Literature DB >> 24811647

Effect of quantum nuclear motion on hydrogen bonding.

Ross H McKenzie1, Christiaan Bekker1, Bijyalaxmi Athokpam2, Sai G Ramesh2.   

Abstract

This work considers how the properties of hydrogen bonded complexes, X-H⋯Y, are modified by the quantum motion of the shared proton. Using a simple two-diabatic state model Hamiltonian, the analysis of the symmetric case, where the donor (X) and acceptor (Y) have the same proton affinity, is carried out. For quantitative comparisons, a parametrization specific to the O-H⋯O complexes is used. The vibrational energy levels of the one-dimensional ground state adiabatic potential of the model are used to make quantitative comparisons with a vast body of condensed phase data, spanning a donor-acceptor separation (R) range of about 2.4-3.0 Å, i.e., from strong to weak hydrogen bonds. The position of the proton (which determines the X-H bond length) and its longitudinal vibrational frequency, along with the isotope effects in both are described quantitatively. An analysis of the secondary geometric isotope effect, using a simple extension of the two-state model, yields an improved agreement of the predicted variation with R of frequency isotope effects. The role of bending modes is also considered: their quantum effects compete with those of the stretching mode for weak to moderate H-bond strengths. In spite of the economy in the parametrization of the model used, it offers key insights into the defining features of H-bonds, and semi-quantitatively captures several trends.

Entities:  

Year:  2014        PMID: 24811647     DOI: 10.1063/1.4873352

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  9 in total

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2.  Quantum delocalization of protons in the hydrogen-bond network of an enzyme active site.

Authors:  Lu Wang; Stephen D Fried; Steven G Boxer; Thomas E Markland
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-12       Impact factor: 11.205

3.  A theoretical exploration of the intermolecular interactions between resveratrol and water: a DFT and AIM analysis.

Authors:  A Suvitha; N S Venkataramanan; R Sahara; Y Kawazoe
Journal:  J Mol Model       Date:  2019-02-08       Impact factor: 1.810

4.  Direct observation of ultrafast hydrogen bond strengthening in liquid water.

Authors:  Jie Yang; Riccardo Dettori; J Pedro F Nunes; Nanna H List; Elisa Biasin; Martin Centurion; Zhijiang Chen; Amy A Cordones; Daniel P Deponte; Tony F Heinz; Michael E Kozina; Kathryn Ledbetter; Ming-Fu Lin; Aaron M Lindenberg; Mianzhen Mo; Anders Nilsson; Xiaozhe Shen; Thomas J A Wolf; Davide Donadio; Kelly J Gaffney; Todd J Martinez; Xijie Wang
Journal:  Nature       Date:  2021-08-25       Impact factor: 49.962

5.  Structures, Energetics, and Spectra of (NH) and (OH) Tautomers of 2-(2-Hydroxyphenyl)-1-azaazulene: A Density Functional Theory/Time-Dependent Density Functional Theory Study.

Authors:  Asmaa B El-Meligy; Safinaz H El-Demerdash; Mohamed A Abdel-Rahman; Mohamed A M Mahmoud; Tetsuya Taketsugu; Ahmed M El-Nahas
Journal:  ACS Omega       Date:  2022-04-15

6.  Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP).

Authors:  Luke M Oltrogge; Steven G Boxer
Journal:  ACS Cent Sci       Date:  2015-06-05       Impact factor: 14.553

7.  How Water's Properties Are Encoded in Its Molecular Structure and Energies.

Authors:  Emiliano Brini; Christopher J Fennell; Marivi Fernandez-Serra; Barbara Hribar-Lee; Miha Lukšič; Ken A Dill
Journal:  Chem Rev       Date:  2017-09-26       Impact factor: 60.622

8.  Inverse Temperature Dependence of Nuclear Quantum Effects in DNA Base Pairs.

Authors:  Wei Fang; Ji Chen; Mariana Rossi; Yexin Feng; Xin-Zheng Li; Angelos Michaelides
Journal:  J Phys Chem Lett       Date:  2016-05-24       Impact factor: 6.475

9.  Unraveling the structural and chemical features of biological short hydrogen bonds.

Authors:  Shengmin Zhou; Lu Wang
Journal:  Chem Sci       Date:  2019-07-01       Impact factor: 9.825

  9 in total

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