.  Global DNA methylation loss associated with mercury contamination and aging in the American alligator (Alligator mississippiensis).

Authors:  Frances M Nilsen; Benjamin B Parrott; John A Bowden; Brittany L Kassim; Stephen E Somerville; Teresa A Bryan; Colleen E Bryan; Ted R Lange; J Patrick Delaney; Arnold M Brunell; Stephen E Long; Louis J Guillette
Journal:  Sci Total Environ       Date:  2015-12-31       Impact factor: 7.963

7.  Robust DNA Methylation in the Clonal Raider Ant Brain.

Authors:  Romain Libbrecht; Peter Robert Oxley; Laurent Keller; Daniel Jan Christoph Kronauer
Journal:  Curr Biol       Date:  2016-01-21       Impact factor: 10.834

8.  Epigenetic regulation by DNA methyltransferases during torpor in the thirteen-lined ground squirrel Ictidomys tridecemlineatus.

Authors:  Shannon N Tessier; W Aline Ingelson-Filpula; Kenneth B Storey
Journal:  Mol Cell Biochem       Date:  2021-06-30       Impact factor: 3.396

9.  Social exclusion changes histone modifications H3K4me3 and H3K27ac in liver tissue of wild house mice.

Authors:  Linda Krause; Bernhard Haubold; Angelika G Börsch-Haubold
Journal:  PLoS One       Date:  2015-08-12       Impact factor: 3.240

10.  Seasonality modifies methylation profiles in healthy people.

Authors:  Fulvio Ricceri; Morena Trevisan; Valentina Fiano; Chiara Grasso; Francesca Fasanelli; Chiara Scoccianti; Laura De Marco; Anna Gillio Tos; Paolo Vineis; Carlotta Sacerdote
Journal:  PLoS One       Date:  2014-09-11       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.