Literature DB >> 24783979

Allosteric transition induced by Mg²⁺ ion in a transactivator monitored by SERS.

Partha P Kundu1, Tuhin Bhowmick, Ganduri Swapna, G V Pavan Kumar, Valakunja Nagaraja, Chandrabhas Narayana.   

Abstract

We demonstrate the utility of the surface-enhanced Raman spectroscopy (SERS) to monitor conformational transitions in protein upon ligand binding. The changes in protein's secondary and tertiary structures were monitored using amide and aliphatic/aromatic side chain vibrations. Changes in these bands are suggestive of the stabilization of the secondary and tertiary structure of transcription activator protein C in the presence of Mg(2+) ion, whereas the spectral fingerprint remained unaltered in the case of a mutant protein, defective in Mg(2+) binding. The importance of the acidic residues in Mg(2+) binding, which triggers an overall allosteric transition in the protein, is visualized in the molecular model. The present study thus opens up avenues toward the application of SERS as a potential tool for gaining structural insights into the changes occurring during conformational transitions in proteins.

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Year:  2014        PMID: 24783979     DOI: 10.1021/jp5000733

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  1 in total

1.  Reproducible and label-free biosensor for the selective extraction and rapid detection of proteins in biological fluids.

Authors:  Arumugam Sivanesan; Emad L Izake; Roland Agoston; Godwin A Ayoko; Martin Sillence
Journal:  J Nanobiotechnology       Date:  2015-06-24       Impact factor: 10.435

  1 in total

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