Literature DB >> 24810071

The complete chloroplast genome sequence of American bird pepper (Capsicum annuum var. glabriusculum).

Fan-chun Zeng1, Cheng-wen Gao2, Li-zhi Gao1,3.   

Abstract

The complete chloroplast genome sequence of American bird pepper (Capsicum annuum var. glabriusculum) is reported and characterized in this study. The genome size is 156,612 bp, containing a pair of inverted repeats (IRs) of 25,776 bp separated by a large single-copy region of 87,213 bp and a small single-copy region of 17,851 bp. The chloroplast genome harbors 130 known genes, including 89 protein-coding genes, 8 ribosomal RNA genes, and 37 tRNA genes. A total of 18 of these genes are duplicated in the inverted repeat regions, 16 genes contain 1 intron, and 2 genes and one ycf have 2 introns.

Entities:  

Keywords:  Capsicum annuum var. glabriusculum; chloroplast genome; plastid

Mesh:

Year:  2014        PMID: 24810071     DOI: 10.3109/19401736.2014.913160

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  5 in total

1.  Pan-plastome approach empowers the assessment of genetic variation in cultivated Capsicum species.

Authors:  Mahmoud Magdy; Lijun Ou; Huiyang Yu; Rong Chen; Yuhong Zhou; Heba Hassan; Bihong Feng; Nathan Taitano; Esther van der Knaap; Xuexiao Zou; Feng Li; Bo Ouyang
Journal:  Hortic Res       Date:  2019-09-07       Impact factor: 6.793

2.  The complete chloroplast genome sequence of Capsicum chinense Jacq. (Solanaceae).

Authors:  Hyun-Seung Park; Jundae Lee; Sang-Choon Lee; Tae-Jin Yang; Jae Bok Yoon
Journal:  Mitochondrial DNA B Resour       Date:  2016-03-28       Impact factor: 0.658

3.  The complete chloroplast genome of Capsicum frutescens (Solanaceae).

Authors:  Donghwan Shim; Sebastin Raveendar; Jung-Ro Lee; Gi-An Lee; Na-Young Ro; Young-Ah Jeon; Gyu-Taek Cho; Ho-Sun Lee; Kyung-Ho Ma; Jong-Wook Chung
Journal:  Appl Plant Sci       Date:  2016-05-17       Impact factor: 1.936

4.  A comprehensive characterization of simple sequence repeats in pepper genomes provides valuable resources for marker development in Capsicum.

Authors:  Jiaowen Cheng; Zicheng Zhao; Bo Li; Cheng Qin; Zhiming Wu; Diana L Trejo-Saavedra; Xirong Luo; Junjie Cui; Rafael F Rivera-Bustamante; Shuaicheng Li; Kailin Hu
Journal:  Sci Rep       Date:  2016-01-07       Impact factor: 4.379

5.  The Complete Plastome Sequences of Eleven Capsicum Genotypes: Insights into DNA Variation and Molecular Evolution.

Authors:  Nunzio D'Agostino; Rachele Tamburino; Concita Cantarella; Valentina De Carluccio; Lorenza Sannino; Salvatore Cozzolino; Teodoro Cardi; Nunzia Scotti
Journal:  Genes (Basel)       Date:  2018-10-17       Impact factor: 4.096

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.