| Literature DB >> 24790085 |
Sylwia M Figarska1, Judith M Vonk1, H Marike Boezen2.
Abstract
The nuclear factor (erythroid-derived 2)-like 2 (NFE2L2 or NRF2) gene regulates transcription of enzymes involved in cellular detoxification and lipids homeostasis. NFE2L2 is associated with pathophysiology of atherosclerosis and chronic obstructive pulmonary disease (COPD). Therefore we studied the relation between NFE2L2 and all-cause, cardiovascular, and COPD mortality and its associations with triglyceride and cholesterol levels. We genotyped five tagging single nucleotide polymorphisms (SNPs) (rs4243387, rs2364723, rs13001694, rs1806649, and rs6726395) in NFE2L2 in 1,390 subjects from the Vlagtwedde-Vlaardingen cohort. Participants were examined in 1989/1990 and followed up till the vital status evaluation on December 31st, 2008. Associations between SNPs and mortality were estimated by Cox proportional hazards regression, and associations between SNPs and triglyceride and cholesterol levels were tested with linear regression. After 18 yr, 284 (20.4%) subjects had died, 107 from cardiovascular disease and 20 from COPD. Minor allele carriers of rs13001694 had a significantly reduced risk of all-cause mortality compared with wild types: hazard ratio (HR) 0.8 [95% confidence interval (CI) 0.6 to 1.0]. Minor allele carriers of rs2364723 had significantly reduced risk of cardiovascular mortality: HR = 0.5 (95% CI: 0.3-0.7). This result was consistent in stratified analyses: females 0.4 (0.2-0.7), males 0.6 (0.3-0.9), never smokers 0.5 (0.2-1.1), ever smokers 0.5 (0.3-0.8). Minor allele carriers of rs1806649 had a markedly reduced COPD mortality: HR = 0.3 (95% CI: 0.1-0.9). Rs2364723 was associated with lower triglyceride levels. None of the SNPs was associated with cholesterol levels. This study shows for the first time that NFE2L2 is associated with reduced risk of all-cause, cardiovascular and COPD mortality in humans.Entities:
Keywords: COPD mortality; NFE2L2; all-cause mortality; cardiovascular mortality; general population
Mesh:
Substances:
Year: 2014 PMID: 24790085 PMCID: PMC4060038 DOI: 10.1152/physiolgenomics.00178.2013
Source DB: PubMed Journal: Physiol Genomics ISSN: 1094-8341 Impact factor: 3.107
ICD codes for the investigated causes of death
| Cause of Death | ICD-9 | ICD-10 |
|---|---|---|
| External causes | ≥ 800 | S, T, V, W, X, Y |
| CVD | 390–398, 401–405, 410–417, 420–438, 440–448, 451–459, 785.4 | G45–G46, I00–I15, I20–I28, I30–I52, I60–I69, I70–I79, I80–I89, I95–I97, I98.2, I98.8, I99, M30–M31, N28.0, R02, R58 |
| COPD | 490–492, 494, 496 | J40–J44, J47 |
Suicides, homicides, traffic accidents, etc.
ICD, International Classification of Diseases; CVD cardiovascular disease; COPD, chronic obstructive pulmonary disease.
Fig. 1.Position of genotyped single nucleotide polymorphisms (SNPs) in the nuclear factor (erythroid-derived 2)-like 2 (NFE2L2) gene and linkage disequilibrium plot (100·r2) in the Vlagtwedde-Vlaardingen cohort. The black boxes represent exons.
Characteristics of participants at visit 1989/1990 by vital status on Dec. 31st, 2008
| Status on 31 Dec. 2008 | Alive | Deceased | |
|---|---|---|---|
| 1,087 (78.2) | 284 (20.4) | ||
| Men | 525 (48.3) | 178 (62.7) | <0.001 |
| Vlagtwedde | 981 (90.2) | 258 (90.8) | 0.761 |
| Age at last status, yr | 68.4 (54.2–90.8) | 72.6 (41.4–87.4) | <0.001 |
| Ever smokers | 711 (65.4) | 219 (77.1) | <0.001 |
| Pack-years in ever smokers | 17.2 (0.1–117.1) | 27.1 (0.6–262.2) | <0.001 |
| FEV1 % predicted | 94.6 (13.9) | 84.3 (18.0) | <0.001 |
| Causes of death | |||
| CVD | 107 (37.7) | ||
| COPD | 20 (7.0) | ||
| External causes | 14 (4.9) | ||
| Other causes | 149 (52.5) |
All variables are expressed as number (%) or mean (SD) or median (range) as appropriate. FEV1, forced expiratory volume in 1 second.
Either as primary or secondary cause of death: 6 subjects had both CVD and COPD as primary and secondary cause of death.
