Literature DB >> 24806226

A simple filtration technique for obtaining purified human chromosomes in suspension.

Mohammed Yusuf1, Neha Parmar1, Gurdeep K Bhella1, Ian K Robinson1.   

Abstract

Here we present a simple method for cleaning polyamine human mitotic chromosomes in solution. This was achieved by filtering intact (unburst) nuclei along with both large and small cytoplasmic debris through a series of different pore sized filters. Pure human chromosomes were recovered using a simple reverse filtration step. Fluorescence microscopy was used to validate the chromosome suspension after each filtration step. This reverse filtration technique is an improvement in both procedure time and chromosome recovery compared to currently used post-purification methods. Chromosomes purified by our method could be used for many applications, such as structural studies using microfluidics and high resolution imaging or generation of chromosome paints and sequencing after flow cytometry.

Entities:  

Keywords:  chromosome; cytoplasmic debris; filtration; mitotic; nuclei

Mesh:

Year:  2014        PMID: 24806226     DOI: 10.2144/000114168

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  6 in total

1.  Nuclear incorporation of iron during the eukaryotic cell cycle.

Authors:  Ian Robinson; Yang Yang; Fucai Zhang; Christophe Lynch; Mohammed Yusuf; Peter Cloetens
Journal:  J Synchrotron Radiat       Date:  2016-10-18       Impact factor: 2.616

2.  Pressurized DNA state inside herpes capsids-A novel antiviral target.

Authors:  Alberto Brandariz-Nuñez; Scott J Robinson; Alex Evilevitch
Journal:  PLoS Pathog       Date:  2020-07-23       Impact factor: 6.823

Review 3.  Use of 3D imaging for providing insights into high-order structure of mitotic chromosomes.

Authors:  Mohammed Yusuf; Kohei Kaneyoshi; Kiichi Fukui; Ian Robinson
Journal:  Chromosoma       Date:  2018-09-03       Impact factor: 4.316

4.  X-ray Ptychography Imaging of Human Chromosomes After Low-dose Irradiation.

Authors:  Archana Bhartiya; Darren Batey; Silvia Cipiccia; Xiaowen Shi; Christoph Rau; Stanley Botchway; Mohammed Yusuf; Ian K Robinson
Journal:  Chromosome Res       Date:  2021-03-31       Impact factor: 5.239

5.  Ultra-Structural Imaging Provides 3D Organization of 46 Chromosomes of a Human Lymphocyte Prophase Nucleus.

Authors:  Atiqa Sajid; El-Nasir Lalani; Bo Chen; Teruo Hashimoto; Darren K Griffin; Archana Bhartiya; George Thompson; Ian K Robinson; Mohammed Yusuf
Journal:  Int J Mol Sci       Date:  2021-06-01       Impact factor: 5.923

Review 6.  Challenges, Solutions, and Quality Metrics of Personal Genome Assembly in Advancing Precision Medicine.

Authors:  Wenming Xiao; Leihong Wu; Gokhan Yavas; Vahan Simonyan; Baitang Ning; Huixiao Hong
Journal:  Pharmaceutics       Date:  2016-04-22       Impact factor: 6.321

  6 in total

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