Literature DB >> 24795349

Genome-wide association study identifies variants in casein kinase II (CSNK2A2) to be associated with leukocyte telomere length in a Punjabi Sikh diabetic cohort.

Richa Saxena, Andrew Bjonnes, Jennifer Prescott, Patrick Dib, Praveen Natt, Jacqueline Lane, Megan Lerner, Jackie A Cooper, Yuanqing Ye, Ka Wah Li, Cécilia G Maubaret, Veryan Codd, Daniel Brackett, Lisa Mirabello, Peter Kraft, Colin P Dinney, Donald Stowell, Marvin Peyton, Sarju Ralhan, Gurpreet S Wander, Narinder K Mehra, Klelia D Salpea, Jian Gu, Xifeng Wu, Massimo Mangino, David J Hunter, Immaculata De Vivo, Steve E Humphries, Nilesh J Samani, Tim D Spector, Sharon A Savage, Dharambir K Sanghera.   

Abstract

BACKGROUND: Telomere length is a heritable trait, and short telomere length has been associated with multiple chronic diseases. We investigated the relationship of relative leukocyte telomere length with cardiometabolic risk and performed the first genome-wide association study and meta-analysis to identify variants influencing relative telomere length in a population of Sikhs from South Asia. METHODS AND
RESULTS: Our results revealed a significant independent association of shorter relative telomere length with type 2 diabetes mellitus and heart disease. Our discovery genome-wide association study (n=1616) was followed by stage 1 replication of 25 top signals (P<10(-6)) in an additional Sikhs (n=2397). On combined discovery and stage 1 meta-analysis (n= 4013), we identified a novel relative telomere length locus at chromosome 16q21 represented by an intronic variant (rs74019828) in the CSNK2A2 gene (β=-0.38; P=4.5×10(-8)). We further tested 3 top variants by genotyping in UK cardiovascular disease (UKCVD) (whites n=2952) for stage 2. Next, we performed in silico replication of 139 top signals (P<10(-5)) in UK Twin, Nurses Heart Study, Prostate, Lung, Colorectal, and Ovarian Cancer Screening Trial, and MD Anderson Cancer Controls (n=10 033) and joint meta-analysis (n=16 998). The observed signal in CSNK2A2 was confined to South Asians and could not be replicated in whites because of significant difference in allele frequencies (P<0.001). CSNK2A2 phosphorylates telomeric repeat binding factor 1 and plays an important role for regulation of telomere length homoeostasis.
CONCLUSIONS: By identification of a novel signal in telomere pathway genes, our study provides new molecular insight into the underlying mechanism that may regulate telomere length and its association with human aging and cardiometabolic pathophysiology.
© 2014 American Heart Association, Inc.

Entities:  

Keywords:  cardiovascular diseases; diabetes mellitus, type 2; genome-wide association study; telomere length

Mesh:

Substances:

Year:  2014        PMID: 24795349      PMCID: PMC4106467          DOI: 10.1161/CIRCGENETICS.113.000412

Source DB:  PubMed          Journal:  Circ Cardiovasc Genet        ISSN: 1942-3268


  53 in total

Review 1.  Protein kinase CK2: structure, regulation and role in cellular decisions of life and death.

Authors:  David W Litchfield
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2.  Mean leukocyte telomere length shortening and type 2 diabetes mellitus: a case-control study.

Authors:  Robert Y L Zee; Amy J Castonguay; Nathaniel S Barton; Soren Germer; Mitchell Martin
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3.  Casein kinase 2 Is activated and essential for Wnt/beta-catenin signaling.

Authors:  Yuan Gao; Hsien-yu Wang
Journal:  J Biol Chem       Date:  2006-05-03       Impact factor: 5.157

Review 4.  Telomere length in epidemiology: a biomarker of aging, age-related disease, both, or neither?

