Literature DB >> 24793761

mRNA quality control at the 5' end.

Li-ting Zhai1, Song Xiang.   

Abstract

All eukaryotic mRNAs are capped at their 5' end. Capping of mRNAs takes place co-transcriptionally and involves three steps. The intermediates of the capping process, as well as the uncapped 5' tri-phosphate RNA, are resistant to decapping and degradation by known factors, leading to the assumption that the capping process always proceeds to completion. This view was recently drastically changed. A novel family of enzymes, including the yeast proteins Rai1, Dxo1/Ydr370C, and the mammalian protein DXO/Dom3Z, has been identified. These enzymes catalyze the conversion of the improperly capped mRNAs to 5' mono-phosphate RNA, allowing them to be degraded by 5'-3' exoribonucleases. Several of these enzymes also possess 5'-3' exoribonuclease activities themselves, and can single-handedly clear the improperly capped mRNAs. Studying of these enzymes has led to the realization that mRNA capping does not always proceed to completion, and the identification of an mRNA capping quality control mechanism in eukaryotes. In this paper, we briefly review recent advances in this area.

Entities:  

Keywords:  DXO; Dxo1; Quality control; Rai1; mRNA capping

Mesh:

Substances:

Year:  2014        PMID: 24793761      PMCID: PMC4076600          DOI: 10.1631/jzus.B1400070

Source DB:  PubMed          Journal:  J Zhejiang Univ Sci B        ISSN: 1673-1581            Impact factor:   3.066


  32 in total

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3.  Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively.

Authors:  A W Johnson
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

4.  The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif.

Authors:  T Dunckley; R Parker
Journal:  EMBO J       Date:  1999-10-01       Impact factor: 11.598

5.  Myc Regulation of mRNA Cap Methylation.

Authors:  Victoria H Cowling; Michael D Cole
Journal:  Genes Cancer       Date:  2010-06

6.  The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.

Authors:  Minkyu Kim; Nevan J Krogan; Lidia Vasiljeva; Oliver J Rando; Eduard Nedea; Jack F Greenblatt; Stephen Buratowski
Journal:  Nature       Date:  2004-11-25       Impact factor: 49.962

7.  Identification of a quality-control mechanism for mRNA 5'-end capping.

Authors:  Xinfu Jiao; Song Xiang; Chanseok Oh; Charles E Martin; Liang Tong; Megerditch Kiledjian
Journal:  Nature       Date:  2010-08-29       Impact factor: 49.962

8.  5'-exonuclease-2 of Saccharomyces cerevisiae. Purification and features of ribonuclease activity with comparison to 5'-exonuclease-1.

Authors:  A Stevens; T L Poole
Journal:  J Biol Chem       Date:  1995-07-07       Impact factor: 5.157

9.  The hDcp2 protein is a mammalian mRNA decapping enzyme.

Authors:  Zuoren Wang; Xinfu Jiao; Anne Carr-Schmid; Megerditch Kiledjian
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-06       Impact factor: 11.205

10.  The Myc transactivation domain promotes global phosphorylation of the RNA polymerase II carboxy-terminal domain independently of direct DNA binding.

Authors:  Victoria H Cowling; Michael D Cole
Journal:  Mol Cell Biol       Date:  2007-01-22       Impact factor: 4.272

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  9 in total

1.  Transcription: the epicenter of gene expression.

Authors:  Jiannan Guo
Journal:  J Zhejiang Univ Sci B       Date:  2014-05       Impact factor: 3.066

Review 2.  mRNA stability in the nucleus.

Authors:  Han Liu; Min Luo; Ji-kai Wen
Journal:  J Zhejiang Univ Sci B       Date:  2014-05       Impact factor: 3.066

3.  Arabidopsis DXO1 possesses deNADding and exonuclease activities and its mutation affects defense-related and photosynthetic gene expression.

Authors:  Shuying Pan; Kai-En Li; Wei Huang; Huan Zhong; Huihui Wu; Yuan Wang; He Zhang; Zongwei Cai; Hongwei Guo; Xuemei Chen; Yiji Xia
Journal:  J Integr Plant Biol       Date:  2019-11-07       Impact factor: 7.061

Review 4.  New insights into decapping enzymes and selective mRNA decay.

Authors:  Ewa Grudzien-Nogalska; Megerditch Kiledjian
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-07-17       Impact factor: 9.957

Review 5.  Writing a wrong: Coupled RNA polymerase II transcription and RNA quality control.

Authors:  Sarah A Peck; Katlyn D Hughes; Jose F Victorino; Amber L Mosley
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-03-07       Impact factor: 9.957

Review 6.  An RNA Metabolism and Surveillance Quartet in the Major Histocompatibility Complex.

Authors:  Danlei Zhou; Michalea Lai; Aiqin Luo; Chack-Yung Yu
Journal:  Cells       Date:  2019-08-30       Impact factor: 6.600

Review 7.  The Epitranscriptome in miRNAs: Crosstalk, Detection, and Function in Cancer.

Authors:  Daniel Del Valle-Morales; Patricia Le; Michela Saviana; Giulia Romano; Giovanni Nigita; Patrick Nana-Sinkam; Mario Acunzo
Journal:  Genes (Basel)       Date:  2022-07-21       Impact factor: 4.141

8.  Interplay of mRNA capping and transcription machineries.

Authors:  Zaur M Kachaev; Lyubov A Lebedeva; Eugene N Kozlov; Yulii V Shidlovskii
Journal:  Biosci Rep       Date:  2020-01-31       Impact factor: 3.840

Review 9.  mRNA Metabolism in Cardiac Development and Disease: Life After Transcription.

Authors:  Chen Gao; Yibin Wang
Journal:  Physiol Rev       Date:  2019-11-21       Impact factor: 37.312

  9 in total

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