Literature DB >> 24785076

de Gennes narrowing describes the relative motion of protein domains.

Liang Hong1, Nikolai Smolin2, Jeremy C Smith1.   

Abstract

The relative motion of structural domains is essential for the biological function of many proteins. Here, by analyzing neutron scattering data and performing molecular dynamics simulations, we find that interdomain motion in several proteins obeys the principle of de Gennes narrowing, in which the wave vector dependence of the interdomain diffusion coefficient is inversely proportional to the interdomain structure factor. Thus, the rate of interdomain motion is inversely proportional to the probability distribution of the spatial configurations of domains.

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Year:  2014        PMID: 24785076     DOI: 10.1103/PhysRevLett.112.158102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  7 in total

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Authors:  Bela Farago; Iain D Nicholl; Shen Wang; Xiaolin Cheng; David J E Callaway; Zimei Bu
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Journal:  Protein Sci       Date:  2017-02-14       Impact factor: 6.725

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Journal:  Chem Sci       Date:  2022-03-28       Impact factor: 9.825

5.  Non-ergodicity of a globular protein extending beyond its functional timescale.

Authors:  Jun Li; JingFei Xie; Aljaž Godec; Keith R Weninger; Cong Liu; Jeremy C Smith; Liang Hong
Journal:  Chem Sci       Date:  2022-08-04       Impact factor: 9.969

6.  Water Dynamics in Shewanella oneidensis at Ambient and High Pressure using Quasi-Elastic Neutron Scattering.

Authors:  Fabrizia Foglia; Rachael Hazael; Giovanna G Simeoni; Marie-Sousai Appavou; Martine Moulin; Michael Haertlein; V Trevor Forsyth; Tilo Seydel; Isabelle Daniel; Filip Meersman; Paul F McMillan
Journal:  Sci Rep       Date:  2016-01-07       Impact factor: 4.379

7.  Determination of functional collective motions in a protein at atomic resolution using coherent neutron scattering.

Authors:  Liang Hong; Nitin Jain; Xiaolin Cheng; Ana Bernal; Madhusudan Tyagi; Jeremy C Smith
Journal:  Sci Adv       Date:  2016-10-14       Impact factor: 14.136

  7 in total

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