Authors:  Jason L Sanders; Anne B Newman
Journal:  Epidemiol Rev       Date:  2013-01-09       Impact factor: 6.222

5.  Telomere length and early severe social deprivation: linking early adversity and cellular aging.

Authors:  S S Drury; K Theall; M M Gleason; A T Smyke; I De Vivo; J Y Y Wong; N A Fox; C H Zeanah; C A Nelson
Journal:  Mol Psychiatry       Date:  2011-05-17       Impact factor: 15.992

6.  Association of shorter mean telomere length with large artery stiffness in patients with coronary heart disease.

Authors:  Yun-Ying Wang; Ai-Fang Chen; Hua-Zhang Wang; Li-Yan Xie; Ke-Xu Sui; Qi-Yi Zhang
Journal:  Aging Male       Date:  2010-11-10       Impact factor: 5.892

7.  Loss of telomeric DNA during aging of normal and trisomy 21 human lymphocytes.

Authors:  H Vaziri; F Schächter; I Uchida; L Wei; X Zhu; R Effros; D Cohen; C B Harley
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8.  Vitamin D Deficiency and Cardio-Metabolic Risk in a North Indian Community with Highly Prevalent Type 2 Diabetes.

Authors:  Timothy R Braun; Latonya F Been; Piers R Blackett; Dharambir K Sanghera
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9.  Genotype imputation with thousands of genomes.

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10.  Telomere length attrition, a marker of biological senescence, is inversely correlated with triglycerides and cholesterol in South Asian males with type 2 diabetes mellitus.

Authors:  Alison L Harte; Nancy F da Silva; Michelle A Miller; Francesco P Cappuccio; Ann Kelly; Joseph P O'Hare; Anthony H Barnett; Nasser M Al-Daghri; Omar Al-Attas; Majed Alokail; Shaun Sabico; Gyanendra Tripathi; Srikanth Bellary; Sudhesh Kumar; Philip G McTernan
Journal:  Exp Diabetes Res       Date:  2012-03-01
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  21 in total

1.  Association of APOE polymorphisms with diabetes and cardiometabolic risk factors and the role of APOE genotypes in response to anti-diabetic therapy: results from the AIDHS/SDS on a South Asian population.

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Review 2.  Telomeres, early-life stress and mental illness.

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3.  Vitamin D Status, Gender Differences, and Cardiometabolic Health Disparities.

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4.  Genetic determinants of telomere length from 109,122 ancestrally diverse whole-genome sequences in TOPMed.

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Journal:  Cell Genom       Date:  2022-01-13

5.  Genome-wide association study of 25(OH) Vitamin D concentrations in Punjabi Sikhs: Results of the Asian Indian diabetic heart study.

Authors:  Bishwa R Sapkota; Ruth Hopkins; Andrew Bjonnes; Sarju Ralhan; Gurpreet S Wander; Narinder K Mehra; Jai Rup Singh; Piers R Blackett; Richa Saxena; Dharambir K Sanghera
Journal:  J Steroid Biochem Mol Biol       Date:  2015-12-15       Impact factor: 4.292

Review 6.  Telomere length in different metabolic categories: Clinical associations and modification potential.

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Journal:  Exp Biol Med (Maywood)       Date:  2020-06-09

