Literature DB >> 24781189

Proteomic analysis of cerebrospinal fluid: toward the identification of biomarkers for gliomas.

Fang Shen1, Yang Zhang, Yu Yao, Wei Hua, Hai-Shi Zhang, Jing-Song Wu, Ping Zhong, Liang-Fu Zhou.   

Abstract

Gliomas are the most common primary brain tumors in adults and, despite advances in the understandings of glioma pathogenesis in the genetic era, they are still ineradicable, justifying the need to develop more reliable diagnostic and prognostic biomarkers for this malignancy. Because changes in cerebrospinal fluid (CSF) are suggested to be capable of sensitively reflecting pathological processes, e.g., neoplastic conditions, in the central nervous system, CSF has been deemed a valuable source for potential biomarkers screening in this era of proteomics. This systematic review focused on the proteomic analysis of glioma CSF that has been published to date and identified a total of 19 differentially expressed proteins. Further functional and protein-protein interaction assessments were performed by using Protein Analysis Through Evolutionary Relationships (PANTHER) website and Ingenuity Pathway Analysis (IPA) software, which revealed several important protein networks (e.g., IL-6/STAT-3) and four novel focus proteins (IL-6, galanin (GAL), HSPA5, and WNT4) that might be involved in glioma pathogenesis. The concentrations of these focus proteins were subsequently determined by enzyme-linked immunosorbent assay (ELISA) in an independent set of CSF and tumor cyst fluid (CF) samples. Specifically, glioblastoma (GBM) CF had significantly lower GAL, HSPA5, and WNT4 levels than CSF from different grades of glioma. In contrast, IL-6 level was significantly higher in GBM CF when compared with CSF and, among different CSF groups, was highest in GBM CSF. Therefore, these candidate protein biomarkers, identified from both the literatures and in silico analysis, may have potentials in clinical diagnosis, prognosis evaluation, treatment response monitoring, and novel therapeutic targets identification for patients with glioma.

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Year:  2014        PMID: 24781189     DOI: 10.1007/s10143-014-0539-5

Source DB:  PubMed          Journal:  Neurosurg Rev        ISSN: 0344-5607            Impact factor:   3.042


  91 in total

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Authors:  Federico Odreman; Marco Vindigni; Marlen Lujardo Gonzales; Benedetta Niccolini; Giovanni Candiano; Bruno Zanotti; Miran Skrap; Stefano Pizzolitto; Giorgio Stanta; Alessandro Vindigni
Journal:  J Proteome Res       Date:  2005 May-Jun       Impact factor: 4.466

3.  Biomarker discovery: a proteomic approach for brain cancer profiling.

Authors:  Ashraf A Khalil; Peter James
Journal:  Cancer Sci       Date:  2007-02       Impact factor: 6.716

4.  Chromogenic in situ hybridization accurately identifies EGFR amplification in small cell glioblastoma multiforme, a common subtype of primary GBM.

Authors:  M Quezado; R Ronchetti; A Rapkiewicz; M Santi; D T Blumenthal; E J Rushing
Journal:  Clin Neuropathol       Date:  2005 Jul-Aug       Impact factor: 1.368

5.  Galanin and galanin receptors in human gliomas.

Authors:  Alexandra Berger; Radmila Santic; Dietmar Almer; Cornelia Hauser-Kronberger; Michael Huemer; Christian Humpel; Günther Stockhammer; Wolfgang Sperl; Barbara Kofler
Journal:  Acta Neuropathol       Date:  2003-02-26       Impact factor: 17.088

Review 6.  Interleukins in glioblastoma pathophysiology: implications for therapy.

Authors:  Y T Yeung; K L McDonald; T Grewal; L Munoz
Journal:  Br J Pharmacol       Date:  2013-02       Impact factor: 8.739

7.  Multifarious proteomic signatures and regional heterogeneity in glioblastomas.

Authors:  Chul-Kee Park; Ji Hye Jung; Sung-Hye Park; Hee-Won Jung; Byung-Kyu Cho
Journal:  J Neurooncol       Date:  2009-02-15       Impact factor: 4.130

8.  Moving toward molecular classification of diffuse gliomas in adults.

Authors:  Brett J Theeler; W K Alfred Yung; Gregory N Fuller; John F De Groot
Journal:  Neurology       Date:  2012-10-30       Impact factor: 9.910

9.  High levels of phosphorylated MAP kinase are associated with poor survival among patients with glioblastoma during the temozolomide era.

Authors:  Chirag G Patil; Miriam Nuño; Adam Elramsisy; Debraj Mukherjee; Christine Carico; Jocelynn Dantis; Jethro Hu; John S Yu; Xuemo Fan; Keith L Black; Serguei I Bannykh
Journal:  Neuro Oncol       Date:  2012-10-31       Impact factor: 12.300

10.  Combining two biomarkers, IDH1/2 mutations and 1p/19q codeletion, to stratify anaplastic oligodendroglioma in three groups: a single-center experience.

