Literature DB >> 24786592

Evolution and communication of subcellular compartments: An integrated approach.

Stefanie J Mueller1, Ralf Reski2.   

Abstract

Compartmentation is a fundamental feature of eukaryotic cells and the basis for metabolic complexity. We recently reported on the protein compartmentation in the moss Physcomitrella patens. This study utilized a combination of quantitative proteomics, comparative genomics, and single protein tagging and provided data on the postendosymbiotic evolution of plastids and mitochondria, on organellar communication, as well as on inter- and intracellular heterogeneity of organelles. We highlight potential organelle interaction hubs with specific protein content such as plastid stromules, and report on the plasticity of protein targeting to organelles.

Entities:  

Keywords:  Chloroplasts; metabolic compartmentation; mitochondria; moss; organelle connectivity; quantitative proteomics; stromules

Year:  2014        PMID: 24786592      PMCID: PMC4091571     

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  25 in total

Review 1.  Ancient invasions: from endosymbionts to organelles.

Authors:  Sabrina D Dyall; Mark T Brown; Patricia J Johnson
Journal:  Science       Date:  2004-04-09       Impact factor: 47.728

Review 2.  Mosaic origin of the mitochondrial proteome.

Authors:  Radek Szklarczyk; Martijn A Huynen
Journal:  Proteomics       Date:  2010-11-03       Impact factor: 3.984

Review 3.  Plant organellar protein targeting: a traffic plan still under construction.

Authors:  Sally A Mackenzie
Journal:  Trends Cell Biol       Date:  2005-10       Impact factor: 20.808

Review 4.  Evolutionary origins of metabolic compartmentalization in eukaryotes.

Authors:  William Martin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-03-12       Impact factor: 6.237

5.  Transorganellar complementation redefines the biochemical continuity of endoplasmic reticulum and chloroplasts.

Authors:  Payam Mehrshahi; Giovanni Stefano; Joshua Michael Andaloro; Federica Brandizzi; John E Froehlich; Dean DellaPenna
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

6.  An improved and highly standardised transformation procedure allows efficient production of single and multiple targeted gene-knockouts in a moss, Physcomitrella patens.

Authors:  Annette Hohe; Tanja Egener; Jan M Lucht; Hauke Holtorf; Christina Reinhard; Gabriele Schween; Ralf Reski
Journal:  Curr Genet       Date:  2003-10-29       Impact factor: 3.886

7.  A chloroplast retrograde signal regulates nuclear alternative splicing.

Authors:  Ezequiel Petrillo; Micaela A Godoy Herz; Armin Fuchs; Dominik Reifer; John Fuller; Marcelo J Yanovsky; Craig Simpson; John W S Brown; Andrea Barta; Maria Kalyna; Alberto R Kornblihtt
Journal:  Science       Date:  2014-04-10       Impact factor: 47.728

8.  Phytozome: a comparative platform for green plant genomics.

Authors:  David M Goodstein; Shengqiang Shu; Russell Howson; Rochak Neupane; Richard D Hayes; Joni Fazo; Therese Mitros; William Dirks; Uffe Hellsten; Nicholas Putnam; Daniel S Rokhsar
Journal:  Nucleic Acids Res       Date:  2011-11-22       Impact factor: 16.971

9.  The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.

Authors:  Ron Caspi; Hartmut Foerster; Carol A Fulcher; Pallavi Kaipa; Markus Krummenacker; Mario Latendresse; Suzanne Paley; Seung Y Rhee; Alexander G Shearer; Christophe Tissier; Thomas C Walk; Peifen Zhang; Peter D Karp
Journal:  Nucleic Acids Res       Date:  2007-10-27       Impact factor: 16.971

10.  Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions.

Authors:  Andreas D Zimmer; Daniel Lang; Karol Buchta; Stephane Rombauts; Tomoaki Nishiyama; Mitsuyasu Hasebe; Yves Van de Peer; Stefan A Rensing; Ralf Reski
Journal:  BMC Genomics       Date:  2013-07-23       Impact factor: 3.969

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  4 in total

1.  Discovery and Characterization of the 3-Hydroxyacyl-ACP Dehydratase Component of the Plant Mitochondrial Fatty Acid Synthase System.

Authors:  Xin Guan; Yozo Okazaki; Andrew Lithio; Ling Li; Xuefeng Zhao; Huanan Jin; Dan Nettleton; Kazuki Saito; Basil J Nikolau
Journal:  Plant Physiol       Date:  2017-02-15       Impact factor: 8.340

2.  The Arabidopsis phytohormone crosstalk network involves a consecutive metabolic route and circular control units of transcription factors that regulate enzyme-encoding genes.

Authors:  Xun Yue; Xing Guo Li; Xin-Qi Gao; Xiang Yu Zhao; Yu Xiu Dong; Chao Zhou
Journal:  BMC Syst Biol       Date:  2016-09-02

3.  Plastid Envelope-Localized Proteins Exhibit a Stochastic Spatiotemporal Relationship to Stromules.

Authors:  Kathleen Delfosse; Michael R Wozny; Kiah A Barton; Neeta Mathur; Nigel Griffiths; Jaideep Mathur
Journal:  Front Plant Sci       Date:  2018-06-04       Impact factor: 5.753

4.  Cytological analysis and structural quantification of FtsZ1-2 and FtsZ2-1 network characteristics in Physcomitrella patens.

Authors:  Bugra Özdemir; Pouyan Asgharzadeh; Annette I Birkhold; Stefanie J Mueller; Oliver Röhrle; Ralf Reski
Journal:  Sci Rep       Date:  2018-07-24       Impact factor: 4.379

  4 in total

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