| Literature DB >> 24783979 |
Partha P Kundu1, Tuhin Bhowmick, Ganduri Swapna, G V Pavan Kumar, Valakunja Nagaraja, Chandrabhas Narayana.
Abstract
We demonstrate the utility of the surface-enhanced Raman spectroscopy (SERS) to monitor conformational transitions in protein upon ligand binding. The changes in protein's secondary and tertiary structures were monitored using amide and aliphatic/aromatic side chain vibrations. Changes in these bands are suggestive of the stabilization of the secondary and tertiary structure of transcription activator protein C in the presence of Mg(2+) ion, whereas the spectral fingerprint remained unaltered in the case of a mutant protein, defective in Mg(2+) binding. The importance of the acidic residues in Mg(2+) binding, which triggers an overall allosteric transition in the protein, is visualized in the molecular model. The present study thus opens up avenues toward the application of SERS as a potential tool for gaining structural insights into the changes occurring during conformational transitions in proteins.Entities:
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Year: 2014 PMID: 24783979 DOI: 10.1021/jp5000733
Source DB: PubMed Journal: J Phys Chem B ISSN: 1520-5207 Impact factor: 2.991