7.  Association Between Telomere Length and Risk of Cancer and Non-Neoplastic Diseases: A Mendelian Randomization Study.

Authors:  Philip C Haycock; Stephen Burgess; Aayah Nounu; Jie Zheng; George N Okoli; Jack Bowden; Kaitlin Hazel Wade; Nicholas J Timpson; David M Evans; Peter Willeit; Abraham Aviv; Tom R Gaunt; Gibran Hemani; Massimo Mangino; Hayley Patricia Ellis; Kathreena M Kurian; Karen A Pooley; Rosalind A Eeles; Jeffrey E Lee; Shenying Fang; Wei V Chen; Matthew H Law; Lisa M Bowdler; Mark M Iles; Qiong Yang; Bradford B Worrall; Hugh Stephen Markus; Rayjean J Hung; Chris I Amos; Amanda B Spurdle; Deborah J Thompson; Tracy A O'Mara; Brian Wolpin; Laufey Amundadottir; Rachael Stolzenberg-Solomon; Antonia Trichopoulou; N Charlotte Onland-Moret; Eiliv Lund; Eric J Duell; Federico Canzian; Gianluca Severi; Kim Overvad; Marc J Gunter; Rosario Tumino; Ulrika Svenson; Andre van Rij; Annette F Baas; Matthew J Bown; Nilesh J Samani; Femke N G van t'Hof; Gerard Tromp; Gregory T Jones; Helena Kuivaniemi; James R Elmore; Mattias Johansson; James Mckay; Ghislaine Scelo; Robert Carreras-Torres; Valerie Gaborieau; Paul Brennan; Paige M Bracci; Rachel E Neale; Sara H Olson; Steven Gallinger; Donghui Li; Gloria M Petersen; Harvey A Risch; Alison P Klein; Jiali Han; Christian C Abnet; Neal D Freedman; Philip R Taylor; John M Maris; Katja K Aben; Lambertus A Kiemeney; Sita H Vermeulen; John K Wiencke; Kyle M Walsh; Margaret Wrensch; Terri Rice; Clare Turnbull; Kevin Litchfield; Lavinia Paternoster; Marie Standl; Gonçalo R Abecasis; John Paul SanGiovanni; Yong Li; Vladan Mijatovic; Yadav Sapkota; Siew-Kee Low; Krina T Zondervan; Grant W Montgomery; Dale R Nyholt; David A van Heel; Karen Hunt; Dan E Arking; Foram N Ashar; Nona Sotoodehnia; Daniel Woo; Jonathan Rosand; Mary E Comeau; W Mark Brown; Edwin K Silverman; John E Hokanson; Michael H Cho; Jennie Hui; Manuel A Ferreira; Philip J Thompson; Alanna C Morrison; Janine F Felix; Nicholas L Smith; Angela M Christiano; Lynn Petukhova; Regina C Betz; Xing Fan; Xuejun Zhang; Caihong Zhu; Carl D Langefeld; Susan D Thompson; Feijie Wang; Xu Lin; David A Schwartz; Tasha Fingerlin; Jerome I Rotter; Mary Frances Cotch; Richard A Jensen; Matthias Munz; Henrik Dommisch; Arne S Schaefer; Fang Han; Hanna M Ollila; Ryan P Hillary; Omar Albagha; Stuart H Ralston; Chenjie Zeng; Wei Zheng; Xiao-Ou Shu; Andre Reis; Steffen Uebe; Ulrike Hüffmeier; Yoshiya Kawamura; Takeshi Otowa; Tsukasa Sasaki; Martin Lloyd Hibberd; Sonia Davila; Gang Xie; Katherine Siminovitch; Jin-Xin Bei; Yi-Xin Zeng; Asta Försti; Bowang Chen; Stefano Landi; Andre Franke; Annegret Fischer; David Ellinghaus; Carlos Flores; Imre Noth; Shwu-Fan Ma; Jia Nee Foo; Jianjun Liu; Jong-Won Kim; David G Cox; Olivier Delattre; Olivier Mirabeau; Christine F Skibola; Clara S Tang; Merce Garcia-Barcelo; Kai-Ping Chang; Wen-Hui Su; Yu-Sun Chang; Nicholas G Martin; Scott Gordon; Tracey D Wade; Chaeyoung Lee; Michiaki Kubo; Pei-Chieng Cha; Yusuke Nakamura; Daniel Levy; Masayuki Kimura; Shih-Jen Hwang; Steven Hunt; Tim Spector; Nicole Soranzo; Ani W Manichaikul; R Graham Barr; Bratati Kahali; Elizabeth Speliotes; Laura M Yerges-Armstrong; Ching-Yu Cheng; Jost B Jonas; Tien Yin Wong; Isabella Fogh; Kuang Lin; John F Powell; Kenneth Rice; Caroline L Relton; Richard M Martin; George Davey Smith
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9.  Shortened leukocyte telomere length in type 2 diabetes mellitus: genetic polymorphisms in mitochondrial uncoupling proteins and telomeric pathways.

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Journal:  Clin Transl Med       Date:  2016-03-07

10.  Identification of Key Pathways and Genes in Obesity Using Bioinformatics Analysis and Molecular Docking Studies.

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