Distribution of genotypes and HR for all-cause, CVD, and COPD mortality
| SNP | Genotype | Alive | Deceased | CVD Deceased | COPD Deceased | All-cause Mortality HR (95% CI) | Cardiovascular Mortality HR (95% CI) | COPD Mortality HR (95% CI) |
|---|---|---|---|---|---|---|---|---|
| rs4243387 | TT | 898 (85.0) | 238 (85.3) | 84 (80.0) | 19 (95.0) | |||
| TC+CC | 158 (15.0) | 41 (14.7) | 21 (20.0) | 1 (5.0) | 0.96 (0.67–1.37) | 1.52 (0.93–2.47) | 0.42 (0.06–3.23) | |
| rs2364723 | GG | 481 (46.1) | 117 (41.9) | 60 (56.6) | 6 (30.0) | |||
| GC+CC | 562 (53.9) | 162 (58.1) | 46 (43.4) | 14 (70.0) | 0.96 (0.74–1.25) | 0.49 (0.33–0.74) | 1.46 (0.45–4.72) | |
| rs13001694 | AA | 354 (33.7) | 117 (42.4) | 40 (38.5) | 9 (45.0) | |||
| AG+GG | 697 (66.3) | 159 (57.6) | 64 (61.5) | 11 (55.0) | 0.77 (0.59–1.00) | 0.89 (0.58–1.34) | 0.47 (0.18–1.24) | |
| rs1806649 | CC | 549 (53.8) | 153 (57.5) | 55 (54.5) | 12 (66.7) | |||
| CT+TT | 471 (46.2) | 113 (42.5) | 46 (45.5) | 6 (33.3) | 0.94 (0.72–1.22) | 0.96 (0.63–1.46) | 0.26 (0.08–0.89) | |
| rs6726395 | GG | 305 (28.9) | 95 (34.4) | 29 (27.4) | 9 (45.0) | |||
| GA+AA | 751 (71.1) | 181 (65.6) | 77 (72.6) | 11 (55.0) | 0.89 (0.67–1.17) | 1.23 (0.78–1.94) | 0.48 (0.18–1.28) |
HR, hazard ratio; CI, confidence interval.
P < 0.05.
Distribution of genotypes and HR for all-cause and cardiovascular mortality stratified according to sex
| Women | Men | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP | Genotype | Alive | Deceased | CVD Deceased | All-cause Mortality HR (95% CI) | CVD Mortality HR (95% CI) | Alive | Deceased | CVD Deceased | All-cause Mortality HR (95% CI) | CVD Mortality HR (95% CI) |
| rs4243387 | TT | 467 (86.5) | 93 (88.6) | 33 (82.5) | 431 (83.5) | 145 (83.3) | 51 (78.5) | ||||
| TC+CC | 73 (13.5) | 12 (11.4) | 7 (17.5) | 0.96 (0.51–1.81) | 1.71 (0.75–3.91) | 85 (16.5) | 29 (16.7) | 14 (21.5) | 0.98 (0.63–1.51) | 1.47 (0.81–2.70) | |
| rs2364723 | GG | 257 (47.9) | 44 (41.9) | 26 (65.0) | 224 (44.2) | 73 (42.0) | 34 (51.5) | ||||
| GC+CC | 279 (52.1) | 61 (58.1) | 14 (35.0) | 0.91 (0.59-1.39) | 0.35 (0.17-0.70) | 283 (55.8) | 101 (58.0) | 32 (48.5) | 0.95 (0.68–1.33) | 0.56 (0.33–0.93) | |
| rs13001694 | AA | 180 (33.1) | 40 (39.2) | 12 (31.6) | 174 (34.3) | 77 (44.3) | 28 (42.4) | ||||
| AG+GG | 364 (66.9) | 62 (60.8) | 26 (68.4) | 0.83 (0.54-1.28) | 1.25 (0.60-2.61) | 333 (65.7) | 97 (55.7) | 38 (57.6) | 0.77 (0.55-1.07) | 0.78 (0.47-1.31) | |
| rs1806649 | CC | 290 (54.7) | 54 (54.0) | 20 (52.6) | 259 (52.9) | 99 (59.6) | 35 (55.6) | ||||
| CT+TT | 240 (45.3) | 46 (46.0) | 18 (47.4) | 1.25 (0.82–1.92) | 1.23 (0.62–2.44) | 231 (47.1) | 67 (40.4) | 28 (44.4) | 0.82 (0.58–1.15) | 0.89 (0.53–1.50) | |
| rs6726395 | GG | 162 (29.5) | 35 (34.0) | 10 (25.0) | 143 (28.2) | 60 (34.7) | 19 (28.8) | ||||
| GA+AA | 387 (70.5) | 68 (66.0) | 30 (75.0) | 0.86 (0.55–1.33) | 1.44 (0.67–3.09) | 364 (71.8) | 113 (65.3) | 47 (71.2) | 0.93 (0.65–1.32) | 1.17 (0.66–2.07) | |
SNP, single nucleotide polymorphism.
