Literature DB >> 24787840

Optically-sectioned two-shot structured illumination microscopy with Hilbert-Huang processing.

Krzysztof Patorski, Maciej Trusiak, Tomasz Tkaczyk.   

Abstract

We introduce a fast, simple, adaptive and experimentally robust method for reconstructing background-rejected optically-sectioned images using two-shot structured illumination microscopy. Our innovative data demodulation method needs two grid-illumination images mutually phase shifted by π (half a grid period) but precise phase displacement between two frames is not required. Upon frames subtraction the input pattern with increased grid modulation is obtained. The first demodulation stage comprises two-dimensional data processing based on the empirical mode decomposition for the object spatial frequency selection (noise reduction and bias term removal). The second stage consists in calculating high contrast image using the two-dimensional spiral Hilbert transform. Our algorithm effectiveness is compared with the results calculated for the same input data using structured-illumination (SIM) and HiLo microscopy methods. The input data were collected for studying highly scattering tissue samples in reflectance mode. Results of our approach compare very favorably with SIM and HiLo techniques.

Mesh:

Year:  2014        PMID: 24787840      PMCID: PMC4083048          DOI: 10.1364/OE.22.009517

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  24 in total

1.  Natural demodulation of two-dimensional fringe patterns. I. General background of the spiral phase quadrature transform.

Authors:  K G Larkin; D J Bone; M A Oldfield
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2001-08       Impact factor: 2.129

2.  Real-time vital optical imaging of precancer using anti-epidermal growth factor receptor antibodies conjugated to gold nanoparticles.

Authors:  Konstantin Sokolov; Michele Follen; Jesse Aaron; Ina Pavlova; Anais Malpica; Reuben Lotan; Rebecca Richards-Kortum
Journal:  Cancer Res       Date:  2003-05-01       Impact factor: 12.701

Review 3.  Optical sectioning microscopy.

Authors:  José-Angel Conchello; Jeff W Lichtman
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

4.  Image formation in structured illumination wide-field fluorescence microscopy.

Authors:  Dejan Karadaglić; Tony Wilson
Journal:  Micron       Date:  2008-02-02       Impact factor: 2.251

5.  Image restoration method based on Hilbert transform for full-field optical coherence tomography.

Authors:  Jihoon Na; Woo June Choi; Eun Seo Choi; Seon Young Ryu; Byeong Ha Lee
Journal:  Appl Opt       Date:  2008-01-20       Impact factor: 1.980

6.  Wide-field fluorescence sectioning with hybrid speckle and uniform-illumination microscopy.

Authors:  Daryl Lim; Kengyeh K Chu; Jerome Mertz
Journal:  Opt Lett       Date:  2008-08-15       Impact factor: 3.776

7.  Highly contrasted Bessel fringe minima visualization for time-averaged vibration profilometry using Hilbert transform two-frame processing.

Authors:  Krzysztof Patorski; Maciej Trusiak
Journal:  Opt Express       Date:  2013-07-15       Impact factor: 3.894

8.  Optically sectioned fluorescence endomicroscopy with hybrid-illumination imaging through a flexible fiber bundle.

Authors:  Silvia Santos; Kengyeh K Chu; Daryl Lim; Nenad Bozinovic; Tim N Ford; Claire Hourtoule; Aaron C Bartoo; Satish K Singh; Jerome Mertz
Journal:  J Biomed Opt       Date:  2009 May-Jun       Impact factor: 3.170

9.  High resolution, molecular-specific, reflectance imaging in optically dense tissue phantoms with structured-illumination.

Authors:  Tomasz Tkaczyk; Mohammed Rahman; Vivian Mack; Konstantin Sokolov; Jeremy Rogers; Rebecca Richards-Kortum; Michael Descour
Journal:  Opt Express       Date:  2004-08-09       Impact factor: 3.894

10.  Quantitative sectioning and noise analysis for structured illumination microscopy.

Authors:  Nathan Hagen; Liang Gao; Tomasz S Tkaczyk
Journal:  Opt Express       Date:  2012-01-02       Impact factor: 3.894

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  3 in total

1.  Double-exposure optical sectioning structured illumination microscopy based on Hilbert transform reconstruction.

Authors:  Xing Zhou; Ming Lei; Dan Dan; Baoli Yao; Jia Qian; Shaohui Yan; Yanlong Yang; Junwei Min; Tong Peng; Tong Ye; Guangde Chen
Journal:  PLoS One       Date:  2015-03-23       Impact factor: 3.240

2.  A concept for single-shot volumetric fluorescence imaging via orthogonally polarized excitation lattices.

Authors:  Florian Ströhl; Clemens F Kaminski
Journal:  Sci Rep       Date:  2019-04-23       Impact factor: 4.379

3.  Single-shot two-frame π-shifted spatially multiplexed interference phase microscopy.

Authors:  Maciej Trusiak; Jose-Angel Picazo-Bueno; Krzysztof Patorski; Piotr Zdańkowski; Vicente Mico
Journal:  J Biomed Opt       Date:  2019-09       Impact factor: 3.170

  3 in total

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