Authors:  J S Frenel; C Leux; D Loussouarn; A-G Le Loupp; F Leclair; M Aumont; A Mervoyer; S Martin; M G Denis; M Campone
Journal:  J Neurooncol       Date:  2013-05-17       Impact factor: 4.506

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  21 in total

Review 1.  The potential of cerebrospinal fluid-based liquid biopsy approaches in CNS tumors.

Authors:  Austin K Mattox; Hai Yan; Chetan Bettegowda
Journal:  Neuro Oncol       Date:  2019-12-17       Impact factor: 12.300

2.  Electrochemical biosensing of circulating microRNA-21 in cerebrospinal fluid of medulloblastoma patients through target-induced redox signal amplification.

Authors:  Chen Wang; Yujie Liu; Ruoping Chen; Xiaoqiang Wang; Yunkun Wang; Jia Wei; Kun Zhang; Chenran Zhang
Journal:  Mikrochim Acta       Date:  2022-02-14       Impact factor: 6.408

Review 3.  Liquid biopsy: early and accurate diagnosis of brain tumor.

Authors:  Zhenjie Yi; Chunrun Qu; Yu Zeng; Zhixiong Liu
Journal:  J Cancer Res Clin Oncol       Date:  2022-04-22       Impact factor: 4.322

Review 4.  Liquid Biomarkers for Improved Diagnosis and Classification of CNS Tumors.

Authors:  Severa Bunda; Jeffrey A Zuccato; Mathew R Voisin; Justin Z Wang; Farshad Nassiri; Vikas Patil; Sheila Mansouri; Gelareh Zadeh
Journal:  Int J Mol Sci       Date:  2021-04-27       Impact factor: 5.923

5.  Differentially expressed proteins in glioblastoma multiforme identified with a nanobody-based anti-proteome approach and confirmed by OncoFinder as possible tumor-class predictive biomarker candidates.

Authors:  Ivana Jovčevska; Neja Zupanec; Žiga Urlep; Andrej Vranič; Boštjan Matos; Clara Limbaeck Stokin; Serge Muyldermans; Michael P Myers; Anton A Buzdin; Ivan Petrov; Radovan Komel
Journal:  Oncotarget       Date:  2017-07-04

6.  Proteomic analysis of cerebrospinal fluid from children with central nervous system tumors identifies candidate proteins relating to tumor metastatic spread.

Authors:  Filippo Spreafico; Italia Bongarzone; Sara Pizzamiglio; Ruben Magni; Elena Taverna; Maida De Bortoli; Chiara M Ciniselli; Elena Barzanò; Veronica Biassoni; Alessandra Luchini; Lance A Liotta; Weidong Zhou; Michele Signore; Paolo Verderio; Maura Massimino
Journal:  Oncotarget       Date:  2017-07-11

Review 7.  The emerging insights into catalytic or non-catalytic roles of TET proteins in tumors and neural development.

Authors:  Hao Lian; Wen-Bin Li; Wei-Lin Jin
Journal:  Oncotarget       Date:  2016-09-27

8.  Exosomal miR-1246 from glioma patient body fluids drives the differentiation and activation of myeloid-derived suppressor cells.

Authors:  Wei Qiu; Xiaofan Guo; Boyan Li; Jian Wang; Yanhua Qi; Zihang Chen; Rongrong Zhao; Lin Deng; Mingyu Qian; Shaobo Wang; Zongpu Zhang; Qindong Guo; Shouji Zhang; Ziwen Pan; Shulin Zhao; Hao Xue; Gang Li
Journal:  Mol Ther       Date:  2021-07-02       Impact factor: 11.454

9.  Alpha 1-antichymotrypsin contributes to stem cell characteristics and enhances tumorigenicity of glioblastoma.

Authors:  Montserrat Lara-Velazquez; Natanael Zarco; Anna Carrano; Jordan Phillipps; Emily S Norton; Paula Schiapparelli; Rawan Al-Kharboosh; Jordina Rincon-Torroella; Stephanie Jeanneret; Teresa Corona; Jose Segovia; Mark E Jentoft; Kaisorn L Chaichana; Yan W Asmann; Alfredo Quiñones-Hinojosa; Hugo Guerrero-Cazares
Journal:  Neuro Oncol       Date:  2021-04-12       Impact factor: 12.300

10.  Blocking epithelial-to-mesenchymal transition in glioblastoma with a sextet of repurposed drugs: the EIS regimen.

Authors:  Richard E Kast; Nicolas Skuli; Georg Karpel-Massler; Guido Frosina; Timothy Ryken; Marc-Eric Halatsch
Journal:  Oncotarget       Date:  2017-06-01
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