Literature DB >> 24808225

Web-based workflow planning platform supporting the design and execution of complex multiscale cancer models.

Vangelis Sakkalis, Stelios Sfakianakis, Eleftheria Tzamali, Kostas Marias, Georgios Stamatakos, Fay Misichroni, Eleftherios Ouzounoglou, Eleni Kolokotroni, Dimitra Dionysiou, David Johnson, Steve McKeever, Norbert Graf.   

Abstract

Significant Virtual Physiological Human efforts and projects have been concerned with cancer modeling, especially in the European Commission Seventh Framework research program, with the ambitious goal to approach personalized cancer simulation based on patient-specific data and thereby optimize therapy decisions in the clinical setting. However, building realistic in silico predictive models targeting the clinical practice requires interactive, synergetic approaches to integrate the currently fragmented efforts emanating from the systems biology and computational oncology communities all around the globe. To further this goal, we propose an intelligent graphical workflow planning system that exploits the multiscale and modular nature of cancer and allows building complex cancer models by intuitively linking/interchanging highly specialized models. The system adopts and extends current standardization efforts, key tools, and infrastructure in view of building a pool of reliable and reproducible models capable of improving current therapies and demonstrating the potential for clinical translation of these technologies.

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Year:  2014        PMID: 24808225     DOI: 10.1109/JBHI.2013.2297167

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  6 in total

Review 1.  The role of markup for enabling interoperability in health informatics.

Authors:  Steve McKeever; David Johnson
Journal:  Front Physiol       Date:  2015-05-18       Impact factor: 4.566

2.  In Vitro/In Silico Study on the Role of Doubling Time Heterogeneity among Primary Glioblastoma Cell Lines.

Authors:  M-E Oraiopoulou; E Tzamali; G Tzedakis; A Vakis; J Papamatheakis; V Sakkalis
Journal:  Biomed Res Int       Date:  2017-10-31       Impact factor: 3.411

Review 3.  Navigating Multi-Scale Cancer Systems Biology Towards Model-Driven Clinical Oncology and Its Applications in Personalized Therapeutics.

Authors:  Mahnoor Naseer Gondal; Safee Ullah Chaudhary
Journal:  Front Oncol       Date:  2021-11-24       Impact factor: 6.244

Review 4.  Integrating Multiscale Modeling with Drug Effects for Cancer Treatment.

Authors:  Xiangfang L Li; Wasiu O Oduola; Lijun Qian; Edward R Dougherty
Journal:  Cancer Inform       Date:  2016-01-13

5.  Model-Based Tumor Growth Dynamics and Therapy Response in a Mouse Model of De Novo Carcinogenesis.

Authors:  Charalambos Loizides; Demetris Iacovides; Marios M Hadjiandreou; Gizem Rizki; Achilleas Achilleos; Katerina Strati; Georgios D Mitsis
Journal:  PLoS One       Date:  2015-12-09       Impact factor: 3.240

6.  In silico modeling for tumor growth visualization.

Authors:  Fleur Jeanquartier; Claire Jean-Quartier; David Cemernek; Andreas Holzinger
Journal:  BMC Syst Biol       Date:  2016-08-08
  6 in total

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