P < 0.05.
Distribution of genotypes and HR for all-cause and cardiovascular mortality stratified according to smoking habits
| Never Smokers | Ever Smokers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP | Genotype | Alive | Deceased | CVD Deceased | All-cause Mortality HR (95% CI) | CVD Mortality HR (95% CI) | Alive | Deceased | CVD Deceased | All-cause Mortality HR (95% CI) | CVD Mortality HR (95% CI) |
| rs4243387 | TT | 313 (87.2) | 55 (87.3) | 21 (84.0) | 585 (83.9) | 183 (84.7) | 63 (78.8) | ||||
| TC+CC | 46 (12.8) | 8 (12.7) | 4 (16.0) | 0.93 (0.40–2.19) | 1.59 (0.53–4.71) | 112 (16.1) | 33 (15.3) | 17 (21.2) | 0.99 (0.66–1.47) | 1.53 (0.89–2.66) | |
| rs2364723 | GG | 161 (45.2) | 29 (45.3) | 16 (61.5) | 320 (46.6) | 88 (40.9) | 44 (55.0) | ||||
| GC+CC | 195 (54.8) | 35 (54.7) | 10 (38.5) | 0.88 (0.51–1.53) | 0.46 (0.20–1.07) | 367 (53.4) | 127 (59.1) | 36 (45.0) | 0.96 (0.71–1.29) | 0.50 (0.31–0.79) | |
| rs13001694 | AA | 128 (35.9) | 18 (28.6) | 6 (25.0) | 226 (32.6) | 99 (46.5) | 34 (42.5) | ||||
| AG+GG | 229 (64.1) | 45 (71.4) | 18 (75.0) | 1.10 (0.61–2.00) | 1.57 (0.57–4.33) | 468 (67.4) | 114 (53.5) | 46 (57.5) | 0.71 (0.53–0.95) | 0.80 (0.50–1.27) | |
| rs1806649 | CC | 199 (56.2) | 32 (51.6) | 12 (48.0) | 350 (52.6) | 121 (59.3) | 43 (56.6) | ||||
| CT+TT | 155 (43.8) | 30 (48.4) | 13 (52.0) | 1.47 (0.84–2.55) | 1.44 (0.62–3.33) | 316 (47.4) | 83 (40.7) | 33 (43.4) | 0.84 (0.62–1.14) | 0.86 (0.53–1.39) | |
| rs6726395 | GG | 112 (30.9) | 16 (25.8) | 6 (23.1) | 193 (27.8) | 79 (36.9) | 23 (28.8) | ||||
| GA+AA | 250 (69.1) | 46 (74.2) | 20 (76.9) | 1.12 (0.60–2.09) | 1.49 (0.55–4.04) | 501 (72.2) | 135 (63.1) | 57 (71.2) | 0.85 (0.62–1.15) | 1.19 (0.71–2.00) | |
P < 0.05.
Fig. 2.Survival curves for all-cause mortality according to SNP rs13001694. Cum, cumulative; HR, hazard ratio.
Fig. 3.Survival curves for cardiovascular mortality according to SNP rs2364723.
Fig. 4.Survival curves for chronic obstructive pulmonary disease (COPD) mortality according to SNP rs1806649.
Estimated effects of the NFE2L2 genetic variation on Ln-transformed triglyceride and cholesterol levels
| Triglyceride Levels | Cholesterol Levels | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| SNP | Genotype | B | SE | B | SE | ||||
| rs4243387 | TT | 400 | 345 | ||||||
| TC+CC | 83 | 0.015 | 0.056 | 0.783 | 76 | −0.020 | 0.023 | 0.397 | |
| rs2364723 | GG | 218 | 184 | ||||||
| GC+CC | 259 | −0.084 | 0.043 | 0.050 | 231 | −0.006 | 0.018 | 0.756 | |
| rs13001694 | AA | 176 | 164 | ||||||
| AG+GG | 299 | 0.110 | 0.044 | 0.013 | 249 | 0.026 | 0.019 | 0.172 | |
| rs1806649 | CC | 254 | 227 | ||||||
| CT+TT | 205 | 0.113 | 0.043 | 0.009 | 174 | 0.003 | 0.019 | 0.875 | |
| rs6726395 | GG | 142 | 130 | ||||||
| GA+AA | 336 | 0.107 | 0.047 | 0.022 | 288 | 0.014 | 0.020 | 0.486 | |
Regression coefficient (B), its standard error (SE), and P value obtained with linear regression analysis adjusted for age at the measurement.