Literature DB >> 24806938

High-resolution two-dimensional J-resolved NMR spectroscopy for biological systems.

Yuqing Huang1, Shuhui Cai1, Zhiyong Zhang1, Zhong Chen2.   

Abstract

NMR spectroscopy is a principal tool in metabolomic studies and can, in theory, yield atom-level information critical for understanding biological systems. Nevertheless, NMR investigations on biological tissues generally have to contend with field inhomogeneities originating from variations in macroscopic magnetic susceptibility; these field inhomogeneities broaden spectral lines and thereby obscure metabolite signals. The congestion in one-dimensional NMR spectra of biological tissues often leads to ambiguities in metabolite identification and quantification. We propose an NMR approach based on intermolecular double-quantum coherences to recover high-resolution two-dimensional (2D) J-resolved spectra from inhomogeneous magnetic fields, such as those created by susceptibility variations in intact biological tissues. The proposed method makes it possible to acquire high-resolution 2D J-resolved spectra on intact biological samples without recourse to time-consuming shimming procedures or the use of specialized hardware, such as magic-angle-spinning probes. Separation of chemical shifts and J couplings along two distinct dimensions is achieved, which reduces spectral crowding and increases metabolite specificity. Moreover, the apparent J coupling constants observed are magnified by a factor of 3, facilitating the accurate measurement of small J couplings, which is useful in metabolic analyses. Dramatically improved spectral resolution is demonstrated in our applications of the technique on pig brain tissues. The resulting spectra contain a wealth of chemical shift and J-coupling information that is invaluable for metabolite analyses. A spatially localized experiment applied on an intact fish (Crossocheilus siamensis) reveals the promise of the proposed method in in vivo metabolite studies. Moreover, the proposed method makes few demands on spectrometer hardware and therefore constitutes a convenient and effective manner for metabonomics study of biological systems.
Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24806938      PMCID: PMC4017288          DOI: 10.1016/j.bpj.2014.03.022

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  27 in total

1.  Resolution enhancement in in vivo NMR spectroscopy: detection of intermolecular zero-quantum coherences.

Authors:  Cornelius Faber; Eberhard Pracht; Axel Haase
Journal:  J Magn Reson       Date:  2003-04       Impact factor: 2.229

2.  NMR separation of intra- and extracellular compounds based on intermolecular coherences.

Authors:  Verena Hoerr; Armin Purea; Cornelius Faber
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

3.  Selective double quantum resolved correlation experiment for the complete separation of entire proton NMR spectra of enantiomers.

Authors:  Sankeerth Hebbar; Uday Ramesh Prabhu; N Suryaprakash
Journal:  J Magn Reson       Date:  2011-12-21       Impact factor: 2.229

4.  Measurement and applications of long-range heteronuclear scalar couplings: recent experimental and theoretical developments.

Authors:  Nilamoni Nath; Nagarajarao Suryaprakash
Journal:  Chemphyschem       Date:  2012-02-02       Impact factor: 3.102

5.  Metabonomic study on the biochemical response of spontaneously hypertensive rats to chronic taurine supplementation using (1)H NMR spectroscopic urinalysis.

Authors:  Kazuki Akira; Hiroyuki Hichiya; Mayu Morita; Akane Shimizu; Hidemichi Mitome
Journal:  J Pharm Biomed Anal       Date:  2013-07-26       Impact factor: 3.935

Review 6.  Two-dimensional J-resolved NMR spectroscopy: review of a key methodology in the metabolomics toolbox.

Authors:  Christian Ludwig; Mark R Viant
Journal:  Phytochem Anal       Date:  2010 Jan-Feb       Impact factor: 3.373

7.  Quantum treatment of intermolecular multiple-quantum coherences with intramolecular J coupling in solution NMR.

Authors:  S Ahn; W S Warren; S Lee
Journal:  J Magn Reson       Date:  1997-10       Impact factor: 2.229

8.  Analysis of biological fluids using 600 MHz proton NMR spectroscopy: application of homonuclear two-dimensional J-resolved spectroscopy to urine and blood plasma for spectral simplification and assignment.

Authors:  P J Foxall; J A Parkinson; I H Sadler; J C Lindon; J K Nicholson
Journal:  J Pharm Biomed Anal       Date:  1993-01       Impact factor: 3.935

9.  Homogeneous NMR spectra in inhomogeneous fields.

Authors:  S Vathyam; S Lee; W S Warren
Journal:  Science       Date:  1996-04-05       Impact factor: 47.728

10.  Efficacy of Withania somnifera on seminal plasma metabolites of infertile males: a proton NMR study at 800 MHz.

Authors:  Ashish Gupta; Abbas Ali Mahdi; Kamla Kant Shukla; Mohammad Kaleem Ahmad; Navneeta Bansal; Pushplata Sankhwar; Satya Narain Sankhwar
Journal:  J Ethnopharmacol       Date:  2013-06-21       Impact factor: 4.360

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  5 in total

1.  Spatially Localized Two-Dimensional J-Resolved NMR Spectroscopy via Intermolecular Double-Quantum Coherences for Biological Samples at 7 T.

Authors:  Chunhua Tan; Shuhui Cai; Yuqing Huang
Journal:  PLoS One       Date:  2015-07-24       Impact factor: 3.240

2.  A high-resolution 2D J-resolved NMR detection technique for metabolite analyses of biological samples.

Authors:  Yuqing Huang; Zhiyong Zhang; Hao Chen; Jianghua Feng; Shuhui Cai; Zhong Chen
Journal:  Sci Rep       Date:  2015-02-11       Impact factor: 4.379

3.  FoodPro: A Web-Based Tool for Evaluating Covariance and Correlation NMR Spectra Associated with Food Processes.

Authors:  Eisuke Chikayama; Ryo Yamashina; Keiko Komatsu; Yuuri Tsuboi; Kenji Sakata; Jun Kikuchi; Yasuyo Sekiyama
Journal:  Metabolites       Date:  2016-10-19

Review 4.  Natural Products as Modulators of Sirtuins.

Authors:  Berin Karaman Mayack; Wolfgang Sippl; Fidele Ntie-Kang
Journal:  Molecules       Date:  2020-07-20       Impact factor: 4.411

5.  Lipoprotein Subclasses Independently Contribute to Subclinical Variance of Microvascular and Macrovascular Health.

Authors:  Lukas Streese; Hansjörg Habisch; Arne Deiseroth; Justin Carrard; Denis Infanger; Arno Schmidt-Trucksäss; Tobias Madl; Henner Hanssen
Journal:  Molecules       Date:  2022-07-25       Impact factor: 4.927

  5 in total

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